RNA–Protein interactions for RNA: ENST00000497403.5

GRHL1-208, Transcript of grainyhead like transcription factor 1, human

TSL 2

Gene GRHL1, Length 5,400 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRHL1-208	ENST00000497403	ABCA5	Q8WWZ7	1642 aa		14.11	□□□□□ -0.15
GRHL1-208	ENST00000497403	GOLGA6L4	A6NEF3	574 aa		14.11	□□□□□ -0.15
GRHL1-208	ENST00000497403	GPATCH8	Q9UKJ3	1502 aa	Known RBP	14.1	□□□□□ -0.15
GRHL1-208	ENST00000497403	SHANK2	Q9UPX8	1470 aa		14.1	□□□□□ -0.15
GRHL1-208	ENST00000497403	RIPK4	P57078	832 aa		14.1	□□□□□ -0.15
GRHL1-208	ENST00000497403	SLC26A8	Q96RN1	970 aa		14.1	□□□□□ -0.15
GRHL1-208	ENST00000497403	UHRF1BP1	Q6BDS2	1440 aa		14.1	□□□□□ -0.15
GRHL1-208	ENST00000497403	VPS37D	Q86XT2	251 aa		14.09	□□□□□ -0.15
GRHL1-208	ENST00000497403	CTDP1	Q9Y5B0	961 aa	Predicted RBP	14.09	□□□□□ -0.15
GRHL1-208	ENST00000497403	ATP10A	O60312	1499 aa		14.09	□□□□□ -0.15
GRHL1-208	ENST00000497403	STRN4	Q9NRL3	753 aa		14.09	□□□□□ -0.15
GRHL1-208	ENST00000497403	CEP170	Q5SW79	1584 aa		14.09	□□□□□ -0.15
GRHL1-208	ENST00000497403	CCDC146	Q8IYE0	955 aa		14.08	□□□□□ -0.16
GRHL1-208	ENST00000497403	BRD4	O60885	1362 aa	Predicted RBP	14.08	□□□□□ -0.16
GRHL1-208	ENST00000497403	CCDC30	Q5VVM6	783 aa		14.08	□□□□□ -0.16
GRHL1-208	ENST00000497403	NUP153	P49790	1475 aa	Known RBP	14.08	□□□□□ -0.16
GRHL1-208	ENST00000497403	RUFY2	Q8WXA3	655 aa		14.08	□□□□□ -0.16
GRHL1-208	ENST00000497403	CABP4	P57796	275 aa		14.07	□□□□□ -0.16
GRHL1-208	ENST00000497403	RGS3	P49796	1198 aa		14.07	□□□□□ -0.16
GRHL1-208	ENST00000497403	PHF8	Q9UPP1	1060 aa		14.07	□□□□□ -0.16
GRHL1-208	ENST00000497403	NUDT16	Q96DE0	195 aa	Known RBP	14.06	□□□□□ -0.16
GRHL1-208	ENST00000497403	AMOTL2	Q9Y2J4	779 aa		14.06	□□□□□ -0.16
GRHL1-208	ENST00000497403	IRX6	P78412	446 aa	Predicted RBP	14.06	□□□□□ -0.16
GRHL1-208	ENST00000497403	DDX19B	Q9UMR2	479 aa		14.06	□□□□□ -0.16
GRHL1-208	ENST00000497403	RIC3	Q7Z5B4	369 aa		14.05	□□□□□ -0.16
GRHL1-208	ENST00000497403	NSD2	O96028	1365 aa		14.05	□□□□□ -0.16
GRHL1-208	ENST00000497403	NAIP	Q13075	1403 aa		14.05	□□□□□ -0.16
GRHL1-208	ENST00000497403	CSPP1	Q1MSJ5	1256 aa		14.05	□□□□□ -0.16
GRHL1-208	ENST00000497403	GGNBP2	Q9H3C7	697 aa		14.05	□□□□□ -0.16
GRHL1-208	ENST00000497403	EIF2S2	P20042	333 aa	Known RBP	14.05	□□□□□ -0.16
GRHL1-208	ENST00000497403	AMOT	Q4VCS5	1084 aa		14.05	□□□□□ -0.16
GRHL1-208	ENST00000497403	G3BP1	Q13283	466 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
GRHL1-208	ENST00000497403	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.04	□□□□□ -0.16
GRHL1-208	ENST00000497403	CABP1	Q9NZU7	370 aa		14.03	□□□□□ -0.16
GRHL1-208	ENST00000497403	CT47B1	P0C2W7	299 aa	Predicted RBP	14.03	□□□□□ -0.16
GRHL1-208	ENST00000497403	L1TD1	Q5T7N2	865 aa	Known RBP	14.03	□□□□□ -0.16
GRHL1-208	ENST00000497403	SYNE3	Q6ZMZ3	975 aa		14.03	□□□□□ -0.16
GRHL1-208	ENST00000497403	NPHP3	Q7Z494	1330 aa		14.03	□□□□□ -0.16
GRHL1-208	ENST00000497403	TRIM6-TRIM34	B2RNG4	842 aa		14.02	□□□□□ -0.16
GRHL1-208	ENST00000497403	ZNF652	Q9Y2D9	606 aa		14.02	□□□□□ -0.16
GRHL1-208	ENST00000497403	MFAP1	P55081	439 aa	Known RBP	14.02	□□□□□ -0.17
GRHL1-208	ENST00000497403	SYCP2	Q9BX26	1530 aa		14.02	□□□□□ -0.17
GRHL1-208	ENST00000497403	KLHL34	Q8N239	644 aa		14.01	□□□□□ -0.17
GRHL1-208	ENST00000497403	GNL3L	Q9NVN8	582 aa	Known RBP	14.01	□□□□□ -0.17
GRHL1-208	ENST00000497403	FKBP5	Q13451	457 aa	Predicted RBP	14.01	□□□□□ -0.17
GRHL1-208	ENST00000497403	NUTM2G	Q5VZR2	741 aa		14.01	□□□□□ -0.17
GRHL1-208	ENST00000497403	ERC2	O15083	957 aa		14	□□□□□ -0.17
GRHL1-208	ENST00000497403	CWC22	Q9HCG8	908 aa	Known RBP	14	□□□□□ -0.17
GRHL1-208	ENST00000497403	KIF7	Q2M1P5	1343 aa		14	□□□□□ -0.17
GRHL1-208	ENST00000497403	RIMS2	Q9UQ26	1411 aa		14	□□□□□ -0.17
GRHL1-208	ENST00000497403	RBM42	Q9BTD8	480 aa	Known RBP	14	□□□□□ -0.17
GRHL1-208	ENST00000497403	ZFYVE16	Q7Z3T8	1539 aa		14	□□□□□ -0.17
GRHL1-208	ENST00000497403	TTC21A	Q8NDW8	1320 aa		14	□□□□□ -0.17
GRHL1-208	ENST00000497403	WASL	O00401	505 aa	Predicted RBP	14	□□□□□ -0.17
GRHL1-208	ENST00000497403	CPLX2	Q6PUV4	134 aa	Known RBP	14	□□□□□ -0.17
GRHL1-208	ENST00000497403	IFIT2	P09913	472 aa	Known RBP	14	□□□□□ -0.17
GRHL1-208	ENST00000497403	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.99	□□□□□ -0.17
GRHL1-208	ENST00000497403	UBAP1L	F5GYI3	381 aa		13.99	□□□□□ -0.17
GRHL1-208	ENST00000497403	STARD3NL	O95772	234 aa		13.99	□□□□□ -0.17
GRHL1-208	ENST00000497403	GNAI3	P08754	354 aa		13.99	□□□□□ -0.17
GRHL1-208	ENST00000497403	SCAF11	Q99590	1463 aa	Known RBP	13.99	□□□□□ -0.17
GRHL1-208	ENST00000497403	IDI1	Q13907	227 aa		13.99	□□□□□ -0.17
GRHL1-208	ENST00000497403	ERC1	Q8IUD2	1116 aa		13.99	□□□□□ -0.17
GRHL1-208	ENST00000497403	TCERG1	O14776	1098 aa	Known RBP	13.98	□□□□□ -0.17
GRHL1-208	ENST00000497403	AKAP17A	Q02040	695 aa	Known RBP	13.98	□□□□□ -0.17
GRHL1-208	ENST00000497403	NGLY1	Q96IV0	654 aa		13.98	□□□□□ -0.17
GRHL1-208	ENST00000497403	APBB1	O00213	710 aa		13.98	□□□□□ -0.17
GRHL1-208	ENST00000497403	MAGI2	Q86UL8	1455 aa		13.98	□□□□□ -0.17
GRHL1-208	ENST00000497403	TTC21B	Q7Z4L5	1316 aa		13.98	□□□□□ -0.17
GRHL1-208	ENST00000497403	C11orf95	C9JLR9	678 aa	Predicted RBP	13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	MTHFS	P49914	203 aa		13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	TCOF1	Q13428	1488 aa	Known RBP	13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	C14orf93	Q9H972	538 aa	Known RBP	13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	ZBED9	Q6R2W3	1325 aa		13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	ZNF428	Q96B54	188 aa		13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	KRT28	Q7Z3Y7	464 aa		13.97	□□□□□ -0.17
GRHL1-208	ENST00000497403	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.96	□□□□□ -0.17
GRHL1-208	ENST00000497403	TOMM22	Q9NS69	142 aa		13.96	□□□□□ -0.17
GRHL1-208	ENST00000497403	RRP7A	Q9Y3A4	280 aa	Known RBP	13.96	□□□□□ -0.17
GRHL1-208	ENST00000497403	TARBP1	Q13395	1621 aa	Known RBP	13.96	□□□□□ -0.18
GRHL1-208	ENST00000497403		A0A087WZG4	1122 aa		13.96	□□□□□ -0.18
GRHL1-208	ENST00000497403	CHAF1A	Q13111	956 aa	Predicted RBP	13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	APAF1	O14727	1248 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	RNF20	Q5VTR2	975 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	PUS7	Q96PZ0	661 aa	Known RBP	13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	DIAPH3	Q9NSV4	1193 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	NOS1	P29475	1434 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	CFAP43	Q8NDM7	1665 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	FCHSD2	O94868	740 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	DNAJC5	Q9H3Z4	198 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	USP35	Q9P2H5	1018 aa		13.95	□□□□□ -0.18
GRHL1-208	ENST00000497403	TPM4	P67936	248 aa		13.94	□□□□□ -0.18
GRHL1-208	ENST00000497403	HSP90AB3P	Q58FF7	597 aa		13.94	□□□□□ -0.18
GRHL1-208	ENST00000497403	FBXW7	Q969H0	707 aa		13.94	□□□□□ -0.18
GRHL1-208	ENST00000497403	MAPKBP1	O60336	1514 aa		13.94	□□□□□ -0.18
GRHL1-208	ENST00000497403	TRPM2	O94759	1503 aa		13.94	□□□□□ -0.18
GRHL1-208	ENST00000497403	MARCH6	O60337	910 aa		13.94	□□□□□ -0.18
GRHL1-208	ENST00000497403	SLC3A2	P08195	630 aa	Known RBP	13.94	□□□□□ -0.18
GRHL1-208	ENST00000497403	CEBPA	P49715	358 aa	Predicted RBP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms