RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 NCOA3Q9Y6Q9 1424 aa13.86□□□□□ -0.19
TCTN3-206ENST00000497399 LRP6O75581 1613 aa13.86□□□□□ -0.19
TCTN3-206ENST00000497399 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
TCTN3-206ENST00000497399 METP08581 1390 aa13.85□□□□□ -0.19
TCTN3-206ENST00000497399 YTHDC2Q9H6S0 1430 aaKnown RBP13.85□□□□□ -0.19
TCTN3-206ENST00000497399 MSH6P52701 1360 aa13.84□□□□□ -0.19
TCTN3-206ENST00000497399 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
TCTN3-206ENST00000497399 BCANQ96GW7 911 aa13.84□□□□□ -0.19
TCTN3-206ENST00000497399 ST20-MTHFSA0A0A6YYL1 179 aa13.83□□□□□ -0.2
TCTN3-206ENST00000497399 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.2
TCTN3-206ENST00000497399 PIK3R4Q99570 1358 aa13.83□□□□□ -0.2
TCTN3-206ENST00000497399 NHSL1Q5SYE7 1610 aa13.82□□□□□ -0.2
TCTN3-206ENST00000497399 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
TCTN3-206ENST00000497399 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
TCTN3-206ENST00000497399 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
TCTN3-206ENST00000497399 JCADQ9P266 1359 aa13.81□□□□□ -0.2
TCTN3-206ENST00000497399 NALCNQ8IZF0 1738 aa13.81□□□□□ -0.2
TCTN3-206ENST00000497399 TECPR2O15040 1411 aa13.81□□□□□ -0.2
TCTN3-206ENST00000497399 TESK2Q96S53 571 aa13.8□□□□□ -0.2
TCTN3-206ENST00000497399 STK26Q9P289 416 aa13.8□□□□□ -0.2
TCTN3-206ENST00000497399 EIF3AQ14152 1382 aaKnown RBP13.8□□□□□ -0.2
TCTN3-206ENST00000497399 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
TCTN3-206ENST00000497399 C11orf95C9JLR9 678 aaPredicted RBP13.79□□□□□ -0.2
TCTN3-206ENST00000497399 C19orf44Q9H6X5 657 aa13.78□□□□□ -0.2
TCTN3-206ENST00000497399 AMOTL2Q9Y2J4 779 aa13.78□□□□□ -0.2
TCTN3-206ENST00000497399 CENPJQ9HC77 1338 aaPredicted RBP13.77□□□□□ -0.21
TCTN3-206ENST00000497399 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
TCTN3-206ENST00000497399 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
TCTN3-206ENST00000497399 MST1RQ04912 1400 aa13.75□□□□□ -0.21
TCTN3-206ENST00000497399 PLEKHH1Q9ULM0 1364 aa13.75□□□□□ -0.21
TCTN3-206ENST00000497399 WASHC2AQ641Q2 1341 aa13.75□□□□□ -0.21
TCTN3-206ENST00000497399 SIRT1Q96EB6 747 aa13.75□□□□□ -0.21
TCTN3-206ENST00000497399 ROBO2Q9HCK4 1378 aa13.74□□□□□ -0.21
TCTN3-206ENST00000497399 PRAM1Q96QH2 718 aa13.74□□□□□ -0.21
TCTN3-206ENST00000497399 DCCP43146 1447 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 KIF7Q2M1P5 1343 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 SPATA31A6Q5VVP1 1343 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 TULP4Q9NRJ4 1543 aa13.73□□□□□ -0.21
TCTN3-206ENST00000497399 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.21
TCTN3-206ENST00000497399 POGKQ9P215 609 aa13.71□□□□□ -0.21
TCTN3-206ENST00000497399 TMF1P82094 1093 aa13.7□□□□□ -0.22
TCTN3-206ENST00000497399 ATF3P18847 181 aa13.69□□□□□ -0.22
TCTN3-206ENST00000497399 MINK1Q8N4C8 1332 aaPredicted RBP13.68□□□□□ -0.22
TCTN3-206ENST00000497399 ADGRB2O60241 1585 aa13.68□□□□□ -0.22
TCTN3-206ENST00000497399 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
TCTN3-206ENST00000497399 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
TCTN3-206ENST00000497399 DDX17Q92841 729 aaKnown RBP13.68□□□□□ -0.22
TCTN3-206ENST00000497399 MYOM1P52179 1685 aa13.68□□□□□ -0.22
TCTN3-206ENST00000497399 C14orf37Q86TY3 774 aa13.67□□□□□ -0.22
TCTN3-206ENST00000497399 UPF1Q92900 1129 aaKnown RBP eCLIP13.66□□□□□ -0.22
TCTN3-206ENST00000497399 MARF1Q9Y4F3 1742 aaKnown RBP13.65□□□□□ -0.22
TCTN3-206ENST00000497399 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
TCTN3-206ENST00000497399 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
TCTN3-206ENST00000497399 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
TCTN3-206ENST00000497399 PNPLA6Q8IY17 1366 aa13.64□□□□□ -0.23
TCTN3-206ENST00000497399 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
TCTN3-206ENST00000497399 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
TCTN3-206ENST00000497399 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
TCTN3-206ENST00000497399 C1orf167Q5SNV9 1468 aa13.63□□□□□ -0.23
TCTN3-206ENST00000497399 ZNF772Q68DY9 489 aaPredicted RBP13.63□□□□□ -0.23
TCTN3-206ENST00000497399 CDK19Q9BWU1 502 aa13.63□□□□□ -0.23
TCTN3-206ENST00000497399 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
TCTN3-206ENST00000497399 WASLO00401 505 aaPredicted RBP13.62□□□□□ -0.23
TCTN3-206ENST00000497399 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
TCTN3-206ENST00000497399 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
TCTN3-206ENST00000497399 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
TCTN3-206ENST00000497399 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
TCTN3-206ENST00000497399 USP32Q8NFA0 1604 aa13.61□□□□□ -0.23
TCTN3-206ENST00000497399 NUTM2BA6NNL0 878 aaPredicted RBP13.61□□□□□ -0.23
TCTN3-206ENST00000497399 NUTM2EB1AL46 878 aaPredicted RBP13.61□□□□□ -0.23
TCTN3-206ENST00000497399 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
TCTN3-206ENST00000497399 AFF2P51816 1311 aa13.61□□□□□ -0.23
TCTN3-206ENST00000497399 SRPK2P78362 688 aaKnown RBP13.6□□□□□ -0.23
TCTN3-206ENST00000497399 DIEXFQ68CQ4 756 aaKnown RBP13.6□□□□□ -0.23
TCTN3-206ENST00000497399 LRRC59Q96AG4 307 aaKnown RBP13.6□□□□□ -0.23
TCTN3-206ENST00000497399 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
TCTN3-206ENST00000497399 ATP7BP35670 1465 aa13.6□□□□□ -0.23
TCTN3-206ENST00000497399 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
TCTN3-206ENST00000497399 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
TCTN3-206ENST00000497399 RGS12O14924 1447 aa13.59□□□□□ -0.23
TCTN3-206ENST00000497399 RXRBP28702 533 aa13.59□□□□□ -0.23
TCTN3-206ENST00000497399 MEX3CQ5U5Q3 659 aaKnown RBP13.59□□□□□ -0.23
TCTN3-206ENST00000497399 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
TCTN3-206ENST00000497399 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.24
TCTN3-206ENST00000497399 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
TCTN3-206ENST00000497399 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
TCTN3-206ENST00000497399 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
TCTN3-206ENST00000497399 PXDNQ92626 1479 aa13.55□□□□□ -0.24
TCTN3-206ENST00000497399 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
TCTN3-206ENST00000497399 PANK3Q9H999 370 aa13.55□□□□□ -0.24
TCTN3-206ENST00000497399 AKAP12Q02952 1782 aa13.54□□□□□ -0.24
TCTN3-206ENST00000497399 PER1O15534 1290 aaPredicted RBP13.54□□□□□ -0.24
TCTN3-206ENST00000497399 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
TCTN3-206ENST00000497399 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
TCTN3-206ENST00000497399 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
TCTN3-206ENST00000497399 PPIP5K1Q6PFW1 1433 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms