RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 WAPLQ7Z5K2 1190 aa27.08■■□□□ 1.93
ATPAF2-209ENST00000497871 UPF1Q92900 1129 aaKnown RBP eCLIP27.08■■□□□ 1.93
ATPAF2-209ENST00000497871 LAMC1P11047 1609 aa27.08■■□□□ 1.93
ATPAF2-209ENST00000497871 LRPPRCP42704 1394 aaKnown RBP27.08■■□□□ 1.93
ATPAF2-209ENST00000497871 ADAMTS2O95450 1211 aa27.07■■□□□ 1.92
ATPAF2-209ENST00000497871 TMEM132EQ6IEE7 984 aa27.07■■□□□ 1.92
ATPAF2-209ENST00000497871 NGLY1Q96IV0 654 aa27.07■■□□□ 1.92
ATPAF2-209ENST00000497871 ABCC11Q96J66 1382 aa27.07■■□□□ 1.92
ATPAF2-209ENST00000497871 CDK12Q9NYV4 1490 aaPredicted RBP27.06■■□□□ 1.92
ATPAF2-209ENST00000497871 TECPR2O15040 1411 aa27.06■■□□□ 1.92
ATPAF2-209ENST00000497871 RBM6P78332 1123 aaKnown RBP27.05■■□□□ 1.92
ATPAF2-209ENST00000497871 NPHP3Q7Z494 1330 aa27.05■■□□□ 1.92
ATPAF2-209ENST00000497871 PIK3C2GO75747 1445 aa27.03■■□□□ 1.92
ATPAF2-209ENST00000497871 SIRT1Q96EB6 747 aa27.02■■□□□ 1.92
ATPAF2-209ENST00000497871 CDC42BPGQ6DT37 1551 aa27.01■■□□□ 1.92
ATPAF2-209ENST00000497871 FOXO3O43524 673 aa27.01■■□□□ 1.91
ATPAF2-209ENST00000497871 C14orf93Q9H972 538 aaKnown RBP27.01■■□□□ 1.91
ATPAF2-209ENST00000497871 NUTM2FA1L443 756 aa26.98■■□□□ 1.91
ATPAF2-209ENST00000497871 YTHDC2Q9H6S0 1430 aaKnown RBP26.98■■□□□ 1.91
ATPAF2-209ENST00000497871 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
ATPAF2-209ENST00000497871 FNBP4Q8N3X1 1017 aaPredicted RBP26.97■■□□□ 1.91
ATPAF2-209ENST00000497871 USP21Q9UK80 565 aa26.97■■□□□ 1.91
ATPAF2-209ENST00000497871 IFT172Q9UG01 1749 aa26.96■■□□□ 1.91
ATPAF2-209ENST00000497871 XPCQ01831 940 aaPredicted RBP26.94■■□□□ 1.9
ATPAF2-209ENST00000497871 CFAP70Q5T0N1 1121 aa26.94■■□□□ 1.9
ATPAF2-209ENST00000497871 TRPC5Q9UL62 973 aaPredicted RBP26.94■■□□□ 1.9
ATPAF2-209ENST00000497871 PXDNQ92626 1479 aa26.93■■□□□ 1.9
ATPAF2-209ENST00000497871 DHX57Q6P158 1386 aaKnown RBP26.93■■□□□ 1.9
ATPAF2-209ENST00000497871 RGS12O14924 1447 aa26.91■■□□□ 1.9
ATPAF2-209ENST00000497871 RAB3GAP2Q9H2M9 1393 aa26.91■■□□□ 1.9
ATPAF2-209ENST00000497871 NRXN1Q9ULB1 1477 aa26.91■■□□□ 1.9
ATPAF2-209ENST00000497871 MYOM2P54296 1465 aa26.9■■□□□ 1.9
ATPAF2-209ENST00000497871 COL22A1Q8NFW1 1626 aaPredicted RBP26.9■■□□□ 1.9
ATPAF2-209ENST00000497871 KNDC1Q76NI1 1749 aa26.89■■□□□ 1.9
ATPAF2-209ENST00000497871 KRT28Q7Z3Y7 464 aa26.85■■□□□ 1.89
ATPAF2-209ENST00000497871 PRAM1Q96QH2 718 aa26.85■■□□□ 1.89
ATPAF2-209ENST00000497871 SPATA31A3Q5VYP0 1347 aa26.85■■□□□ 1.89
ATPAF2-209ENST00000497871 ATRNO75882 1429 aa26.83■■□□□ 1.89
ATPAF2-209ENST00000497871 PHF8Q9UPP1 1060 aa26.83■■□□□ 1.89
ATPAF2-209ENST00000497871 HRCP23327 699 aa26.81■■□□□ 1.88
ATPAF2-209ENST00000497871 PSME1Q06323 249 aa26.81■■□□□ 1.88
ATPAF2-209ENST00000497871 SAFB2Q14151 953 aaKnown RBP eCLIP26.81■■□□□ 1.88
ATPAF2-209ENST00000497871 POGKQ9P215 609 aa26.81■■□□□ 1.88
ATPAF2-209ENST00000497871 FMN2Q9NZ56 1722 aa26.81■■□□□ 1.88
ATPAF2-209ENST00000497871 BCL9LQ86UU0 1499 aa26.81■■□□□ 1.88
ATPAF2-209ENST00000497871 STAC3Q96MF2 364 aa26.78■■□□□ 1.88
ATPAF2-209ENST00000497871 ATAD2Q6PL18 1390 aa26.78■■□□□ 1.88
ATPAF2-209ENST00000497871 GJD4Q96KN9 370 aaPredicted RBP26.77■■□□□ 1.88
ATPAF2-209ENST00000497871 KDM2AQ9Y2K7 1162 aa26.77■■□□□ 1.88
ATPAF2-209ENST00000497871 KIF1AQ12756 1690 aa26.76■■□□□ 1.87
ATPAF2-209ENST00000497871 DCAF11Q8TEB1 546 aa26.76■■□□□ 1.87
ATPAF2-209ENST00000497871 UNC5CLQ8IV45 518 aa26.75■■□□□ 1.87
ATPAF2-209ENST00000497871 DLC1Q96QB1 1528 aa26.75■■□□□ 1.87
ATPAF2-209ENST00000497871 TRAK1Q9UPV9 953 aa26.74■■□□□ 1.87
ATPAF2-209ENST00000497871 SBNO1A3KN83 1393 aa26.71■■□□□ 1.87
ATPAF2-209ENST00000497871 HAP1P54257 671 aaPredicted RBP26.71■■□□□ 1.87
ATPAF2-209ENST00000497871 TNS3Q68CZ2 1445 aa26.71■■□□□ 1.87
ATPAF2-209ENST00000497871 ADGRB1O14514 1584 aa26.71■■□□□ 1.87
ATPAF2-209ENST00000497871 PMFBP1Q8TBY8 1022 aa26.7■■□□□ 1.86
ATPAF2-209ENST00000497871 ANKARQ7Z5J8 1434 aa26.7■■□□□ 1.86
ATPAF2-209ENST00000497871 SLIT2O94813 1529 aa26.7■■□□□ 1.86
ATPAF2-209ENST00000497871 CABLES1Q8TDN4 633 aa26.69■■□□□ 1.86
ATPAF2-209ENST00000497871 LMOD2Q6P5Q4 547 aa26.68■■□□□ 1.86
ATPAF2-209ENST00000497871 MARF1Q9Y4F3 1742 aaKnown RBP26.68■■□□□ 1.86
ATPAF2-209ENST00000497871 HIRIP3Q9BW71 556 aaPredicted RBP26.67■■□□□ 1.86
ATPAF2-209ENST00000497871 ARHGEF10O15013 1369 aa26.67■■□□□ 1.86
ATPAF2-209ENST00000497871 CCDC125Q86Z20 511 aa26.66■■□□□ 1.86
ATPAF2-209ENST00000497871 MINK1Q8N4C8 1332 aaPredicted RBP26.65■■□□□ 1.86
ATPAF2-209ENST00000497871 RGPD8O14715 1765 aaPredicted RBP26.64■■□□□ 1.86
ATPAF2-209ENST00000497871 EIF3AQ14152 1382 aaKnown RBP26.64■■□□□ 1.86
ATPAF2-209ENST00000497871 WASLO00401 505 aaPredicted RBP26.64■■□□□ 1.86
ATPAF2-209ENST00000497871 PLEKHG5O94827 1062 aa26.63■■□□□ 1.85
ATPAF2-209ENST00000497871 RALGAPBQ86X10 1494 aa26.62■■□□□ 1.85
ATPAF2-209ENST00000497871 VPS72Q15906 364 aa26.62■■□□□ 1.85
ATPAF2-209ENST00000497871 ADGRB2O60241 1585 aa26.62■■□□□ 1.85
ATPAF2-209ENST00000497871 USP32Q8NFA0 1604 aa26.61■■□□□ 1.85
ATPAF2-209ENST00000497871 PRR36Q9H6K5 1346 aa26.61■■□□□ 1.85
ATPAF2-209ENST00000497871 GPRASP1Q5JY77 1395 aa26.6■■□□□ 1.85
ATPAF2-209ENST00000497871 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.59■■□□□ 1.85
ATPAF2-209ENST00000497871 FAM83GA6ND36 823 aa26.59■■□□□ 1.85
ATPAF2-209ENST00000497871 ONECUT3O60422 494 aaPredicted RBP26.57■■□□□ 1.84
ATPAF2-209ENST00000497871 NGDNQ8NEJ9 315 aaKnown RBP26.56■■□□□ 1.84
ATPAF2-209ENST00000497871 GLI3P10071 1580 aa26.55■■□□□ 1.84
ATPAF2-209ENST00000497871 SEPT12Q8IYM1 358 aa26.55■■□□□ 1.84
ATPAF2-209ENST00000497871 CCDC9Q9Y3X0 531 aaKnown RBP26.55■■□□□ 1.84
ATPAF2-209ENST00000497871 TULP4Q9NRJ4 1543 aa26.55■■□□□ 1.84
ATPAF2-209ENST00000497871 EP400Q96L91 3159 aa26.52■■□□□ 1.84
ATPAF2-209ENST00000497871 NUDT16Q96DE0 195 aaKnown RBP26.52■■□□□ 1.84
ATPAF2-209ENST00000497871 ZRANB1Q9UGI0 708 aa26.52■■□□□ 1.84
ATPAF2-209ENST00000497871 PAK3O75914 559 aaPredicted RBP26.5■■□□□ 1.83
ATPAF2-209ENST00000497871 BTG4Q9NY30 223 aa26.49■■□□□ 1.83
ATPAF2-209ENST00000497871 CDK19Q9BWU1 502 aa26.48■■□□□ 1.83
ATPAF2-209ENST00000497871 TRPM3Q9HCF6 1732 aaPredicted RBP26.47■■□□□ 1.83
ATPAF2-209ENST00000497871 NWD2Q9ULI1 1742 aa26.47■■□□□ 1.83
ATPAF2-209ENST00000497871 BLMP54132 1417 aaPredicted RBP26.47■■□□□ 1.83
ATPAF2-209ENST00000497871 KRT27Q7Z3Y8 459 aa26.46■■□□□ 1.83
ATPAF2-209ENST00000497871 ABCA3Q99758 1704 aa26.44■■□□□ 1.82
ATPAF2-209ENST00000497871 PLCH1Q4KWH8 1693 aa26.44■■□□□ 1.82
ATPAF2-209ENST00000497871 ATP7BP35670 1465 aa26.43■■□□□ 1.82
ATPAF2-209ENST00000497871 CCDC61Q9Y6R9 512 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms