RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 HELBQ8NG08 1087 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-221ENST00000497703 HLA-CQ95604 372 aa13.93□□□□□ -0.18
GARNL3-221ENST00000497703 PCDHGC3Q9UN70 934 aa13.93□□□□□ -0.18
GARNL3-221ENST00000497703 POTEMA6NI47 508 aa13.92□□□□□ -0.18
GARNL3-221ENST00000497703 PRM3Q9NNZ6 103 aa13.92□□□□□ -0.18
GARNL3-221ENST00000497703 RTL5Q5HYW3 569 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-221ENST00000497703 MORN1Q5T089 497 aa13.91□□□□□ -0.18
GARNL3-221ENST00000497703 TSC1Q92574 1164 aa13.91□□□□□ -0.18
GARNL3-221ENST00000497703 KCTD12Q96CX2 325 aaKnown RBP13.91□□□□□ -0.18
GARNL3-221ENST00000497703 PCDHB3Q9Y5E6 796 aa13.91□□□□□ -0.18
GARNL3-221ENST00000497703 PUS10Q3MIT2 529 aaKnown RBP13.9□□□□□ -0.18
GARNL3-221ENST00000497703 NR1I2O75469 434 aa13.88□□□□□ -0.19
GARNL3-221ENST00000497703 APLP1P51693 650 aa13.88□□□□□ -0.19
GARNL3-221ENST00000497703 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
GARNL3-221ENST00000497703 NYAP1Q6ZVC0 841 aa13.88□□□□□ -0.19
GARNL3-221ENST00000497703 WBP1LQ9NX94 342 aa13.87□□□□□ -0.19
GARNL3-221ENST00000497703 SLC27A5Q9Y2P5 690 aa13.87□□□□□ -0.19
GARNL3-221ENST00000497703 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-221ENST00000497703 RETREG3Q86VR2 466 aa13.85□□□□□ -0.19
GARNL3-221ENST00000497703 USP17L8P0C7I0 530 aa13.84□□□□□ -0.19
GARNL3-221ENST00000497703 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
GARNL3-221ENST00000497703 A6NJR5 290 aa13.82□□□□□ -0.2
GARNL3-221ENST00000497703 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
GARNL3-221ENST00000497703 SOCS7O14512 581 aa13.82□□□□□ -0.2
GARNL3-221ENST00000497703 FMNL1O95466 1100 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-221ENST00000497703 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
GARNL3-221ENST00000497703 PRR7Q8TB68 274 aa13.81□□□□□ -0.2
GARNL3-221ENST00000497703 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
GARNL3-221ENST00000497703 SCUBE3Q8IX30 993 aa13.8□□□□□ -0.2
GARNL3-221ENST00000497703 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
GARNL3-221ENST00000497703 CLUAP1Q96AJ1 413 aa13.8□□□□□ -0.2
GARNL3-221ENST00000497703 CFAP99D6REC4 459 aa13.79□□□□□ -0.2
GARNL3-221ENST00000497703 USB1Q9BQ65 265 aaKnown RBP13.79□□□□□ -0.2
GARNL3-221ENST00000497703 PTPN5P54829 565 aa13.78□□□□□ -0.2
GARNL3-221ENST00000497703 BLOC1S3Q6QNY0 202 aa13.78□□□□□ -0.2
GARNL3-221ENST00000497703 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.21
GARNL3-221ENST00000497703 MTMR14Q8NCE2 650 aa13.77□□□□□ -0.21
GARNL3-221ENST00000497703 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
GARNL3-221ENST00000497703 DESI1Q6ICB0 168 aa13.76□□□□□ -0.21
GARNL3-221ENST00000497703 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-221ENST00000497703 COPS2P61201 443 aa13.75□□□□□ -0.21
GARNL3-221ENST00000497703 BRICD5Q6PL45 260 aa13.74□□□□□ -0.21
GARNL3-221ENST00000497703 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
GARNL3-221ENST00000497703 COG6Q9Y2V7 657 aa13.74□□□□□ -0.21
GARNL3-221ENST00000497703 PCDH10Q9P2E7 1040 aa13.73□□□□□ -0.21
GARNL3-221ENST00000497703 NDUFB9Q9Y6M9 179 aa13.73□□□□□ -0.21
GARNL3-221ENST00000497703 PNMA1Q8ND90 353 aa13.72□□□□□ -0.21
GARNL3-221ENST00000497703 POM121Q96HA1 1249 aa13.72□□□□□ -0.21
GARNL3-221ENST00000497703 TRAK2O60296 914 aa13.71□□□□□ -0.21
GARNL3-221ENST00000497703 SPSB2Q99619 263 aa13.71□□□□□ -0.21
GARNL3-221ENST00000497703 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
GARNL3-221ENST00000497703 ABL2P42684 1182 aa13.69□□□□□ -0.22
GARNL3-221ENST00000497703 THAP11Q96EK4 314 aa13.69□□□□□ -0.22
GARNL3-221ENST00000497703 LRRN4Q8WUT4 740 aa13.68□□□□□ -0.22
GARNL3-221ENST00000497703 MTRQ99707 1265 aa13.67□□□□□ -0.22
GARNL3-221ENST00000497703 IL21Q9HBE4 155 aa13.67□□□□□ -0.22
GARNL3-221ENST00000497703 ZPR1O75312 459 aa13.66□□□□□ -0.22
GARNL3-221ENST00000497703 JUNDP17535 347 aa13.66□□□□□ -0.22
GARNL3-221ENST00000497703 MSS51Q4VC12 460 aa13.66□□□□□ -0.22
GARNL3-221ENST00000497703 LYPD8Q6UX82 237 aa13.66□□□□□ -0.22
GARNL3-221ENST00000497703 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
GARNL3-221ENST00000497703 HMX1Q9NP08 348 aaPredicted RBP13.65□□□□□ -0.22
GARNL3-221ENST00000497703 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
GARNL3-221ENST00000497703 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
GARNL3-221ENST00000497703 ADH1BP00325 375 aa13.63□□□□□ -0.23
GARNL3-221ENST00000497703 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
GARNL3-221ENST00000497703 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-221ENST00000497703 PTPRNQ16849 979 aa13.62□□□□□ -0.23
GARNL3-221ENST00000497703 FNBP4Q8N3X1 1017 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-221ENST00000497703 RNF166Q96A37 237 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-221ENST00000497703 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
GARNL3-221ENST00000497703 NR6A1Q15406 480 aa13.6□□□□□ -0.23
GARNL3-221ENST00000497703 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
GARNL3-221ENST00000497703 TRIM34Q9BYJ4 488 aa13.6□□□□□ -0.23
GARNL3-221ENST00000497703 CTHP32929 405 aa13.59□□□□□ -0.23
GARNL3-221ENST00000497703 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-221ENST00000497703 TLL1O43897 1013 aa13.58□□□□□ -0.24
GARNL3-221ENST00000497703 CCNYL3P0C7X3 344 aa13.58□□□□□ -0.24
GARNL3-221ENST00000497703 TJAP1Q5JTD0 557 aa13.58□□□□□ -0.24
GARNL3-221ENST00000497703 DXOO77932 396 aaKnown RBP13.57□□□□□ -0.24
GARNL3-221ENST00000497703 FAM160A2Q8N612 972 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-221ENST00000497703 NUDT12Q9BQG2 462 aa13.57□□□□□ -0.24
GARNL3-221ENST00000497703 SLC6A16Q9GZN6 736 aa13.57□□□□□ -0.24
GARNL3-221ENST00000497703 MMP16P51512 607 aa13.56□□□□□ -0.24
GARNL3-221ENST00000497703 ARMC2Q8NEN0 867 aa13.54□□□□□ -0.24
GARNL3-221ENST00000497703 EPS8L1Q8TE68 723 aa13.54□□□□□ -0.24
GARNL3-221ENST00000497703 SPNS2Q8IVW8 549 aa13.53□□□□□ -0.24
GARNL3-221ENST00000497703 ZNF516Q92618 1163 aa13.53□□□□□ -0.24
GARNL3-221ENST00000497703 CCDC97Q96F63 343 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-221ENST00000497703 PRDM9Q9NQV7 894 aa13.53□□□□□ -0.24
GARNL3-221ENST00000497703 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
GARNL3-221ENST00000497703 ARID3AQ99856 593 aa13.52□□□□□ -0.25
GARNL3-221ENST00000497703 F12P00748 615 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-221ENST00000497703 KCNC4Q03721 635 aa13.51□□□□□ -0.25
GARNL3-221ENST00000497703 EVA1BQ9NVM1 165 aa13.51□□□□□ -0.25
GARNL3-221ENST00000497703 MAP10Q9P2G4 905 aa13.51□□□□□ -0.25
GARNL3-221ENST00000497703 FKBPLQ9UIM3 349 aa13.51□□□□□ -0.25
GARNL3-221ENST00000497703 ZC3H4Q9UPT8 1303 aaKnown RBP13.5□□□□□ -0.25
GARNL3-221ENST00000497703 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
GARNL3-221ENST00000497703 CALR3Q96L12 384 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms