RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
COL15A1-204ENST00000496686 ADAMTS13Q76LX8 1427 aa20.61■□□□□ 0.89
COL15A1-204ENST00000496686 RIMS1Q86UR5 1692 aaKnown RBP20.61■□□□□ 0.89
COL15A1-204ENST00000496686 CPS1P31327 1500 aa20.6■□□□□ 0.89
COL15A1-204ENST00000496686 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
COL15A1-204ENST00000496686 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
COL15A1-204ENST00000496686 MED14O60244 1454 aa20.6■□□□□ 0.89
COL15A1-204ENST00000496686 GTF3C3Q9Y5Q9 886 aa20.59■□□□□ 0.89
COL15A1-204ENST00000496686 METP08581 1390 aa20.59■□□□□ 0.89
COL15A1-204ENST00000496686 CNGB1Q14028 1251 aaPredicted RBP20.58■□□□□ 0.89
COL15A1-204ENST00000496686 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
COL15A1-204ENST00000496686 ANKRD36BQ8N2N9 1353 aa20.58■□□□□ 0.88
COL15A1-204ENST00000496686 CEP170BQ9Y4F5 1589 aaPredicted RBP20.57■□□□□ 0.88
COL15A1-204ENST00000496686 ZBED9Q6R2W3 1325 aa20.56■□□□□ 0.88
COL15A1-204ENST00000496686 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
COL15A1-204ENST00000496686 CARD14Q9BXL6 1004 aa20.56■□□□□ 0.88
COL15A1-204ENST00000496686 LTKP29376 864 aa20.55■□□□□ 0.88
COL15A1-204ENST00000496686 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
COL15A1-204ENST00000496686 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
COL15A1-204ENST00000496686 NSD2O96028 1365 aa20.54■□□□□ 0.88
COL15A1-204ENST00000496686 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
COL15A1-204ENST00000496686 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
COL15A1-204ENST00000496686 MINK1Q8N4C8 1332 aaPredicted RBP20.53■□□□□ 0.88
COL15A1-204ENST00000496686 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
COL15A1-204ENST00000496686 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL15A1-204ENST00000496686 CABP2Q9NPB3 220 aa20.52■□□□□ 0.88
COL15A1-204ENST00000496686 BCANQ96GW7 911 aa20.51■□□□□ 0.87
COL15A1-204ENST00000496686 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
COL15A1-204ENST00000496686 TBX22Q9Y458 520 aa20.51■□□□□ 0.87
COL15A1-204ENST00000496686 PLEKHH1Q9ULM0 1364 aa20.5■□□□□ 0.87
COL15A1-204ENST00000496686 CGNL1Q0VF96 1302 aa20.5■□□□□ 0.87
COL15A1-204ENST00000496686 CDK19Q9BWU1 502 aa20.49■□□□□ 0.87
COL15A1-204ENST00000496686 ADGRB2O60241 1585 aa20.48■□□□□ 0.87
COL15A1-204ENST00000496686 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
COL15A1-204ENST00000496686 WAPLQ7Z5K2 1190 aa20.47■□□□□ 0.87
COL15A1-204ENST00000496686 ATP7BP35670 1465 aa20.47■□□□□ 0.87
COL15A1-204ENST00000496686 PIK3R4Q99570 1358 aa20.46■□□□□ 0.87
COL15A1-204ENST00000496686 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
COL15A1-204ENST00000496686 BLMP54132 1417 aaPredicted RBP20.45■□□□□ 0.86
COL15A1-204ENST00000496686 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
COL15A1-204ENST00000496686 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
COL15A1-204ENST00000496686 CD163L1Q9NR16 1453 aa20.44■□□□□ 0.86
COL15A1-204ENST00000496686 WASLO00401 505 aaPredicted RBP20.44■□□□□ 0.86
COL15A1-204ENST00000496686 ROBO2Q9HCK4 1378 aa20.44■□□□□ 0.86
COL15A1-204ENST00000496686 HDGFL2Q7Z4V5 671 aaPredicted RBP20.43■□□□□ 0.86
COL15A1-204ENST00000496686 PTPRUQ92729 1446 aa20.43■□□□□ 0.86
COL15A1-204ENST00000496686 SETD1BQ9UPS6 1966 aaKnown RBP20.42■□□□□ 0.86
COL15A1-204ENST00000496686 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
COL15A1-204ENST00000496686 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
COL15A1-204ENST00000496686 XRN1Q8IZH2 1706 aaKnown RBP20.4■□□□□ 0.86
COL15A1-204ENST00000496686 ANKLE2Q86XL3 938 aa20.39■□□□□ 0.85
COL15A1-204ENST00000496686 SLC26A8Q96RN1 970 aa20.38■□□□□ 0.85
COL15A1-204ENST00000496686 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
COL15A1-204ENST00000496686 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
COL15A1-204ENST00000496686 CABP1Q9NZU7 370 aa20.36■□□□□ 0.85
COL15A1-204ENST00000496686 AMOTL2Q9Y2J4 779 aa20.36■□□□□ 0.85
COL15A1-204ENST00000496686 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
COL15A1-204ENST00000496686 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
COL15A1-204ENST00000496686 CDC42BPGQ6DT37 1551 aa20.35■□□□□ 0.85
COL15A1-204ENST00000496686 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.35■□□□□ 0.85
COL15A1-204ENST00000496686 PPIP5K1Q6PFW1 1433 aa20.35■□□□□ 0.85
COL15A1-204ENST00000496686 NUDT16Q96DE0 195 aaKnown RBP20.34■□□□□ 0.85
COL15A1-204ENST00000496686 CCDC61Q9Y6R9 512 aa20.34■□□□□ 0.85
COL15A1-204ENST00000496686 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.84
COL15A1-204ENST00000496686 PDE3BQ13370 1112 aa20.32■□□□□ 0.84
COL15A1-204ENST00000496686 TOPAZ1Q8N9V7 1692 aa20.31■□□□□ 0.84
COL15A1-204ENST00000496686 NEFLP07196 543 aa20.3■□□□□ 0.84
COL15A1-204ENST00000496686 ADAMTS8Q9UP79 889 aa20.3■□□□□ 0.84
COL15A1-204ENST00000496686 KIF20BQ96Q89 1820 aa20.3■□□□□ 0.84
COL15A1-204ENST00000496686 FYB1O15117 783 aa20.29■□□□□ 0.84
COL15A1-204ENST00000496686 CFAP53Q96M91 514 aa20.29■□□□□ 0.84
COL15A1-204ENST00000496686 ZNF692Q9BU19 519 aaPredicted RBP20.29■□□□□ 0.84
COL15A1-204ENST00000496686 NUDCQ9Y266 331 aa20.29■□□□□ 0.84
COL15A1-204ENST00000496686 NPHP4O75161 1426 aaPredicted RBP20.28■□□□□ 0.84
COL15A1-204ENST00000496686 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
COL15A1-204ENST00000496686 PRR36Q9H6K5 1346 aa20.27■□□□□ 0.84
COL15A1-204ENST00000496686 AKAP12Q02952 1782 aa20.27■□□□□ 0.84
COL15A1-204ENST00000496686 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.84
COL15A1-204ENST00000496686 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
COL15A1-204ENST00000496686 ANKARQ7Z5J8 1434 aa20.26■□□□□ 0.83
COL15A1-204ENST00000496686 ITSN1Q15811 1721 aa20.25■□□□□ 0.83
COL15A1-204ENST00000496686 SHPRHQ149N8 1683 aa20.24■□□□□ 0.83
COL15A1-204ENST00000496686 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
COL15A1-204ENST00000496686 SUPT16HQ9Y5B9 1047 aaKnown RBP20.24■□□□□ 0.83
COL15A1-204ENST00000496686 CHD2O14647 1828 aaKnown RBP20.24■□□□□ 0.83
COL15A1-204ENST00000496686 KCNA6P17658 529 aa20.23■□□□□ 0.83
COL15A1-204ENST00000496686 MTHFSP49914 203 aa20.23■□□□□ 0.83
COL15A1-204ENST00000496686 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
COL15A1-204ENST00000496686 NWD1Q149M9 1564 aa20.21■□□□□ 0.83
COL15A1-204ENST00000496686 NRKQ7Z2Y5 1582 aa20.21■□□□□ 0.83
COL15A1-204ENST00000496686 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
COL15A1-204ENST00000496686 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
COL15A1-204ENST00000496686 AATKQ6ZMQ8 1374 aa20.19■□□□□ 0.82
COL15A1-204ENST00000496686 FMN2Q9NZ56 1722 aa20.18■□□□□ 0.82
COL15A1-204ENST00000496686 PNPLA6Q8IY17 1366 aa20.18■□□□□ 0.82
COL15A1-204ENST00000496686 USP6P35125 1406 aa20.18■□□□□ 0.82
COL15A1-204ENST00000496686 NKTRP30414 1462 aaKnown RBP20.18■□□□□ 0.82
COL15A1-204ENST00000496686 FKBP8Q14318 412 aa20.17■□□□□ 0.82
COL15A1-204ENST00000496686 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
COL15A1-204ENST00000496686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms