RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 APLP1P51693 650 aa9.8□□□□□ -0.84
VPS36-206ENST00000497149 CABLES1Q8TDN4 633 aa9.8□□□□□ -0.84
VPS36-206ENST00000497149 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
VPS36-206ENST00000497149 NUTM2BA6NNL0 878 aaPredicted RBP9.79□□□□□ -0.84
VPS36-206ENST00000497149 NUTM2EB1AL46 878 aaPredicted RBP9.79□□□□□ -0.84
VPS36-206ENST00000497149 PUS10Q3MIT2 529 aaKnown RBP9.79□□□□□ -0.84
VPS36-206ENST00000497149 TMEM259Q4ZIN3 620 aa9.79□□□□□ -0.84
VPS36-206ENST00000497149 RTL5Q5HYW3 569 aaPredicted RBP9.79□□□□□ -0.84
VPS36-206ENST00000497149 MORN1Q5T089 497 aa9.79□□□□□ -0.84
VPS36-206ENST00000497149 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
VPS36-206ENST00000497149 NUTM2AQ8IVF1 878 aaPredicted RBP9.79□□□□□ -0.84
VPS36-206ENST00000497149 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
VPS36-206ENST00000497149 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
VPS36-206ENST00000497149 MTMR2Q13614 643 aa9.77□□□□□ -0.85
VPS36-206ENST00000497149 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
VPS36-206ENST00000497149 SLC27A5Q9Y2P5 690 aa9.77□□□□□ -0.85
VPS36-206ENST00000497149 SPDYE5A6NIY4 337 aa9.75□□□□□ -0.85
VPS36-206ENST00000497149 C6orf229H3BNL8 230 aa9.75□□□□□ -0.85
VPS36-206ENST00000497149 PCDHB3Q9Y5E6 796 aa9.75□□□□□ -0.85
VPS36-206ENST00000497149 A0A0G2JS52 829 aa9.74□□□□□ -0.85
VPS36-206ENST00000497149 MCM6Q14566 821 aa9.74□□□□□ -0.85
VPS36-206ENST00000497149 Q3C1V9 767 aa9.74□□□□□ -0.85
VPS36-206ENST00000497149 SYMPKQ92797 1274 aaKnown RBP9.74□□□□□ -0.85
VPS36-206ENST00000497149 SCUBE3Q8IX30 993 aa9.73□□□□□ -0.85
VPS36-206ENST00000497149 ZMYND15Q9H091 742 aa9.73□□□□□ -0.85
VPS36-206ENST00000497149 AP1G2O75843 785 aa9.72□□□□□ -0.85
VPS36-206ENST00000497149 SNRKQ9NRH2 765 aa9.72□□□□□ -0.85
VPS36-206ENST00000497149 NR1I2O75469 434 aa9.71□□□□□ -0.86
VPS36-206ENST00000497149 BLOC1S3Q6QNY0 202 aa9.71□□□□□ -0.86
VPS36-206ENST00000497149 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
VPS36-206ENST00000497149 CFAP99D6REC4 459 aa9.7□□□□□ -0.86
VPS36-206ENST00000497149 BRICD5Q6PL45 260 aa9.7□□□□□ -0.86
VPS36-206ENST00000497149 RETREG3Q86VR2 466 aa9.69□□□□□ -0.86
VPS36-206ENST00000497149 PRR7Q8TB68 274 aa9.69□□□□□ -0.86
VPS36-206ENST00000497149 UBTFP17480 764 aaKnown RBP9.68□□□□□ -0.86
VPS36-206ENST00000497149 CTDSPL2Q05D32 466 aa9.68□□□□□ -0.86
VPS36-206ENST00000497149 RNF19BQ6ZMZ0 732 aa9.68□□□□□ -0.86
VPS36-206ENST00000497149 THAP11Q96EK4 314 aa9.68□□□□□ -0.86
VPS36-206ENST00000497149 FMNL1O95466 1100 aaPredicted RBP9.67□□□□□ -0.86
VPS36-206ENST00000497149 USP17L8P0C7I0 530 aa9.67□□□□□ -0.86
VPS36-206ENST00000497149 COPS2P61201 443 aa9.67□□□□□ -0.86
VPS36-206ENST00000497149 HELBQ8NG08 1087 aaPredicted RBP9.67□□□□□ -0.86
VPS36-206ENST00000497149 TSC1Q92574 1164 aa9.67□□□□□ -0.86
VPS36-206ENST00000497149 USB1Q9BQ65 265 aaKnown RBP9.67□□□□□ -0.86
VPS36-206ENST00000497149 MTMR14Q8NCE2 650 aa9.66□□□□□ -0.86
VPS36-206ENST00000497149 SOCS7O14512 581 aa9.65□□□□□ -0.86
VPS36-206ENST00000497149 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
VPS36-206ENST00000497149 A6NJR5 290 aa9.64□□□□□ -0.87
VPS36-206ENST00000497149 DESI1Q6ICB0 168 aa9.64□□□□□ -0.87
VPS36-206ENST00000497149 MTRQ99707 1265 aa9.63□□□□□ -0.87
VPS36-206ENST00000497149 RAD21O60216 631 aa9.62□□□□□ -0.87
VPS36-206ENST00000497149 ZPR1O75312 459 aa9.62□□□□□ -0.87
VPS36-206ENST00000497149 KCNC4Q03721 635 aa9.62□□□□□ -0.87
VPS36-206ENST00000497149 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
VPS36-206ENST00000497149 LRRN4Q8WUT4 740 aa9.62□□□□□ -0.87
VPS36-206ENST00000497149 POM121Q96HA1 1249 aa9.62□□□□□ -0.87
VPS36-206ENST00000497149 SPSB2Q99619 263 aa9.62□□□□□ -0.87
VPS36-206ENST00000497149 APBB1O00213 710 aa9.61□□□□□ -0.87
VPS36-206ENST00000497149 PER1O15534 1290 aaPredicted RBP9.61□□□□□ -0.87
VPS36-206ENST00000497149 FAM160A2Q8N612 972 aaPredicted RBP9.61□□□□□ -0.87
VPS36-206ENST00000497149 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
VPS36-206ENST00000497149 SUPT5HO00267 1087 aaKnown RBP9.6□□□□□ -0.87
VPS36-206ENST00000497149 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
VPS36-206ENST00000497149 GJD4Q96KN9 370 aaPredicted RBP9.6□□□□□ -0.87
VPS36-206ENST00000497149 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
VPS36-206ENST00000497149 HMX1Q9NP08 348 aaPredicted RBP9.6□□□□□ -0.87
VPS36-206ENST00000497149 MSS51Q4VC12 460 aa9.59□□□□□ -0.87
VPS36-206ENST00000497149 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
VPS36-206ENST00000497149 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
VPS36-206ENST00000497149 JUNDP17535 347 aa9.58□□□□□ -0.88
VPS36-206ENST00000497149 TRIM34Q9BYJ4 488 aa9.58□□□□□ -0.88
VPS36-206ENST00000497149 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
VPS36-206ENST00000497149 TLL1O43897 1013 aa9.57□□□□□ -0.88
VPS36-206ENST00000497149 TRAK2O60296 914 aa9.57□□□□□ -0.88
VPS36-206ENST00000497149 ADH1BP00325 375 aa9.57□□□□□ -0.88
VPS36-206ENST00000497149 PROSER2Q86WR7 435 aaPredicted RBP9.56□□□□□ -0.88
VPS36-206ENST00000497149 FNBP4Q8N3X1 1017 aaPredicted RBP9.56□□□□□ -0.88
VPS36-206ENST00000497149 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
VPS36-206ENST00000497149 DXOO77932 396 aaKnown RBP9.55□□□□□ -0.88
VPS36-206ENST00000497149 MMP16P51512 607 aa9.55□□□□□ -0.88
VPS36-206ENST00000497149 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
VPS36-206ENST00000497149 NDUFB9Q9Y6M9 179 aa9.55□□□□□ -0.88
VPS36-206ENST00000497149 NR6A1Q15406 480 aa9.54□□□□□ -0.88
VPS36-206ENST00000497149 PTPRNQ16849 979 aa9.54□□□□□ -0.88
VPS36-206ENST00000497149 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
VPS36-206ENST00000497149 ABL2P42684 1182 aa9.53□□□□□ -0.88
VPS36-206ENST00000497149 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
VPS36-206ENST00000497149 SLC6A16Q9GZN6 736 aa9.52□□□□□ -0.89
VPS36-206ENST00000497149 F12P00748 615 aaPredicted RBP9.51□□□□□ -0.89
VPS36-206ENST00000497149 IRX2Q9BZI1 471 aaPredicted RBP9.51□□□□□ -0.89
VPS36-206ENST00000497149 EVA1BQ9NVM1 165 aa9.51□□□□□ -0.89
VPS36-206ENST00000497149 GPR37L1O60883 481 aa9.5□□□□□ -0.89
VPS36-206ENST00000497149 CCNYL3P0C7X3 344 aa9.5□□□□□ -0.89
VPS36-206ENST00000497149 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
VPS36-206ENST00000497149 ZNF330Q9Y3S2 320 aaPredicted RBP9.5□□□□□ -0.89
VPS36-206ENST00000497149 IRF5Q13568 498 aa9.49□□□□□ -0.89
VPS36-206ENST00000497149 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
VPS36-206ENST00000497149 MAP10Q9P2G4 905 aa9.49□□□□□ -0.89
VPS36-206ENST00000497149 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
VPS36-206ENST00000497149 CTHP32929 405 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms