RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 PSEN2P49810 448 aa10.61□□□□□ -0.71
PAXBP1-209ENST00000497873 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.6□□□□□ -0.71
PAXBP1-209ENST00000497873 C6orf229H3BNL8 230 aa10.6□□□□□ -0.71
PAXBP1-209ENST00000497873 EPS8L1Q8TE68 723 aa10.6□□□□□ -0.71
PAXBP1-209ENST00000497873 PBXIP1Q96AQ6 731 aa10.6□□□□□ -0.71
PAXBP1-209ENST00000497873 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
PAXBP1-209ENST00000497873 FUT2Q10981 343 aa10.59□□□□□ -0.71
PAXBP1-209ENST00000497873 HDGFP51858 240 aaKnown RBP10.58□□□□□ -0.72
PAXBP1-209ENST00000497873 CFAP70Q5T0N1 1121 aa10.58□□□□□ -0.72
PAXBP1-209ENST00000497873 GZF1Q9H116 711 aaPredicted RBP10.58□□□□□ -0.72
PAXBP1-209ENST00000497873 SYMPKQ92797 1274 aaKnown RBP10.58□□□□□ -0.72
PAXBP1-209ENST00000497873 SNPHO15079 494 aa10.57□□□□□ -0.72
PAXBP1-209ENST00000497873 RABGEF1Q9UJ41 708 aa10.57□□□□□ -0.72
PAXBP1-209ENST00000497873 PPP1R12CQ9BZL4 782 aa10.56□□□□□ -0.72
PAXBP1-209ENST00000497873 PDE4CQ08493 712 aa10.55□□□□□ -0.72
PAXBP1-209ENST00000497873 GRIPAP1Q4V328 841 aa10.55□□□□□ -0.72
PAXBP1-209ENST00000497873 ALG2Q9H553 416 aa10.55□□□□□ -0.72
PAXBP1-209ENST00000497873 CFHP08603 1231 aa10.54□□□□□ -0.72
PAXBP1-209ENST00000497873 SLC4A3P48751 1232 aa10.54□□□□□ -0.72
PAXBP1-209ENST00000497873 TMCO4Q5TGY1 634 aa10.54□□□□□ -0.72
PAXBP1-209ENST00000497873 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
PAXBP1-209ENST00000497873 NR6A1Q15406 480 aa10.53□□□□□ -0.72
PAXBP1-209ENST00000497873 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
PAXBP1-209ENST00000497873 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
PAXBP1-209ENST00000497873 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
PAXBP1-209ENST00000497873 PRR7Q8TB68 274 aa10.53□□□□□ -0.72
PAXBP1-209ENST00000497873 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
PAXBP1-209ENST00000497873 RNF40O75150 1001 aa10.52□□□□□ -0.73
PAXBP1-209ENST00000497873 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
PAXBP1-209ENST00000497873 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
PAXBP1-209ENST00000497873 CSB-PGBD3P0DP91 1061 aa10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 ATP6V1AP38606 617 aa10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 AXIN2Q9Y2T1 843 aa10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 PER1O15534 1290 aaPredicted RBP10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 TFIP11Q9UBB9 837 aaKnown RBP10.51□□□□□ -0.73
PAXBP1-209ENST00000497873 UCN2Q96RP3 112 aa10.5□□□□□ -0.73
PAXBP1-209ENST00000497873 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
PAXBP1-209ENST00000497873 SLC4A5Q9BY07 1137 aa10.48□□□□□ -0.73
PAXBP1-209ENST00000497873 MFAP1P55081 439 aaKnown RBP10.47□□□□□ -0.73
PAXBP1-209ENST00000497873 SEMA3FQ13275 785 aa10.47□□□□□ -0.73
PAXBP1-209ENST00000497873 USTQ9Y2C2 406 aa10.47□□□□□ -0.73
PAXBP1-209ENST00000497873 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
PAXBP1-209ENST00000497873 VARS2Q5ST30 1063 aaKnown RBP10.46□□□□□ -0.73
PAXBP1-209ENST00000497873 RGS22Q8NE09 1264 aa10.46□□□□□ -0.73
PAXBP1-209ENST00000497873 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
PAXBP1-209ENST00000497873 BRD1O95696 1058 aa10.46□□□□□ -0.74
PAXBP1-209ENST00000497873 VPS9D1Q9Y2B5 631 aa10.46□□□□□ -0.74
PAXBP1-209ENST00000497873 ERBB3P21860 1342 aa10.46□□□□□ -0.74
PAXBP1-209ENST00000497873 SOX11P35716 441 aa10.45□□□□□ -0.74
PAXBP1-209ENST00000497873 RETREG3Q86VR2 466 aa10.45□□□□□ -0.74
PAXBP1-209ENST00000497873 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
PAXBP1-209ENST00000497873 TBC1D9Q6ZT07 1266 aa10.44□□□□□ -0.74
PAXBP1-209ENST00000497873 SLC27A5Q9Y2P5 690 aa10.44□□□□□ -0.74
PAXBP1-209ENST00000497873 MORN1Q5T089 497 aa10.43□□□□□ -0.74
PAXBP1-209ENST00000497873 PNMA1Q8ND90 353 aa10.43□□□□□ -0.74
PAXBP1-209ENST00000497873 PATL2C9JE40 543 aaKnown RBP10.42□□□□□ -0.74
PAXBP1-209ENST00000497873 KCNA1Q09470 495 aa10.42□□□□□ -0.74
PAXBP1-209ENST00000497873 MAFBQ9Y5Q3 323 aaPredicted RBP10.42□□□□□ -0.74
PAXBP1-209ENST00000497873 LAPTM4BQ86VI4 370 aa10.41□□□□□ -0.74
PAXBP1-209ENST00000497873 ZFRQ96KR1 1074 aaKnown RBP10.41□□□□□ -0.74
PAXBP1-209ENST00000497873 EIF4G2P78344 907 aaKnown RBP eCLIP10.41□□□□□ -0.74
PAXBP1-209ENST00000497873 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
PAXBP1-209ENST00000497873 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.75
PAXBP1-209ENST00000497873 FOXD4L4Q8WXT5 416 aaPredicted RBP10.4□□□□□ -0.75
PAXBP1-209ENST00000497873 ATG7O95352 703 aa10.39□□□□□ -0.75
PAXBP1-209ENST00000497873 Q3C1V9 767 aa10.39□□□□□ -0.75
PAXBP1-209ENST00000497873 DESI1Q6ICB0 168 aa10.39□□□□□ -0.75
PAXBP1-209ENST00000497873 LYPD8Q6UX82 237 aa10.39□□□□□ -0.75
PAXBP1-209ENST00000497873 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
PAXBP1-209ENST00000497873 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
PAXBP1-209ENST00000497873 RNF19BQ6ZMZ0 732 aa10.38□□□□□ -0.75
PAXBP1-209ENST00000497873 TMEM88BA6NKF7 163 aa10.37□□□□□ -0.75
PAXBP1-209ENST00000497873 BHMG1C9JSJ3 638 aaPredicted RBP10.37□□□□□ -0.75
PAXBP1-209ENST00000497873 ATP9BO43861 1147 aa10.37□□□□□ -0.75
PAXBP1-209ENST00000497873 FBXO45P0C2W1 286 aa10.37□□□□□ -0.75
PAXBP1-209ENST00000497873 NR1H3Q13133 447 aa10.37□□□□□ -0.75
PAXBP1-209ENST00000497873 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
PAXBP1-209ENST00000497873 PBX2P40425 430 aa10.36□□□□□ -0.75
PAXBP1-209ENST00000497873 IVNS1ABPQ9Y6Y0 642 aa10.36□□□□□ -0.75
PAXBP1-209ENST00000497873 PIK3CDO00329 1044 aa10.35□□□□□ -0.75
PAXBP1-209ENST00000497873 LRCH3Q96II8 777 aa10.35□□□□□ -0.75
PAXBP1-209ENST00000497873 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
PAXBP1-209ENST00000497873 USB1Q9BQ65 265 aaKnown RBP10.35□□□□□ -0.75
PAXBP1-209ENST00000497873 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
PAXBP1-209ENST00000497873 FKBPLQ9UIM3 349 aa10.34□□□□□ -0.75
PAXBP1-209ENST00000497873 ZNF428Q96B54 188 aa10.33□□□□□ -0.76
PAXBP1-209ENST00000497873 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
PAXBP1-209ENST00000497873 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.33□□□□□ -0.76
PAXBP1-209ENST00000497873 KANK4Q5T7N3 995 aaPredicted RBP10.33□□□□□ -0.76
PAXBP1-209ENST00000497873 ZNF687Q8N1G0 1237 aa10.32□□□□□ -0.76
PAXBP1-209ENST00000497873 MAP10Q9P2G4 905 aa10.32□□□□□ -0.76
PAXBP1-209ENST00000497873 EMP3P54852 163 aa10.31□□□□□ -0.76
PAXBP1-209ENST00000497873 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
PAXBP1-209ENST00000497873 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
PAXBP1-209ENST00000497873 RBM25P49756 843 aaKnown RBP10.31□□□□□ -0.76
PAXBP1-209ENST00000497873 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
PAXBP1-209ENST00000497873 PRR14Q9BWN1 585 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms