RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 ATF3P18847 181 aa22.38■■□□□ 1.17
PMF1-205ENST00000497069 ZEB1P37275 1124 aaPredicted RBP22.38■■□□□ 1.17
PMF1-205ENST00000497069 XIRP1Q702N8 1843 aaKnown RBP22.37■■□□□ 1.17
PMF1-205ENST00000497069 MINK1Q8N4C8 1332 aaPredicted RBP22.35■■□□□ 1.17
PMF1-205ENST00000497069 CADPS2Q86UW7 1296 aa22.35■■□□□ 1.17
PMF1-205ENST00000497069 DCCP43146 1447 aa22.34■■□□□ 1.17
PMF1-205ENST00000497069 UBAP1LF5GYI3 381 aa22.34■■□□□ 1.17
PMF1-205ENST00000497069 TOM1O60784 492 aa22.34■■□□□ 1.17
PMF1-205ENST00000497069 NALCNQ8IZF0 1738 aa22.33■■□□□ 1.17
PMF1-205ENST00000497069 USP47Q96K76 1375 aa22.33■■□□□ 1.17
PMF1-205ENST00000497069 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.32■■□□□ 1.16
PMF1-205ENST00000497069 HIRIP3Q9BW71 556 aaPredicted RBP22.32■■□□□ 1.16
PMF1-205ENST00000497069 CDC42BPGQ6DT37 1551 aa22.29■■□□□ 1.16
PMF1-205ENST00000497069 ST20-MTHFSA0A0A6YYL1 179 aa22.28■■□□□ 1.16
PMF1-205ENST00000497069 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.16
PMF1-205ENST00000497069 QRICH2Q9H0J4 1663 aa22.27■■□□□ 1.16
PMF1-205ENST00000497069 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
PMF1-205ENST00000497069 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
PMF1-205ENST00000497069 WASLO00401 505 aaPredicted RBP22.26■■□□□ 1.15
PMF1-205ENST00000497069 SLC24A1O60721 1099 aa22.26■■□□□ 1.15
PMF1-205ENST00000497069 SLAIN2Q9P270 581 aa22.26■■□□□ 1.15
PMF1-205ENST00000497069 PIP4K2BP78356 416 aa22.25■■□□□ 1.15
PMF1-205ENST00000497069 NUTM2FA1L443 756 aa22.24■■□□□ 1.15
PMF1-205ENST00000497069 EVC2Q86UK5 1308 aa22.24■■□□□ 1.15
PMF1-205ENST00000497069 SBNO2Q9Y2G9 1366 aa22.24■■□□□ 1.15
PMF1-205ENST00000497069 CDK19Q9BWU1 502 aa22.23■■□□□ 1.15
PMF1-205ENST00000497069 MST1RQ04912 1400 aa22.23■■□□□ 1.15
PMF1-205ENST00000497069 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
PMF1-205ENST00000497069 HSPA5P11021 654 aaKnown RBP22.21■■□□□ 1.15
PMF1-205ENST00000497069 FBXO41Q8TF61 875 aa22.2■■□□□ 1.14
PMF1-205ENST00000497069 C1orf167Q5SNV9 1468 aa22.2■■□□□ 1.14
PMF1-205ENST00000497069 FMN2Q9NZ56 1722 aa22.2■■□□□ 1.14
PMF1-205ENST00000497069 ANKARQ7Z5J8 1434 aa22.18■■□□□ 1.14
PMF1-205ENST00000497069 TMF1P82094 1093 aa22.18■■□□□ 1.14
PMF1-205ENST00000497069 ESCO1Q5FWF5 840 aa22.18■■□□□ 1.14
PMF1-205ENST00000497069 TESK2Q96S53 571 aa22.18■■□□□ 1.14
PMF1-205ENST00000497069 TULP4Q9NRJ4 1543 aa22.17■■□□□ 1.14
PMF1-205ENST00000497069 CABP2Q9NPB3 220 aa22.17■■□□□ 1.14
PMF1-205ENST00000497069 BRINP3Q76B58 766 aa22.15■■□□□ 1.14
PMF1-205ENST00000497069 NUDT16Q96DE0 195 aaKnown RBP22.15■■□□□ 1.14
PMF1-205ENST00000497069 ORAI2Q96SN7 254 aa22.14■■□□□ 1.13
PMF1-205ENST00000497069 PRR36Q9H6K5 1346 aa22.12■■□□□ 1.13
PMF1-205ENST00000497069 ROBO1Q9Y6N7 1651 aa22.12■■□□□ 1.13
PMF1-205ENST00000497069 CDCA8Q53HL2 280 aa22.12■■□□□ 1.13
PMF1-205ENST00000497069 ATP7BP35670 1465 aa22.11■■□□□ 1.13
PMF1-205ENST00000497069 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
PMF1-205ENST00000497069 CCDC61Q9Y6R9 512 aa22.11■■□□□ 1.13
PMF1-205ENST00000497069 ATAD2Q6PL18 1390 aa22.1■■□□□ 1.13
PMF1-205ENST00000497069 DISP3Q9P2K9 1392 aa22.1■■□□□ 1.13
PMF1-205ENST00000497069 USP32Q8NFA0 1604 aa22.09■■□□□ 1.13
PMF1-205ENST00000497069 PUS7Q96PZ0 661 aaKnown RBP22.09■■□□□ 1.13
PMF1-205ENST00000497069 PMFBP1Q8TBY8 1022 aa22.08■■□□□ 1.13
PMF1-205ENST00000497069 NGDNQ8NEJ9 315 aaKnown RBP22.07■■□□□ 1.12
PMF1-205ENST00000497069 PPIP5K1Q6PFW1 1433 aa22.06■■□□□ 1.12
PMF1-205ENST00000497069 ITSN1Q15811 1721 aa22.06■■□□□ 1.12
PMF1-205ENST00000497069 KIF1AQ12756 1690 aa22.06■■□□□ 1.12
PMF1-205ENST00000497069 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
PMF1-205ENST00000497069 FOXO3O43524 673 aa22.05■■□□□ 1.12
PMF1-205ENST00000497069 POLR3GLQ9BT43 218 aa22.05■■□□□ 1.12
PMF1-205ENST00000497069 CABP1Q9NZU7 370 aa22.05■■□□□ 1.12
PMF1-205ENST00000497069 TMC1Q8TDI8 760 aa22.04■■□□□ 1.12
PMF1-205ENST00000497069 RGPD8O14715 1765 aaPredicted RBP22.04■■□□□ 1.12
PMF1-205ENST00000497069 PLEKHG3A1L390 1219 aa22.03■■□□□ 1.12
PMF1-205ENST00000497069 PSME1Q06323 249 aa22.03■■□□□ 1.12
PMF1-205ENST00000497069 TOPAZ1Q8N9V7 1692 aa22.02■■□□□ 1.12
PMF1-205ENST00000497069 DDX17Q92841 729 aaKnown RBP22.02■■□□□ 1.12
PMF1-205ENST00000497069 AHDC1Q5TGY3 1603 aaPredicted RBP22.01■■□□□ 1.11
PMF1-205ENST00000497069 ACEP12821 1306 aa22.01■■□□□ 1.11
PMF1-205ENST00000497069 HSPA1LP34931 641 aa22■■□□□ 1.11
PMF1-205ENST00000497069 NINLQ9Y2I6 1382 aa21.99■■□□□ 1.11
PMF1-205ENST00000497069 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
PMF1-205ENST00000497069 KRT28Q7Z3Y7 464 aa21.99■■□□□ 1.11
PMF1-205ENST00000497069 PHLPP1O60346 1717 aa21.98■■□□□ 1.11
PMF1-205ENST00000497069 XPCQ01831 940 aaPredicted RBP21.98■■□□□ 1.11
PMF1-205ENST00000497069 POLR3AO14802 1390 aaPredicted RBP21.98■■□□□ 1.11
PMF1-205ENST00000497069 HDGFL2Q7Z4V5 671 aaPredicted RBP21.97■■□□□ 1.11
PMF1-205ENST00000497069 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
PMF1-205ENST00000497069 C11orf95C9JLR9 678 aaPredicted RBP21.96■■□□□ 1.11
PMF1-205ENST00000497069 ILDR1Q86SU0 546 aaPredicted RBP21.96■■□□□ 1.11
PMF1-205ENST00000497069 LRRC59Q96AG4 307 aaKnown RBP21.96■■□□□ 1.11
PMF1-205ENST00000497069 ZNF692Q9BU19 519 aaPredicted RBP21.96■■□□□ 1.11
PMF1-205ENST00000497069 TERF2IPQ9NYB0 399 aa21.96■■□□□ 1.11
PMF1-205ENST00000497069 SOS2Q07890 1332 aaPredicted RBP21.96■■□□□ 1.11
PMF1-205ENST00000497069 PXDNQ92626 1479 aa21.94■■□□□ 1.1
PMF1-205ENST00000497069 PAK3O75914 559 aaPredicted RBP21.93■■□□□ 1.1
PMF1-205ENST00000497069 KIF7Q2M1P5 1343 aa21.93■■□□□ 1.1
PMF1-205ENST00000497069 KTN1Q86UP2 1357 aaKnown RBP21.92■■□□□ 1.1
PMF1-205ENST00000497069 COL16A1Q07092 1604 aaPredicted RBP21.91■■□□□ 1.1
PMF1-205ENST00000497069 LMOD2Q6P5Q4 547 aa21.91■■□□□ 1.1
PMF1-205ENST00000497069 CPSF1Q10570 1443 aaKnown RBP21.9■■□□□ 1.1
PMF1-205ENST00000497069 SBNO1A3KN83 1393 aa21.9■■□□□ 1.1
PMF1-205ENST00000497069 BRD4O60885 1362 aaPredicted RBP21.9■■□□□ 1.1
PMF1-205ENST00000497069 CCDC7Q96M83 1385 aa21.9■■□□□ 1.1
PMF1-205ENST00000497069 USP6P35125 1406 aa21.89■■□□□ 1.1
PMF1-205ENST00000497069 ANKRD36BQ8N2N9 1353 aa21.89■■□□□ 1.1
PMF1-205ENST00000497069 A0A1W2PP64 1363 aa21.88■■□□□ 1.09
PMF1-205ENST00000497069 JCADQ9P266 1359 aa21.88■■□□□ 1.09
PMF1-205ENST00000497069 SPATA31A3Q5VYP0 1347 aa21.88■■□□□ 1.09
PMF1-205ENST00000497069 WASHC2AQ641Q2 1341 aa21.88■■□□□ 1.09
PMF1-205ENST00000497069 CD163L1Q9NR16 1453 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms