RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 SH3D19Q5HYK7 790 aa11.03□□□□□ -0.64
MSH5-219ENST00000497269 RIC3Q7Z5B4 369 aa11.03□□□□□ -0.64
MSH5-219ENST00000497269 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
MSH5-219ENST00000497269 LIMD1Q9UGP4 676 aa11.03□□□□□ -0.64
MSH5-219ENST00000497269 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
MSH5-219ENST00000497269 PRR14Q9BWN1 585 aa11.02□□□□□ -0.65
MSH5-219ENST00000497269 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
MSH5-219ENST00000497269 DIXDC1Q155Q3 683 aa11.01□□□□□ -0.65
MSH5-219ENST00000497269 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
MSH5-219ENST00000497269 BLOC1S3Q6QNY0 202 aa11.01□□□□□ -0.65
MSH5-219ENST00000497269 PCMTD1Q96MG8 357 aaPredicted RBP11.01□□□□□ -0.65
MSH5-219ENST00000497269 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
MSH5-219ENST00000497269 FDX1P10109 184 aa11□□□□□ -0.65
MSH5-219ENST00000497269 USP46P62068 366 aa11□□□□□ -0.65
MSH5-219ENST00000497269 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
MSH5-219ENST00000497269 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
MSH5-219ENST00000497269 PCDHB15Q9Y5E8 787 aa10.99□□□□□ -0.65
MSH5-219ENST00000497269 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
MSH5-219ENST00000497269 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
MSH5-219ENST00000497269 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
MSH5-219ENST00000497269 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
MSH5-219ENST00000497269 CEP164Q9UPV0 1460 aa10.98□□□□□ -0.65
MSH5-219ENST00000497269 MORN1Q5T089 497 aa10.97□□□□□ -0.65
MSH5-219ENST00000497269 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
MSH5-219ENST00000497269 PCDHGC3Q9UN70 934 aa10.97□□□□□ -0.65
MSH5-219ENST00000497269 WDR62O43379 1518 aa10.96□□□□□ -0.65
MSH5-219ENST00000497269 SPTLC1O15269 473 aa10.96□□□□□ -0.65
MSH5-219ENST00000497269 MTRQ99707 1265 aa10.96□□□□□ -0.65
MSH5-219ENST00000497269 C6orf229H3BNL8 230 aa10.95□□□□□ -0.66
MSH5-219ENST00000497269 QPCTQ16769 361 aa10.95□□□□□ -0.66
MSH5-219ENST00000497269 NUTM2BA6NNL0 878 aaPredicted RBP10.94□□□□□ -0.66
MSH5-219ENST00000497269 NUTM2EB1AL46 878 aaPredicted RBP10.94□□□□□ -0.66
MSH5-219ENST00000497269 TLL1O43897 1013 aa10.94□□□□□ -0.66
MSH5-219ENST00000497269 NUTM2DQ5VT03 806 aaPredicted RBP10.94□□□□□ -0.66
MSH5-219ENST00000497269 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
MSH5-219ENST00000497269 NYAP1Q6ZVC0 841 aa10.94□□□□□ -0.66
MSH5-219ENST00000497269 NUTM2AQ8IVF1 878 aaPredicted RBP10.94□□□□□ -0.66
MSH5-219ENST00000497269 FBXO31Q5XUX0 539 aaPredicted RBP10.93□□□□□ -0.66
MSH5-219ENST00000497269 SCUBE3Q8IX30 993 aa10.93□□□□□ -0.66
MSH5-219ENST00000497269 NR1I2O75469 434 aa10.92□□□□□ -0.66
MSH5-219ENST00000497269 TSC1Q92574 1164 aa10.92□□□□□ -0.66
MSH5-219ENST00000497269 ZNF516Q92618 1163 aa10.92□□□□□ -0.66
MSH5-219ENST00000497269 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
MSH5-219ENST00000497269 CFTRP13569 1480 aa10.92□□□□□ -0.66
MSH5-219ENST00000497269 TOP2AP11388 1531 aaKnown RBP10.91□□□□□ -0.66
MSH5-219ENST00000497269 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
MSH5-219ENST00000497269 HRCP23327 699 aa10.9□□□□□ -0.66
MSH5-219ENST00000497269 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.9□□□□□ -0.66
MSH5-219ENST00000497269 MTMR2Q13614 643 aa10.89□□□□□ -0.67
MSH5-219ENST00000497269 RTL5Q5HYW3 569 aaPredicted RBP10.89□□□□□ -0.67
MSH5-219ENST00000497269 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
MSH5-219ENST00000497269 ZBTB3Q9H5J0 574 aa10.89□□□□□ -0.67
MSH5-219ENST00000497269 IL21Q9HBE4 155 aa10.89□□□□□ -0.67
MSH5-219ENST00000497269 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
MSH5-219ENST00000497269 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
MSH5-219ENST00000497269 LILRB3O75022 631 aa10.87□□□□□ -0.67
MSH5-219ENST00000497269 ZPR1O75312 459 aa10.87□□□□□ -0.67
MSH5-219ENST00000497269 FMNL1O95466 1100 aaPredicted RBP10.87□□□□□ -0.67
MSH5-219ENST00000497269 Q3C1V9 767 aa10.87□□□□□ -0.67
MSH5-219ENST00000497269 NKX2-3Q8TAU0 364 aa10.87□□□□□ -0.67
MSH5-219ENST00000497269 SPSB2Q99619 263 aa10.86□□□□□ -0.67
MSH5-219ENST00000497269 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
MSH5-219ENST00000497269 GJA5P36382 358 aa10.85□□□□□ -0.67
MSH5-219ENST00000497269 RFC5P40937 340 aa10.85□□□□□ -0.67
MSH5-219ENST00000497269 CFAP99D6REC4 459 aa10.84□□□□□ -0.67
MSH5-219ENST00000497269 BRICD5Q6PL45 260 aa10.84□□□□□ -0.67
MSH5-219ENST00000497269 PRR7Q8TB68 274 aa10.84□□□□□ -0.67
MSH5-219ENST00000497269 PRDM9Q9NQV7 894 aa10.84□□□□□ -0.67
MSH5-219ENST00000497269 AP1G2O75843 785 aa10.83□□□□□ -0.68
MSH5-219ENST00000497269 TUSC1Q2TAM9 212 aa10.83□□□□□ -0.68
MSH5-219ENST00000497269 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
MSH5-219ENST00000497269 THAP11Q96EK4 314 aa10.83□□□□□ -0.68
MSH5-219ENST00000497269 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
MSH5-219ENST00000497269 ZNF608Q9ULD9 1512 aaPredicted RBP10.83□□□□□ -0.68
MSH5-219ENST00000497269 KCNC4Q03721 635 aa10.82□□□□□ -0.68
MSH5-219ENST00000497269 RETREG3Q86VR2 466 aa10.82□□□□□ -0.68
MSH5-219ENST00000497269 ADH1BP00325 375 aa10.8□□□□□ -0.68
MSH5-219ENST00000497269 PPP2R2DQ66LE6 453 aa10.79□□□□□ -0.68
MSH5-219ENST00000497269 FAM160A2Q8N612 972 aaPredicted RBP10.79□□□□□ -0.68
MSH5-219ENST00000497269 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
MSH5-219ENST00000497269 S1PR4O95977 384 aa10.78□□□□□ -0.68
MSH5-219ENST00000497269 SLC6A16Q9GZN6 736 aa10.78□□□□□ -0.68
MSH5-219ENST00000497269 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
MSH5-219ENST00000497269 ITGBL1O95965 494 aaPredicted RBP10.77□□□□□ -0.69
MSH5-219ENST00000497269 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
MSH5-219ENST00000497269 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
MSH5-219ENST00000497269 PRDM2Q13029 1718 aa10.76□□□□□ -0.69
MSH5-219ENST00000497269 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
MSH5-219ENST00000497269 PPEF1O14829 653 aaPredicted RBP10.75□□□□□ -0.69
MSH5-219ENST00000497269 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.692e-9■■■■■ 41.7
MSH5-219ENST00000497269 PER1O15534 1290 aaPredicted RBP10.74□□□□□ -0.69
MSH5-219ENST00000497269 USP17L8P0C7I0 530 aa10.74□□□□□ -0.69
MSH5-219ENST00000497269 JUNDP17535 347 aa10.74□□□□□ -0.69
MSH5-219ENST00000497269 MSS51Q4VC12 460 aa10.74□□□□□ -0.69
MSH5-219ENST00000497269 LRRN4Q8WUT4 740 aa10.74□□□□□ -0.69
MSH5-219ENST00000497269 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
MSH5-219ENST00000497269 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
MSH5-219ENST00000497269 CYB5RLQ6IPT4 315 aa10.73□□□□□ -0.69
MSH5-219ENST00000497269 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
MSH5-219ENST00000497269 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms