RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	PPEF1	O14829	653 aa	Predicted RBP	14.23	□□□□□ -0.13
TARDBP-210	ENST00000496840	KDM4C	Q9H3R0	1056 aa		14.23	□□□□□ -0.13
TARDBP-210	ENST00000496840	RSBN1L	Q6PCB5	846 aa	Predicted RBP	14.22	□□□□□ -0.13
TARDBP-210	ENST00000496840	GPBP1L1	Q9HC44	474 aa	Predicted RBP	14.22	□□□□□ -0.13
TARDBP-210	ENST00000496840	SPTLC1	O15269	473 aa		14.21	□□□□□ -0.13
TARDBP-210	ENST00000496840	MMP16	P51512	607 aa		14.21	□□□□□ -0.13
TARDBP-210	ENST00000496840	RETREG3	Q86VR2	466 aa		14.21	□□□□□ -0.13
TARDBP-210	ENST00000496840	PRDM9	Q9NQV7	894 aa		14.21	□□□□□ -0.13
TARDBP-210	ENST00000496840	DXO	O77932	396 aa	Known RBP	14.18	□□□□□ -0.14
TARDBP-210	ENST00000496840	MYSM1	Q5VVJ2	828 aa		14.18	□□□□□ -0.14
TARDBP-210	ENST00000496840	SYMPK	Q92797	1274 aa	Known RBP	14.18	□□□□□ -0.14
TARDBP-210	ENST00000496840	C6orf229	H3BNL8	230 aa		14.17	□□□□□ -0.14
TARDBP-210	ENST00000496840	RIC3	Q7Z5B4	369 aa		14.17	□□□□□ -0.14
TARDBP-210	ENST00000496840	EMID1	Q96A84	441 aa	Predicted RBP	14.17	□□□□□ -0.14
TARDBP-210	ENST00000496840	DDRGK1	Q96HY6	314 aa		14.17	□□□□□ -0.14
TARDBP-210	ENST00000496840	SPDYE5	A6NIY4	337 aa		14.16	□□□□□ -0.14
TARDBP-210	ENST00000496840	SLC19A1	P41440	591 aa		14.16	□□□□□ -0.14
TARDBP-210	ENST00000496840	TUSC1	Q2TAM9	212 aa		14.16	□□□□□ -0.14
TARDBP-210	ENST00000496840	RSPH6A	Q9H0K4	717 aa		14.16	□□□□□ -0.14
TARDBP-210	ENST00000496840	FCF1	Q9Y324	198 aa	Known RBP	14.16	□□□□□ -0.14
TARDBP-210	ENST00000496840	MTMR2	Q13614	643 aa		14.15	□□□□□ -0.14
TARDBP-210	ENST00000496840	PLA2G2C	Q5R387	149 aa		14.15	□□□□□ -0.14
TARDBP-210	ENST00000496840	JUND	P17535	347 aa		14.13	□□□□□ -0.15
TARDBP-210	ENST00000496840	PRPF38B	Q5VTL8	546 aa	Known RBP	14.13	□□□□□ -0.15
TARDBP-210	ENST00000496840	FAM117A	Q9C073	453 aa		14.13	□□□□□ -0.15
TARDBP-210	ENST00000496840	LIAT1	Q6ZQX7	453 aa		14.12	□□□□□ -0.15
TARDBP-210	ENST00000496840	PCDHB15	Q9Y5E8	787 aa		14.12	□□□□□ -0.15
TARDBP-210	ENST00000496840	LIMD1	Q9UGP4	676 aa		14.11	□□□□□ -0.15
TARDBP-210	ENST00000496840	RPIA	P49247	311 aa		14.1	□□□□□ -0.15
TARDBP-210	ENST00000496840	NEUROD2	Q15784	382 aa		14.1	□□□□□ -0.15
TARDBP-210	ENST00000496840	SPRYD7	Q5W111	196 aa		14.1	□□□□□ -0.15
TARDBP-210	ENST00000496840	IRX2	Q9BZI1	471 aa	Predicted RBP	14.1	□□□□□ -0.15
TARDBP-210	ENST00000496840	ZBTB3	Q9H5J0	574 aa		14.1	□□□□□ -0.15
TARDBP-210	ENST00000496840	PLEKHG3	A1L390	1219 aa		14.08	□□□□□ -0.16
TARDBP-210	ENST00000496840	HRC	P23327	699 aa		14.08	□□□□□ -0.16
TARDBP-210	ENST00000496840	CLK2	P49760	499 aa	Known RBP	14.08	□□□□□ -0.16
TARDBP-210	ENST00000496840	DESI1	Q6ICB0	168 aa		14.08	□□□□□ -0.16
TARDBP-210	ENST00000496840	PRR7	Q8TB68	274 aa		14.08	□□□□□ -0.16
TARDBP-210	ENST00000496840	SH3D19	Q5HYK7	790 aa		14.07	□□□□□ -0.16
TARDBP-210	ENST00000496840	ZNF598	Q86UK7	904 aa	Known RBP	14.07	□□□□□ -0.16
TARDBP-210	ENST00000496840	BRPF1	P55201	1214 aa	Predicted RBP	14.06	□□□□□ -0.16
TARDBP-210	ENST00000496840	LILRB3	O75022	631 aa		14.04	□□□□□ -0.16
TARDBP-210	ENST00000496840	SKIV2L	Q15477	1246 aa	Known RBP	14.04	□□□□□ -0.16
TARDBP-210	ENST00000496840	PTPRN	Q16849	979 aa		14.03	□□□□□ -0.16
TARDBP-210	ENST00000496840	CSPP1	Q1MSJ5	1256 aa		14.03	□□□□□ -0.16
TARDBP-210	ENST00000496840	CABLES1	Q8TDN4	633 aa		14.03	□□□□□ -0.16
TARDBP-210	ENST00000496840	POLR3E	Q9NVU0	708 aa		14.03	□□□□□ -0.16
TARDBP-210	ENST00000496840	ZBTB24	O43167	697 aa	Predicted RBP	14.02	□□□□□ -0.17
TARDBP-210	ENST00000496840	LAPTM4A	Q15012	233 aa		14.02	□□□□□ -0.17
TARDBP-210	ENST00000496840	ZNF697	Q5TEC3	545 aa		14.02	□□□□□ -0.17
TARDBP-210	ENST00000496840	NUDT12	Q9BQG2	462 aa		14.02	□□□□□ -0.17
TARDBP-210	ENST00000496840	CFAP99	D6REC4	459 aa		14.01	□□□□□ -0.17
TARDBP-210	ENST00000496840	CD2BP2	O95400	341 aa	Known RBP	14.01	□□□□□ -0.17
TARDBP-210	ENST00000496840	QPCT	Q16769	361 aa		14.01	□□□□□ -0.17
TARDBP-210	ENST00000496840	CCNYL3	P0C7X3	344 aa		13.99	□□□□□ -0.17
TARDBP-210	ENST00000496840	CCDC24	Q8N4L8	307 aa		13.99	□□□□□ -0.17
TARDBP-210	ENST00000496840	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.98	□□□□□ -0.17
TARDBP-210	ENST00000496840	NUTM2E	B1AL46	878 aa	Predicted RBP	13.98	□□□□□ -0.17
TARDBP-210	ENST00000496840	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.98	□□□□□ -0.17
TARDBP-210	ENST00000496840	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.98	□□□□□ -0.17
TARDBP-210	ENST00000496840	GOPC	Q9HD26	462 aa		13.98	□□□□□ -0.17
TARDBP-210	ENST00000496840	PRKCSH	P14314	528 aa	Predicted RBP	13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	PRR20E	P86478	221 aa		13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	PRR20C	P86479	221 aa		13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	PRR20D	P86480	221 aa		13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	PRR20B	P86481	221 aa		13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	PRR20A	P86496	221 aa		13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	LYPD8	Q6UX82	237 aa		13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	TRIM67	Q6ZTA4	783 aa		13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
TARDBP-210	ENST00000496840	GFRA3	O60609	400 aa		13.96	□□□□□ -0.17
TARDBP-210	ENST00000496840	TRIM32	Q13049	653 aa		13.96	□□□□□ -0.17
TARDBP-210	ENST00000496840	PDZRN3	Q9UPQ7	1066 aa		13.96	□□□□□ -0.17
TARDBP-210	ENST00000496840	NRG2	O14511	850 aa	Predicted RBP	13.95	□□□□□ -0.18
TARDBP-210	ENST00000496840	EVA1B	Q9NVM1	165 aa		13.95	□□□□□ -0.18
TARDBP-210	ENST00000496840	GDF9	O60383	454 aa		13.94	□□□□□ -0.18
TARDBP-210	ENST00000496840	RTL5	Q5HYW3	569 aa	Predicted RBP	13.94	□□□□□ -0.18
TARDBP-210	ENST00000496840	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.92	□□□□□ -0.18
TARDBP-210	ENST00000496840	KCNH2	Q12809	1159 aa		13.91	□□□□□ -0.18
TARDBP-210	ENST00000496840	PPP2R2D	Q66LE6	453 aa		13.91	□□□□□ -0.18
TARDBP-210	ENST00000496840	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-210	ENST00000496840	IL27	Q8NEV9	243 aa		13.91	□□□□□ -0.18
TARDBP-210	ENST00000496840	HELB	Q8NG08	1087 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-210	ENST00000496840	PKD2L1	Q9P0L9	805 aa		13.91	□□□□□ -0.18
TARDBP-210	ENST00000496840	WNT7B	P56706	349 aa		13.89	□□□□□ -0.19
TARDBP-210	ENST00000496840	F12	P00748	615 aa	Predicted RBP	13.88	□□□□□ -0.19
TARDBP-210	ENST00000496840	TSC1	Q92574	1164 aa		13.87	□□□□□ -0.19
TARDBP-210	ENST00000496840	UNC93B1	Q9H1C4	597 aa		13.87	□□□□□ -0.19
TARDBP-210	ENST00000496840	WNT7A	O00755	349 aa		13.86	□□□□□ -0.19
TARDBP-210	ENST00000496840	PER1	O15534	1290 aa	Predicted RBP	13.86	□□□□□ -0.19
TARDBP-210	ENST00000496840	FOXC1	Q12948	553 aa		13.86	□□□□□ -0.19
TARDBP-210	ENST00000496840	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.86	□□□□□ -0.19
TARDBP-210	ENST00000496840	TNFRSF10A	O00220	468 aa		13.85	□□□□□ -0.19
TARDBP-210	ENST00000496840	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.85	□□□□□ -0.19
TARDBP-210	ENST00000496840	SKOR1	P84550	965 aa		13.84	□□□□□ -0.19
TARDBP-210	ENST00000496840	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.84	□□□□□ -0.19
TARDBP-210	ENST00000496840		Q6ZNB5	142 aa		13.83	□□□□□ -0.2
TARDBP-210	ENST00000496840	CTH	P32929	405 aa		13.82	□□□□□ -0.2
TARDBP-210	ENST00000496840	MAP10	Q9P2G4	905 aa		13.81	□□□□□ -0.2
TARDBP-210	ENST00000496840	RC3H1	Q5TC82	1133 aa	Known RBP	13.8	□□□□□ -0.2

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