RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 SCAPERQ9BY12 1400 aa8.01□□□□□ -1.13
SGIP1-214ENST00000497055 NUTM2BA6NNL0 878 aaPredicted RBP8□□□□□ -1.13
SGIP1-214ENST00000497055 NUTM2EB1AL46 878 aaPredicted RBP8□□□□□ -1.13
SGIP1-214ENST00000497055 TULP1O00294 542 aaPredicted RBP8□□□□□ -1.13
SGIP1-214ENST00000497055 OSBPP22059 807 aa8□□□□□ -1.13
SGIP1-214ENST00000497055 MEX3CQ5U5Q3 659 aaKnown RBP8□□□□□ -1.13
SGIP1-214ENST00000497055 NUTM2DQ5VT03 806 aaPredicted RBP8□□□□□ -1.13
SGIP1-214ENST00000497055 NUTM2AQ8IVF1 878 aaPredicted RBP8□□□□□ -1.13
SGIP1-214ENST00000497055 ZDHHC16Q969W1 377 aa8□□□□□ -1.13
SGIP1-214ENST00000497055 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
SGIP1-214ENST00000497055 VWDEQ8N2E2 1590 aa8□□□□□ -1.13
SGIP1-214ENST00000497055 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
SGIP1-214ENST00000497055 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
SGIP1-214ENST00000497055 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
SGIP1-214ENST00000497055 CEP170BQ9Y4F5 1589 aaPredicted RBP7.99□□□□□ -1.13
SGIP1-214ENST00000497055 MYO3AQ8NEV4 1616 aa7.99□□□□□ -1.13
SGIP1-214ENST00000497055 ZNF142P52746 1687 aaPredicted RBP7.98□□□□□ -1.13
SGIP1-214ENST00000497055 POTEGQ6S5H5 508 aa7.97□□□□□ -1.13
SGIP1-214ENST00000497055 ZNF687Q8N1G0 1237 aa7.97□□□□□ -1.13
SGIP1-214ENST00000497055 CDK12Q9NYV4 1490 aaPredicted RBP7.97□□□□□ -1.13
SGIP1-214ENST00000497055 POTEMA6NI47 508 aa7.96□□□□□ -1.14
SGIP1-214ENST00000497055 EN1Q05925 392 aaPredicted RBP7.96□□□□□ -1.14
SGIP1-214ENST00000497055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.96□□□□□ -1.14
SGIP1-214ENST00000497055 FAM9AQ8IZU1 332 aaPredicted RBP7.96□□□□□ -1.14
SGIP1-214ENST00000497055 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.14
SGIP1-214ENST00000497055 BCL2L12Q9HB09 334 aa7.96□□□□□ -1.14
SGIP1-214ENST00000497055 NEURL4Q96JN8 1562 aa7.96□□□□□ -1.14
SGIP1-214ENST00000497055 ZMYM3Q14202 1370 aa7.96□□□□□ -1.14
SGIP1-214ENST00000497055 FAM135BQ49AJ0 1406 aa7.95□□□□□ -1.14
SGIP1-214ENST00000497055 GOLGA3Q08378 1498 aa7.95□□□□□ -1.14
SGIP1-214ENST00000497055 AGLP35573 1532 aa7.95□□□□□ -1.14
SGIP1-214ENST00000497055 PRIM1P49642 420 aaKnown RBP7.95□□□□□ -1.14
SGIP1-214ENST00000497055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.94□□□□□ -1.14
SGIP1-214ENST00000497055 RAPGEF6Q8TEU7 1601 aa7.94□□□□□ -1.14
SGIP1-214ENST00000497055 MAP3K7O43318 606 aa7.94□□□□□ -1.14
SGIP1-214ENST00000497055 C6orf132Q5T0Z8 1188 aa7.94□□□□□ -1.14
SGIP1-214ENST00000497055 RBM26Q5T8P6 1007 aaKnown RBP7.94□□□□□ -1.14
SGIP1-214ENST00000497055 POLR1AO95602 1720 aaPredicted RBP7.94□□□□□ -1.14
SGIP1-214ENST00000497055 JCADQ9P266 1359 aa7.94□□□□□ -1.14
SGIP1-214ENST00000497055 LRP5O75197 1615 aa7.93□□□□□ -1.14
SGIP1-214ENST00000497055 PTPREP23469 700 aa7.93□□□□□ -1.14
SGIP1-214ENST00000497055 PBX2P40425 430 aa7.93□□□□□ -1.14
SGIP1-214ENST00000497055 RGS12O14924 1447 aa7.93□□□□□ -1.14
SGIP1-214ENST00000497055 DIP2CQ9Y2E4 1556 aa7.93□□□□□ -1.14
SGIP1-214ENST00000497055 LRP6O75581 1613 aa7.92□□□□□ -1.14
SGIP1-214ENST00000497055 ARHGAP33O14559 1287 aa7.92□□□□□ -1.14
SGIP1-214ENST00000497055 ANKLE2Q86XL3 938 aa7.92□□□□□ -1.14
SGIP1-214ENST00000497055 ATAD2Q6PL18 1390 aa7.92□□□□□ -1.14
SGIP1-214ENST00000497055 SYNMO15061 1565 aa7.92□□□□□ -1.14
SGIP1-214ENST00000497055 TSR1Q2NL82 804 aaKnown RBP7.91□□□□□ -1.14
SGIP1-214ENST00000497055 LMOD2Q6P5Q4 547 aa7.91□□□□□ -1.14
SGIP1-214ENST00000497055 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
SGIP1-214ENST00000497055 AFAP1Q8N556 730 aa7.91□□□□□ -1.14
SGIP1-214ENST00000497055 NPHP4O75161 1426 aaPredicted RBP7.91□□□□□ -1.14
SGIP1-214ENST00000497055 A2ML1A8K2U0 1454 aa7.91□□□□□ -1.14
SGIP1-214ENST00000497055 STRCP1A6NGW2 1772 aa7.91□□□□□ -1.14
SGIP1-214ENST00000497055 MROH2AA6NES4 1674 aa7.9□□□□□ -1.14
SGIP1-214ENST00000497055 DNMT1P26358 1616 aaKnown RBP7.9□□□□□ -1.14
SGIP1-214ENST00000497055 REREQ9P2R6 1566 aa7.9□□□□□ -1.14
SGIP1-214ENST00000497055 CDK13Q14004 1512 aaKnown RBP7.9□□□□□ -1.14
SGIP1-214ENST00000497055 NUTM2FA1L443 756 aa7.9□□□□□ -1.14
SGIP1-214ENST00000497055 PLEKHD1A6NEE1 506 aa7.9□□□□□ -1.14
SGIP1-214ENST00000497055 KCNK17Q96T54 332 aa7.9□□□□□ -1.14
SGIP1-214ENST00000497055 AXIN2Q9Y2T1 843 aa7.9□□□□□ -1.14
SGIP1-214ENST00000497055 ROBO1Q9Y6N7 1651 aa7.89□□□□□ -1.15
SGIP1-214ENST00000497055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.89□□□□□ -1.15
SGIP1-214ENST00000497055 PSEN2P49810 448 aa7.89□□□□□ -1.15
SGIP1-214ENST00000497055 CDAN1Q8IWY9 1227 aa7.89□□□□□ -1.15
SGIP1-214ENST00000497055 ZNF518AQ6AHZ1 1483 aa7.88□□□□□ -1.15
SGIP1-214ENST00000497055 ABCA6Q8N139 1617 aa7.88□□□□□ -1.15
SGIP1-214ENST00000497055 AFF2P51816 1311 aa7.87□□□□□ -1.15
SGIP1-214ENST00000497055 SPATA31A6Q5VVP1 1343 aa7.87□□□□□ -1.15
SGIP1-214ENST00000497055 PPP1R3GB7ZBB8 358 aa7.87□□□□□ -1.15
SGIP1-214ENST00000497055 COL9A1P20849 921 aa7.87□□□□□ -1.15
SGIP1-214ENST00000497055 GPIHBP1Q8IV16 184 aa7.87□□□□□ -1.15
SGIP1-214ENST00000497055 CDHR5Q9HBB8 845 aa7.87□□□□□ -1.15
SGIP1-214ENST00000497055 NPDC1Q9NQX5 325 aaPredicted RBP7.87□□□□□ -1.15
SGIP1-214ENST00000497055 FCHSD2O94868 740 aa7.86□□□□□ -1.15
SGIP1-214ENST00000497055 RBM6P78332 1123 aaKnown RBP7.86□□□□□ -1.15
SGIP1-214ENST00000497055 PTGDRQ13258 359 aa7.86□□□□□ -1.15
SGIP1-214ENST00000497055 EFCAB2Q5VUJ9 269 aa7.86□□□□□ -1.15
SGIP1-214ENST00000497055 PCDH10Q9P2E7 1040 aa7.86□□□□□ -1.15
SGIP1-214ENST00000497055 PHLPP1O60346 1717 aa7.86□□□□□ -1.15
SGIP1-214ENST00000497055 PLCH2O75038 1416 aa7.86□□□□□ -1.15
SGIP1-214ENST00000497055 DMRTA1Q5VZB9 504 aa7.85□□□□□ -1.15
SGIP1-214ENST00000497055 CLTCQ00610 1675 aaKnown RBP7.85□□□□□ -1.15
SGIP1-214ENST00000497055 KDM5CP41229 1560 aa7.84□□□□□ -1.15
SGIP1-214ENST00000497055 MED14O60244 1454 aa7.84□□□□□ -1.15
SGIP1-214ENST00000497055 C1QTNF8P60827 252 aa7.84□□□□□ -1.15
SGIP1-214ENST00000497055 SLC4A5Q9BY07 1137 aa7.84□□□□□ -1.15
SGIP1-214ENST00000497055 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
SGIP1-214ENST00000497055 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
SGIP1-214ENST00000497055 QTRT2Q9H974 415 aaKnown RBP7.84□□□□□ -1.15
SGIP1-214ENST00000497055 ABCC1P33527 1531 aa7.83□□□□□ -1.16
SGIP1-214ENST00000497055 IQGAP1P46940 1657 aa7.83□□□□□ -1.16
SGIP1-214ENST00000497055 PRSS12P56730 875 aa7.83□□□□□ -1.16
SGIP1-214ENST00000497055 LSM11P83369 360 aaKnown RBP eCLIP7.83□□□□□ -1.16
SGIP1-214ENST00000497055 HIC1Q14526 733 aa7.83□□□□□ -1.16
SGIP1-214ENST00000497055 CCDC125Q86Z20 511 aa7.83□□□□□ -1.16
SGIP1-214ENST00000497055 ZBED2Q9BTP6 218 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms