RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
ATG3-209ENST00000496423 BRWD3Q6RI45 1802 aa18.22■□□□□ 0.51
ATG3-209ENST00000496423 KRT27Q7Z3Y8 459 aa18.22■□□□□ 0.51
ATG3-209ENST00000496423 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
ATG3-209ENST00000496423 MYOM2P54296 1465 aa18.21■□□□□ 0.51
ATG3-209ENST00000496423 METP08581 1390 aa18.2■□□□□ 0.5
ATG3-209ENST00000496423 APLP2Q06481 763 aa18.2■□□□□ 0.5
ATG3-209ENST00000496423 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
ATG3-209ENST00000496423 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
ATG3-209ENST00000496423 ESCO1Q5FWF5 840 aa18.18■□□□□ 0.5
ATG3-209ENST00000496423 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
ATG3-209ENST00000496423 GLI3P10071 1580 aa18.17■□□□□ 0.5
ATG3-209ENST00000496423 NRXN3Q9Y4C0 1643 aa18.17■□□□□ 0.5
ATG3-209ENST00000496423 ADGRL2O95490 1459 aa18.17■□□□□ 0.5
ATG3-209ENST00000496423 E9PCH4 1651 aa18.16■□□□□ 0.5
ATG3-209ENST00000496423 HAP1P54257 671 aaPredicted RBP18.16■□□□□ 0.5
ATG3-209ENST00000496423 R3HDM1Q15032 1099 aaKnown RBP18.16■□□□□ 0.5
ATG3-209ENST00000496423 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
ATG3-209ENST00000496423 A0A0G2JS52 829 aa18.15■□□□□ 0.5
ATG3-209ENST00000496423 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
ATG3-209ENST00000496423 MYT1Q01538 1121 aa18.15■□□□□ 0.5
ATG3-209ENST00000496423 SLIT2O94813 1529 aa18.14■□□□□ 0.49
ATG3-209ENST00000496423 VPS72Q15906 364 aa18.14■□□□□ 0.49
ATG3-209ENST00000496423 MSH5O43196 834 aa18.13■□□□□ 0.49
ATG3-209ENST00000496423 FOXO3O43524 673 aa18.12■□□□□ 0.49
ATG3-209ENST00000496423 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
ATG3-209ENST00000496423 IFFO2Q5TF58 517 aa18.12■□□□□ 0.49
ATG3-209ENST00000496423 PXDNQ92626 1479 aa18.08■□□□□ 0.49
ATG3-209ENST00000496423 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.48
ATG3-209ENST00000496423 RGPD1P0DJD0 1748 aa18.08■□□□□ 0.48
ATG3-209ENST00000496423 HFM1A2PYH4 1435 aa18.07■□□□□ 0.48
ATG3-209ENST00000496423 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
ATG3-209ENST00000496423 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
ATG3-209ENST00000496423 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
ATG3-209ENST00000496423 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
ATG3-209ENST00000496423 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
ATG3-209ENST00000496423 NWD2Q9ULI1 1742 aa18.04■□□□□ 0.48
ATG3-209ENST00000496423 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
ATG3-209ENST00000496423 NUP155O75694 1391 aa18.04■□□□□ 0.48
ATG3-209ENST00000496423 USP32Q8NFA0 1604 aa18.03■□□□□ 0.48
ATG3-209ENST00000496423 PSME1Q06323 249 aa18.02■□□□□ 0.48
ATG3-209ENST00000496423 NBPF8Q3BBV2 869 aa18.02■□□□□ 0.48
ATG3-209ENST00000496423 NBPF14Q5TI25 921 aa18.02■□□□□ 0.48
ATG3-209ENST00000496423 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
ATG3-209ENST00000496423 KCNA4P22459 653 aa18■□□□□ 0.47
ATG3-209ENST00000496423 EZH2Q15910 746 aaKnown RBP18■□□□□ 0.47
ATG3-209ENST00000496423 FAM98CQ17RN3 349 aaKnown RBP18■□□□□ 0.47
ATG3-209ENST00000496423 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
ATG3-209ENST00000496423 CCDC144AA2RUR9 1427 aa17.99■□□□□ 0.47
ATG3-209ENST00000496423 DISP2A7MBM2 1401 aa17.99■□□□□ 0.47
ATG3-209ENST00000496423 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
ATG3-209ENST00000496423 SPON1Q9HCB6 807 aa17.98■□□□□ 0.47
ATG3-209ENST00000496423 PLCH1Q4KWH8 1693 aa17.98■□□□□ 0.47
ATG3-209ENST00000496423 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
ATG3-209ENST00000496423 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
ATG3-209ENST00000496423 PARD3Q8TEW0 1356 aa17.97■□□□□ 0.47
ATG3-209ENST00000496423 KIF1BO60333 1816 aa17.96■□□□□ 0.47
ATG3-209ENST00000496423 NINLQ9Y2I6 1382 aa17.96■□□□□ 0.47
ATG3-209ENST00000496423 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
ATG3-209ENST00000496423 ADGRB2O60241 1585 aa17.96■□□□□ 0.46
ATG3-209ENST00000496423 LMOD2Q6P5Q4 547 aa17.95■□□□□ 0.46
ATG3-209ENST00000496423 CAMKK2Q96RR4 588 aa17.95■□□□□ 0.46
ATG3-209ENST00000496423 KIF1AQ12756 1690 aa17.94■□□□□ 0.46
ATG3-209ENST00000496423 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
ATG3-209ENST00000496423 APBA3O96018 575 aa17.94■□□□□ 0.46
ATG3-209ENST00000496423 FAM196AQ6ZSG2 479 aa17.94■□□□□ 0.46
ATG3-209ENST00000496423 KCNQ2O43526 872 aa17.93■□□□□ 0.46
ATG3-209ENST00000496423 CABLES1Q8TDN4 633 aa17.93■□□□□ 0.46
ATG3-209ENST00000496423 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
ATG3-209ENST00000496423 FAM182BQ5T319 152 aa17.92■□□□□ 0.46
ATG3-209ENST00000496423 ZNF784Q8NCA9 323 aaPredicted RBP17.92■□□□□ 0.46
ATG3-209ENST00000496423 RPGRIP1LQ68CZ1 1315 aa17.92■□□□□ 0.46
ATG3-209ENST00000496423 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
ATG3-209ENST00000496423 NAIPQ13075 1403 aa17.91■□□□□ 0.46
ATG3-209ENST00000496423 TNS3Q68CZ2 1445 aa17.91■□□□□ 0.46
ATG3-209ENST00000496423 BTG4Q9NY30 223 aa17.91■□□□□ 0.46
ATG3-209ENST00000496423 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
ATG3-209ENST00000496423 TNS1Q9HBL0 1735 aaKnown RBP17.9■□□□□ 0.46
ATG3-209ENST00000496423 TRIM37O94972 964 aa17.9■□□□□ 0.46
ATG3-209ENST00000496423 C1QTNF8P60827 252 aa17.9■□□□□ 0.46
ATG3-209ENST00000496423 PHF8Q9UPP1 1060 aa17.87■□□□□ 0.45
ATG3-209ENST00000496423 SBNO1A3KN83 1393 aa17.87■□□□□ 0.45
ATG3-209ENST00000496423 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
ATG3-209ENST00000496423 SPATA31A5Q5VU36 1347 aa17.85■□□□□ 0.45
ATG3-209ENST00000496423 SPATA31A7Q8IWB4 1347 aa17.85■□□□□ 0.45
ATG3-209ENST00000496423 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
ATG3-209ENST00000496423 STK26Q9P289 416 aa17.84■□□□□ 0.45
ATG3-209ENST00000496423 COL14A1Q05707 1796 aaKnown RBP17.83■□□□□ 0.44
ATG3-209ENST00000496423 NRAPQ86VF7 1730 aa17.83■□□□□ 0.44
ATG3-209ENST00000496423 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.44
ATG3-209ENST00000496423 PDE3BQ13370 1112 aa17.82■□□□□ 0.44
ATG3-209ENST00000496423 ABCA3Q99758 1704 aa17.81■□□□□ 0.44
ATG3-209ENST00000496423 RREB1Q92766 1687 aa17.8■□□□□ 0.44
ATG3-209ENST00000496423 CHD4Q14839 1912 aa17.78■□□□□ 0.44
ATG3-209ENST00000496423 NUP188Q5SRE5 1749 aa17.78■□□□□ 0.44
ATG3-209ENST00000496423 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
ATG3-209ENST00000496423 CAMTA1Q9Y6Y1 1673 aa17.78■□□□□ 0.44
ATG3-209ENST00000496423 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
ATG3-209ENST00000496423 RRBP1Q9P2E9 1410 aaKnown RBP17.78■□□□□ 0.44
ATG3-209ENST00000496423 TECPR2O15040 1411 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms