RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	QRICH2	Q9H0J4	1663 aa		11.56	□□□□□ -0.56
EFNA1-205	ENST00000497282	TOM1	O60784	492 aa		11.56	□□□□□ -0.56
EFNA1-205	ENST00000497282	PIP4K2B	P78356	416 aa		11.56	□□□□□ -0.56
EFNA1-205	ENST00000497282	C19orf44	Q9H6X5	657 aa		11.56	□□□□□ -0.56
EFNA1-205	ENST00000497282	TRAK1	Q9UPV9	953 aa		11.56	□□□□□ -0.56
EFNA1-205	ENST00000497282	GPRASP1	Q5JY77	1395 aa		11.55	□□□□□ -0.56
EFNA1-205	ENST00000497282	SIRT1	Q96EB6	747 aa		11.55	□□□□□ -0.56
EFNA1-205	ENST00000497282	PRAM1	Q96QH2	718 aa		11.55	□□□□□ -0.56
EFNA1-205	ENST00000497282	ROCK2	O75116	1388 aa	Known RBP	11.54	□□□□□ -0.56
EFNA1-205	ENST00000497282	USP32	Q8NFA0	1604 aa		11.54	□□□□□ -0.56
EFNA1-205	ENST00000497282	SCAF1	Q9H7N4	1312 aa	Known RBP	11.54	□□□□□ -0.56
EFNA1-205	ENST00000497282	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
EFNA1-205	ENST00000497282	CADPS2	Q86UW7	1296 aa		11.53	□□□□□ -0.56
EFNA1-205	ENST00000497282	RGPD8	O14715	1765 aa	Predicted RBP	11.53	□□□□□ -0.56
EFNA1-205	ENST00000497282	NHSL1	Q5SYE7	1610 aa		11.53	□□□□□ -0.56
EFNA1-205	ENST00000497282	C1orf167	Q5SNV9	1468 aa		11.52	□□□□□ -0.56
EFNA1-205	ENST00000497282	ATF3	P18847	181 aa		11.52	□□□□□ -0.57
EFNA1-205	ENST00000497282	COL16A1	Q07092	1604 aa	Predicted RBP	11.51	□□□□□ -0.57
EFNA1-205	ENST00000497282	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.51	□□□□□ -0.57
EFNA1-205	ENST00000497282	POGK	Q9P215	609 aa		11.51	□□□□□ -0.57
EFNA1-205	ENST00000497282	SLAIN2	Q9P270	581 aa		11.51	□□□□□ -0.57
EFNA1-205	ENST00000497282	PHLPP1	O60346	1717 aa		11.51	□□□□□ -0.57
EFNA1-205	ENST00000497282	TULP4	Q9NRJ4	1543 aa		11.5	□□□□□ -0.57
EFNA1-205	ENST00000497282	TIMELESS	Q9UNS1	1208 aa		11.5	□□□□□ -0.57
EFNA1-205	ENST00000497282	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.5	□□□□□ -0.57
EFNA1-205	ENST00000497282	TOPAZ1	Q8N9V7	1692 aa		11.49	□□□□□ -0.57
EFNA1-205	ENST00000497282	BRINP3	Q76B58	766 aa		11.49	□□□□□ -0.57
EFNA1-205	ENST00000497282	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.49	□□□□□ -0.57
EFNA1-205	ENST00000497282	HSPA1L	P34931	641 aa		11.48	□□□□□ -0.57
EFNA1-205	ENST00000497282	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.48	□□□□□ -0.57
EFNA1-205	ENST00000497282	ATP7B	P35670	1465 aa		11.48	□□□□□ -0.57
EFNA1-205	ENST00000497282	KIF1A	Q12756	1690 aa		11.48	□□□□□ -0.57
EFNA1-205	ENST00000497282	ITSN1	Q15811	1721 aa		11.47	□□□□□ -0.57
EFNA1-205	ENST00000497282	NUTM2F	A1L443	756 aa		11.47	□□□□□ -0.57
EFNA1-205	ENST00000497282	ORAI2	Q96SN7	254 aa		11.47	□□□□□ -0.57
EFNA1-205	ENST00000497282	CARD11	Q9BXL7	1154 aa		11.47	□□□□□ -0.57
EFNA1-205	ENST00000497282	ANKAR	Q7Z5J8	1434 aa		11.46	□□□□□ -0.57
EFNA1-205	ENST00000497282	EIF3A	Q14152	1382 aa	Known RBP	11.46	□□□□□ -0.57
EFNA1-205	ENST00000497282	PRR36	Q9H6K5	1346 aa		11.46	□□□□□ -0.57
EFNA1-205	ENST00000497282	WASL	O00401	505 aa	Predicted RBP	11.45	□□□□□ -0.58
EFNA1-205	ENST00000497282	DDX17	Q92841	729 aa	Known RBP	11.45	□□□□□ -0.58
EFNA1-205	ENST00000497282	PXDN	Q92626	1479 aa		11.44	□□□□□ -0.58
EFNA1-205	ENST00000497282	USP47	Q96K76	1375 aa		11.43	□□□□□ -0.58
EFNA1-205	ENST00000497282	SBNO2	Q9Y2G9	1366 aa		11.43	□□□□□ -0.58
EFNA1-205	ENST00000497282	SHPRH	Q149N8	1683 aa		11.43	□□□□□ -0.58
EFNA1-205	ENST00000497282	ESCO1	Q5FWF5	840 aa		11.42	□□□□□ -0.58
EFNA1-205	ENST00000497282	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.41	□□□□□ -0.58
EFNA1-205	ENST00000497282	CDK19	Q9BWU1	502 aa		11.41	□□□□□ -0.58
EFNA1-205	ENST00000497282	SOS2	Q07890	1332 aa	Predicted RBP	11.39	□□□□□ -0.59
EFNA1-205	ENST00000497282	ST20-MTHFS	A0A0A6YYL1	179 aa		11.39	□□□□□ -0.59
EFNA1-205	ENST00000497282	MED1	Q15648	1581 aa	Predicted RBP	11.39	□□□□□ -0.59
EFNA1-205	ENST00000497282	NUDT16	Q96DE0	195 aa	Known RBP	11.39	□□□□□ -0.59
EFNA1-205	ENST00000497282	TESK2	Q96S53	571 aa		11.39	□□□□□ -0.59
EFNA1-205	ENST00000497282	CABP2	Q9NPB3	220 aa		11.39	□□□□□ -0.59
EFNA1-205	ENST00000497282	PHF8	Q9UPP1	1060 aa		11.39	□□□□□ -0.59
EFNA1-205	ENST00000497282	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.38	□□□□□ -0.59
EFNA1-205	ENST00000497282	FOXO3	O43524	673 aa		11.38	□□□□□ -0.59
EFNA1-205	ENST00000497282	XPC	Q01831	940 aa	Predicted RBP	11.38	□□□□□ -0.59
EFNA1-205	ENST00000497282	PMFBP1	Q8TBY8	1022 aa		11.38	□□□□□ -0.59
EFNA1-205	ENST00000497282	ALS2	Q96Q42	1657 aa		11.38	□□□□□ -0.59
EFNA1-205	ENST00000497282	AKAP12	Q02952	1782 aa		11.38	□□□□□ -0.59
EFNA1-205	ENST00000497282	ABCA3	Q99758	1704 aa		11.38	□□□□□ -0.59
EFNA1-205	ENST00000497282	NPHP3	Q7Z494	1330 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	EVC2	Q86UK5	1308 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	PPIP5K1	Q6PFW1	1433 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	SRPK2	P78362	688 aa	Known RBP	11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	LRP6	O75581	1613 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	PNPLA6	Q8IY17	1366 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	JCAD	Q9P266	1359 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	DISP3	Q9P2K9	1392 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	NRK	Q7Z2Y5	1582 aa		11.37	□□□□□ -0.59
EFNA1-205	ENST00000497282	MYOM1	P52179	1685 aa		11.36	□□□□□ -0.59
EFNA1-205	ENST00000497282	CRYBG1	Q9Y4K1	1723 aa		11.36	□□□□□ -0.59
EFNA1-205	ENST00000497282	POLR3A	O14802	1390 aa	Predicted RBP	11.36	□□□□□ -0.59
EFNA1-205	ENST00000497282	MON2	Q7Z3U7	1717 aa		11.35	□□□□□ -0.59
EFNA1-205	ENST00000497282	CCDC61	Q9Y6R9	512 aa		11.35	□□□□□ -0.59
EFNA1-205	ENST00000497282	TNS3	Q68CZ2	1445 aa		11.35	□□□□□ -0.59
EFNA1-205	ENST00000497282	ATAD2	Q6PL18	1390 aa		11.34	□□□□□ -0.59
EFNA1-205	ENST00000497282	ACE	P12821	1306 aa		11.34	□□□□□ -0.59
EFNA1-205	ENST00000497282	CD163L1	Q9NR16	1453 aa		11.33	□□□□□ -0.6
EFNA1-205	ENST00000497282	PLEKHG3	A1L390	1219 aa		11.33	□□□□□ -0.6
EFNA1-205	ENST00000497282	KRT28	Q7Z3Y7	464 aa		11.33	□□□□□ -0.6
EFNA1-205	ENST00000497282	LRRC59	Q96AG4	307 aa	Known RBP	11.33	□□□□□ -0.6
EFNA1-205	ENST00000497282	SPATA31A3	Q5VYP0	1347 aa		11.33	□□□□□ -0.6
EFNA1-205	ENST00000497282	SBNO1	A3KN83	1393 aa		11.32	□□□□□ -0.6
EFNA1-205	ENST00000497282	HSPA5	P11021	654 aa	Known RBP	11.32	□□□□□ -0.6
EFNA1-205	ENST00000497282	NGDN	Q8NEJ9	315 aa	Known RBP	11.32	□□□□□ -0.6
EFNA1-205	ENST00000497282	PIK3C2A	O00443	1686 aa		11.32	□□□□□ -0.6
EFNA1-205	ENST00000497282	CPSF1	Q10570	1443 aa	Known RBP	11.32	□□□□□ -0.6
EFNA1-205	ENST00000497282	MARF1	Q9Y4F3	1742 aa	Known RBP	11.32	□□□□□ -0.6
EFNA1-205	ENST00000497282	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.31	□□□□□ -0.6
EFNA1-205	ENST00000497282	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
EFNA1-205	ENST00000497282	CABP1	Q9NZU7	370 aa		11.31	□□□□□ -0.6
EFNA1-205	ENST00000497282	USP6	P35125	1406 aa		11.31	□□□□□ -0.6
EFNA1-205	ENST00000497282	SPATA31A6	Q5VVP1	1343 aa		11.31	□□□□□ -0.6
EFNA1-205	ENST00000497282	SSH2	Q76I76	1423 aa		11.3	□□□□□ -0.6
EFNA1-205	ENST00000497282	PSME1	Q06323	249 aa		11.3	□□□□□ -0.6
EFNA1-205	ENST00000497282	TMF1	P82094	1093 aa		11.29	□□□□□ -0.6
EFNA1-205	ENST00000497282	PUS7	Q96PZ0	661 aa	Known RBP	11.29	□□□□□ -0.6
EFNA1-205	ENST00000497282		A0A1W2PP64	1363 aa		11.28	□□□□□ -0.6

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