RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
U2AF1-212ENST00000496462 METP08581 1390 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 MYO5BQ9ULV0 1848 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 NEFMP07197 916 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 WAPLQ7Z5K2 1190 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 ADAMTS13Q76LX8 1427 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 WASLO00401 505 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-212ENST00000496462 NBPF8Q3BBV2 869 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 CDK19Q9BWU1 502 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
U2AF1-212ENST00000496462 PIK3C2GO75747 1445 aa11.73□□□□□ -0.53
U2AF1-212ENST00000496462 NCOA3Q9Y6Q9 1424 aa11.73□□□□□ -0.53
U2AF1-212ENST00000496462 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
U2AF1-212ENST00000496462 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
U2AF1-212ENST00000496462 MEX3CQ5U5Q3 659 aaKnown RBP11.72□□□□□ -0.53
U2AF1-212ENST00000496462 NPHP3Q7Z494 1330 aa11.72□□□□□ -0.53
U2AF1-212ENST00000496462 PUS7Q96PZ0 661 aaKnown RBP11.72□□□□□ -0.53
U2AF1-212ENST00000496462 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
U2AF1-212ENST00000496462 FAM135BQ49AJ0 1406 aa11.72□□□□□ -0.53
U2AF1-212ENST00000496462 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
U2AF1-212ENST00000496462 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.53
U2AF1-212ENST00000496462 ANP32CO43423 234 aa11.71□□□□□ -0.54
U2AF1-212ENST00000496462 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.54
U2AF1-212ENST00000496462 ZBTB7CA1YPR0 619 aa11.7□□□□□ -0.54
U2AF1-212ENST00000496462 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-212ENST00000496462 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-212ENST00000496462 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-212ENST00000496462 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-212ENST00000496462 NINLQ9Y2I6 1382 aa11.69□□□□□ -0.54
U2AF1-212ENST00000496462 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
U2AF1-212ENST00000496462 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
U2AF1-212ENST00000496462 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
U2AF1-212ENST00000496462 NEXMIFQ5QGS0 1516 aa11.69□□□□□ -0.54
U2AF1-212ENST00000496462 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
U2AF1-212ENST00000496462 LAMC1P11047 1609 aa11.68□□□□□ -0.54
U2AF1-212ENST00000496462 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
U2AF1-212ENST00000496462 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
U2AF1-212ENST00000496462 NLRP13Q86W25 1043 aa11.67□□□□□ -0.54
U2AF1-212ENST00000496462 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
U2AF1-212ENST00000496462 PTCH1Q13635 1447 aa11.67□□□□□ -0.54
U2AF1-212ENST00000496462 COG3Q96JB2 828 aa11.67□□□□□ -0.54
U2AF1-212ENST00000496462 CGNL1Q0VF96 1302 aa11.66□□□□□ -0.54
U2AF1-212ENST00000496462 PMFBP1Q8TBY8 1022 aa11.66□□□□□ -0.54
U2AF1-212ENST00000496462 ROBO2Q9HCK4 1378 aa11.65□□□□□ -0.54
U2AF1-212ENST00000496462 XPCQ01831 940 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-212ENST00000496462 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
U2AF1-212ENST00000496462 KRT28Q7Z3Y7 464 aa11.65□□□□□ -0.54
U2AF1-212ENST00000496462 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
U2AF1-212ENST00000496462 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
U2AF1-212ENST00000496462 MORC1Q86VD1 984 aa11.65□□□□□ -0.55
U2AF1-212ENST00000496462 ORAI2Q96SN7 254 aa11.64□□□□□ -0.55
U2AF1-212ENST00000496462 CABP1Q9NZU7 370 aa11.64□□□□□ -0.55
U2AF1-212ENST00000496462 ILDR2Q71H61 639 aa11.64□□□□□ -0.55
U2AF1-212ENST00000496462 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
U2AF1-212ENST00000496462 FOXO3O43524 673 aa11.63□□□□□ -0.55
U2AF1-212ENST00000496462 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
U2AF1-212ENST00000496462 NLRP6P59044 892 aa11.63□□□□□ -0.55
U2AF1-212ENST00000496462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
U2AF1-212ENST00000496462 NUDCQ9Y266 331 aa11.62□□□□□ -0.55
U2AF1-212ENST00000496462 SBNO2Q9Y2G9 1366 aa11.62□□□□□ -0.55
U2AF1-212ENST00000496462 CSB-PGBD3P0DP91 1061 aa11.62□□□□□ -0.55
U2AF1-212ENST00000496462 KTN1Q86UP2 1357 aaKnown RBP11.62□□□□□ -0.55
U2AF1-212ENST00000496462 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
U2AF1-212ENST00000496462 DCCP43146 1447 aa11.61□□□□□ -0.55
U2AF1-212ENST00000496462 KCNH5Q8NCM2 988 aa11.61□□□□□ -0.55
U2AF1-212ENST00000496462 CCDC9Q9Y3X0 531 aaKnown RBP11.61□□□□□ -0.55
U2AF1-212ENST00000496462 DLC1Q96QB1 1528 aa11.61□□□□□ -0.55
U2AF1-212ENST00000496462 EVA1CP58658 441 aa11.61□□□□□ -0.55
U2AF1-212ENST00000496462 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
U2AF1-212ENST00000496462 ANKARQ7Z5J8 1434 aa11.61□□□□□ -0.55
U2AF1-212ENST00000496462 TTC21AQ8NDW8 1320 aa11.61□□□□□ -0.55
U2AF1-212ENST00000496462 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
U2AF1-212ENST00000496462 AMPHP49418 695 aa11.6□□□□□ -0.55
U2AF1-212ENST00000496462 TECPR2O15040 1411 aa11.6□□□□□ -0.55
U2AF1-212ENST00000496462 CHD2O14647 1828 aaKnown RBP11.6□□□□□ -0.55
U2AF1-212ENST00000496462 A0A0G2JS52 829 aa11.6□□□□□ -0.55
U2AF1-212ENST00000496462 MYT1Q01538 1121 aa11.6□□□□□ -0.55
U2AF1-212ENST00000496462 PLEKHH1Q9ULM0 1364 aa11.6□□□□□ -0.55
U2AF1-212ENST00000496462 NWD1Q149M9 1564 aa11.6□□□□□ -0.55
U2AF1-212ENST00000496462 JCADQ9P266 1359 aa11.59□□□□□ -0.55
U2AF1-212ENST00000496462 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
U2AF1-212ENST00000496462 SOX12O15370 315 aa11.59□□□□□ -0.55
U2AF1-212ENST00000496462 ARHGEF10O15013 1369 aa11.59□□□□□ -0.55
U2AF1-212ENST00000496462 PNNQ9H307 717 aaKnown RBP11.59□□□□□ -0.55
U2AF1-212ENST00000496462 PANK3Q9H999 370 aa11.59□□□□□ -0.55
U2AF1-212ENST00000496462 ACEP12821 1306 aa11.58□□□□□ -0.56
U2AF1-212ENST00000496462 PLEKHG3A1L390 1219 aa11.58□□□□□ -0.56
U2AF1-212ENST00000496462 PPIP5K1Q6PFW1 1433 aa11.57□□□□□ -0.56
U2AF1-212ENST00000496462 PPLO60437 1756 aa11.57□□□□□ -0.56
U2AF1-212ENST00000496462 SLC12A5Q9H2X9 1139 aa11.57□□□□□ -0.56
U2AF1-212ENST00000496462 ROBO1Q9Y6N7 1651 aa11.57□□□□□ -0.56
U2AF1-212ENST00000496462 C8orf37Q96NL8 207 aa11.57□□□□□ -0.56
U2AF1-212ENST00000496462 NRXN3Q9Y4C0 1643 aa11.57□□□□□ -0.56
U2AF1-212ENST00000496462 PRDM11Q9NQV5 511 aa11.56□□□□□ -0.56
U2AF1-212ENST00000496462 MST1RQ04912 1400 aa11.55□□□□□ -0.56
U2AF1-212ENST00000496462 WDR43Q15061 677 aaKnown RBP eCLIP11.55□□□□□ -0.56
U2AF1-212ENST00000496462 RALBP1Q15311 655 aa11.55□□□□□ -0.56
U2AF1-212ENST00000496462 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
U2AF1-212ENST00000496462 CCDC7Q96M83 1385 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms