RNA–Protein interactions for RNA: ENST00000497947.6

LMO7-213, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-213ENST00000497947 LRPPRCP42704 1394 aaKnown RBP11.99□□□□□ -0.49
LMO7-213ENST00000497947 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
LMO7-213ENST00000497947 ANKRD50Q9ULJ7 1429 aa11.98□□□□□ -0.49
LMO7-213ENST00000497947 MYBBP1AQ9BQG0 1328 aaKnown RBP11.98□□□□□ -0.49
LMO7-213ENST00000497947 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.49
LMO7-213ENST00000497947 JCADQ9P266 1359 aa11.97□□□□□ -0.49
LMO7-213ENST00000497947 TMEM2Q9UHN6 1383 aa11.97□□□□□ -0.49
LMO7-213ENST00000497947 TMC1Q8TDI8 760 aa11.97□□□□□ -0.49
LMO7-213ENST00000497947 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
LMO7-213ENST00000497947 SLAIN2Q9P270 581 aa11.97□□□□□ -0.49
LMO7-213ENST00000497947 ZNF772Q68DY9 489 aaPredicted RBP11.96□□□□□ -0.49
LMO7-213ENST00000497947 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
LMO7-213ENST00000497947 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
LMO7-213ENST00000497947 UBR1Q8IWV7 1749 aa11.96□□□□□ -0.49
LMO7-213ENST00000497947 EIF2AK4Q9P2K8 1649 aaKnown RBP11.96□□□□□ -0.5
LMO7-213ENST00000497947 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
LMO7-213ENST00000497947 TCERG1O14776 1098 aaKnown RBP11.95□□□□□ -0.5
LMO7-213ENST00000497947 CHRDL2Q6WN34 429 aa11.95□□□□□ -0.5
LMO7-213ENST00000497947 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
LMO7-213ENST00000497947 MS4A1P11836 297 aa11.94□□□□□ -0.5
LMO7-213ENST00000497947 XIRP1Q702N8 1843 aaKnown RBP11.94□□□□□ -0.5
LMO7-213ENST00000497947 MSH6P52701 1360 aa11.93□□□□□ -0.5
LMO7-213ENST00000497947 SPATA31A6Q5VVP1 1343 aa11.93□□□□□ -0.5
LMO7-213ENST00000497947 RTL5Q5HYW3 569 aaPredicted RBP11.93□□□□□ -0.5
LMO7-213ENST00000497947 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
LMO7-213ENST00000497947 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
LMO7-213ENST00000497947 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
LMO7-213ENST00000497947 ROBO1Q9Y6N7 1651 aa11.93□□□□□ -0.5
LMO7-213ENST00000497947 DEKP35659 375 aaKnown RBP11.92□□□□□ -0.5
LMO7-213ENST00000497947 CARD11Q9BXL7 1154 aa11.92□□□□□ -0.5
LMO7-213ENST00000497947 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
LMO7-213ENST00000497947 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
LMO7-213ENST00000497947 E9PCH4 1651 aa11.91□□□□□ -0.5
LMO7-213ENST00000497947 LAMC1P11047 1609 aa11.91□□□□□ -0.5
LMO7-213ENST00000497947 MEX3CQ5U5Q3 659 aaKnown RBP11.91□□□□□ -0.5
LMO7-213ENST00000497947 NLRP13Q86W25 1043 aa11.91□□□□□ -0.5
LMO7-213ENST00000497947 NUP155O75694 1391 aa11.91□□□□□ -0.5
LMO7-213ENST00000497947 NKTRP30414 1462 aaKnown RBP11.9□□□□□ -0.5
LMO7-213ENST00000497947 RXRBP28702 533 aa11.9□□□□□ -0.5
LMO7-213ENST00000497947 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
LMO7-213ENST00000497947 IDI1Q13907 227 aa11.9□□□□□ -0.5
LMO7-213ENST00000497947 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
LMO7-213ENST00000497947 KANK1Q14678 1352 aa11.9□□□□□ -0.5
LMO7-213ENST00000497947 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
LMO7-213ENST00000497947 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
LMO7-213ENST00000497947 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
LMO7-213ENST00000497947 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
LMO7-213ENST00000497947 DUOX2Q9NRD8 1548 aa11.89□□□□□ -0.51
LMO7-213ENST00000497947 TET3O43151 1660 aa11.88□□□□□ -0.51
LMO7-213ENST00000497947 KDM5AP29375 1690 aaKnown RBP11.88□□□□□ -0.51
LMO7-213ENST00000497947 PARD3Q8TEW0 1356 aa11.88□□□□□ -0.51
LMO7-213ENST00000497947 CFAP65Q6ZU64 1925 aaKnown RBP11.88□□□□□ -0.51
LMO7-213ENST00000497947 EFCAB6Q5THR3 1501 aa11.87□□□□□ -0.51
LMO7-213ENST00000497947 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
LMO7-213ENST00000497947 GPRASP1Q5JY77 1395 aa11.87□□□□□ -0.51
LMO7-213ENST00000497947 ERBINQ96RT1 1412 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.516e-7■■□□□ 11.9
LMO7-213ENST00000497947 DDRGK1Q96HY6 314 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 SLC52A1Q9NWF4 448 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 PHLPP1O60346 1717 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 PIK3C2BO00750 1634 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
LMO7-213ENST00000497947 ZNF326Q5BKZ1 582 aaKnown RBP11.85□□□□□ -0.51
LMO7-213ENST00000497947 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
LMO7-213ENST00000497947 CEP152O94986 1710 aa11.85□□□□□ -0.51
LMO7-213ENST00000497947 LRP6O75581 1613 aa11.85□□□□□ -0.51
LMO7-213ENST00000497947 CDK12Q9NYV4 1490 aaPredicted RBP11.84□□□□□ -0.51
LMO7-213ENST00000497947 PPM1GO15355 546 aaPredicted RBP11.84□□□□□ -0.51
LMO7-213ENST00000497947 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
LMO7-213ENST00000497947 PRAG1Q86YV5 1406 aa11.84□□□□□ -0.51
LMO7-213ENST00000497947 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
LMO7-213ENST00000497947 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
LMO7-213ENST00000497947 C19orf44Q9H6X5 657 aa11.83□□□□□ -0.52
LMO7-213ENST00000497947 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
LMO7-213ENST00000497947 BLMP54132 1417 aaPredicted RBP11.83□□□□□ -0.52
LMO7-213ENST00000497947 COL16A1Q07092 1604 aaPredicted RBP11.82□□□□□ -0.52
LMO7-213ENST00000497947 ST20-MTHFSA0A0A6YYL1 179 aa11.82□□□□□ -0.52
LMO7-213ENST00000497947 ATF3P18847 181 aa11.82□□□□□ -0.52
LMO7-213ENST00000497947 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
LMO7-213ENST00000497947 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
LMO7-213ENST00000497947 UNC13BO14795 1591 aa11.81□□□□□ -0.52
LMO7-213ENST00000497947 NOS1P29475 1434 aa11.81□□□□□ -0.52
LMO7-213ENST00000497947 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
LMO7-213ENST00000497947 PLEKHG1Q9ULL1 1385 aa11.8□□□□□ -0.52
LMO7-213ENST00000497947 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
LMO7-213ENST00000497947 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
LMO7-213ENST00000497947 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
LMO7-213ENST00000497947 LMTK2Q8IWU2 1503 aa11.8□□□□□ -0.52
LMO7-213ENST00000497947 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
LMO7-213ENST00000497947 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
LMO7-213ENST00000497947 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
LMO7-213ENST00000497947 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
LMO7-213ENST00000497947 AFF2P51816 1311 aa11.79□□□□□ -0.52
LMO7-213ENST00000497947 PDE4AP27815 886 aa11.78□□□□□ -0.52
LMO7-213ENST00000497947 VASPP50552 380 aaPredicted RBP11.78□□□□□ -0.52
LMO7-213ENST00000497947 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.78□□□□□ -0.52
LMO7-213ENST00000497947 BACH2Q9BYV9 841 aa11.78□□□□□ -0.52
LMO7-213ENST00000497947 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 243.7 ms