RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
UBP1-213ENST00000496310 RGPD8O14715 1765 aaPredicted RBP10.98□□□□□ -0.65
UBP1-213ENST00000496310 NUTM2FA1L443 756 aa10.97□□□□□ -0.65
UBP1-213ENST00000496310 PPARGC1BQ86YN6 1023 aaKnown RBP10.97□□□□□ -0.65
UBP1-213ENST00000496310 ROBO2Q9HCK4 1378 aa10.97□□□□□ -0.65
UBP1-213ENST00000496310 BCL9LQ86UU0 1499 aa10.97□□□□□ -0.65
UBP1-213ENST00000496310 GLI3P10071 1580 aa10.95□□□□□ -0.66
UBP1-213ENST00000496310 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
UBP1-213ENST00000496310 FOXO3O43524 673 aa10.95□□□□□ -0.66
UBP1-213ENST00000496310 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
UBP1-213ENST00000496310 GJD4Q96KN9 370 aaPredicted RBP10.95□□□□□ -0.66
UBP1-213ENST00000496310 PSDA5PKW4 1024 aaPredicted RBP10.94□□□□□ -0.66
UBP1-213ENST00000496310 MYOM2P54296 1465 aa10.93□□□□□ -0.66
UBP1-213ENST00000496310 PPLO60437 1756 aa10.93□□□□□ -0.66
UBP1-213ENST00000496310 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.93□□□□□ -0.66
UBP1-213ENST00000496310 ROCK1Q13464 1354 aa10.92□□□□□ -0.66
UBP1-213ENST00000496310 CCDC125Q86Z20 511 aa10.92□□□□□ -0.66
UBP1-213ENST00000496310 RALGAPBQ86X10 1494 aa10.92□□□□□ -0.66
UBP1-213ENST00000496310 PXDNQ92626 1479 aa10.92□□□□□ -0.66
UBP1-213ENST00000496310 WAPLQ7Z5K2 1190 aa10.9□□□□□ -0.66
UBP1-213ENST00000496310 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.66
UBP1-213ENST00000496310 STK26Q9P289 416 aa10.9□□□□□ -0.66
UBP1-213ENST00000496310 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
UBP1-213ENST00000496310 PLCH1Q4KWH8 1693 aa10.89□□□□□ -0.67
UBP1-213ENST00000496310 LRP5O75197 1615 aa10.89□□□□□ -0.67
UBP1-213ENST00000496310 UNC5CLQ8IV45 518 aa10.89□□□□□ -0.67
UBP1-213ENST00000496310 SEPT12Q8IYM1 358 aa10.89□□□□□ -0.67
UBP1-213ENST00000496310 NPHP3Q7Z494 1330 aa10.88□□□□□ -0.67
UBP1-213ENST00000496310 CCDC9Q9Y3X0 531 aaKnown RBP10.88□□□□□ -0.67
UBP1-213ENST00000496310 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
UBP1-213ENST00000496310 SF3B2Q13435 895 aaKnown RBP10.87□□□□□ -0.67
UBP1-213ENST00000496310 SLIT2O94813 1529 aa10.87□□□□□ -0.67
UBP1-213ENST00000496310 PLEKHH1Q9ULM0 1364 aa10.87□□□□□ -0.67
UBP1-213ENST00000496310 ABCA3Q99758 1704 aa10.87□□□□□ -0.67
UBP1-213ENST00000496310 CDC42BPGQ6DT37 1551 aa10.86□□□□□ -0.67
UBP1-213ENST00000496310 NAIPQ13075 1403 aa10.86□□□□□ -0.67
UBP1-213ENST00000496310 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
UBP1-213ENST00000496310 FAM182BQ5T319 152 aa10.86□□□□□ -0.67
UBP1-213ENST00000496310 FMN2Q9NZ56 1722 aa10.86□□□□□ -0.67
UBP1-213ENST00000496310 IFT172Q9UG01 1749 aa10.86□□□□□ -0.67
UBP1-213ENST00000496310 HFM1A2PYH4 1435 aa10.85□□□□□ -0.67
UBP1-213ENST00000496310 A0A0G2JS52 829 aa10.85□□□□□ -0.67
UBP1-213ENST00000496310 HAP1P54257 671 aaPredicted RBP10.85□□□□□ -0.67
UBP1-213ENST00000496310 MYT1Q01538 1121 aa10.85□□□□□ -0.67
UBP1-213ENST00000496310 TMEM132EQ6IEE7 984 aa10.85□□□□□ -0.67
UBP1-213ENST00000496310 SPATA31A3Q5VYP0 1347 aa10.84□□□□□ -0.67
UBP1-213ENST00000496310 NWD2Q9ULI1 1742 aa10.84□□□□□ -0.67
UBP1-213ENST00000496310 HRCP23327 699 aa10.84□□□□□ -0.67
UBP1-213ENST00000496310 LMOD2Q6P5Q4 547 aa10.84□□□□□ -0.67
UBP1-213ENST00000496310 KRT28Q7Z3Y7 464 aa10.84□□□□□ -0.67
UBP1-213ENST00000496310 KRT27Q7Z3Y8 459 aa10.84□□□□□ -0.67
UBP1-213ENST00000496310 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
UBP1-213ENST00000496310 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
UBP1-213ENST00000496310 RGL3Q3MIN7 710 aa10.82□□□□□ -0.68
UBP1-213ENST00000496310 KIF1AQ12756 1690 aa10.82□□□□□ -0.68
UBP1-213ENST00000496310 RGPD1P0DJD0 1748 aa10.81□□□□□ -0.68
UBP1-213ENST00000496310 NRAPQ86VF7 1730 aa10.81□□□□□ -0.68
UBP1-213ENST00000496310 LRPPRCP42704 1394 aaKnown RBP10.81□□□□□ -0.68
UBP1-213ENST00000496310 FAM83GA6ND36 823 aa10.81□□□□□ -0.68
UBP1-213ENST00000496310 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
UBP1-213ENST00000496310 VPS72Q15906 364 aa10.81□□□□□ -0.68
UBP1-213ENST00000496310 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
UBP1-213ENST00000496310 KNDC1Q76NI1 1749 aa10.81□□□□□ -0.68
UBP1-213ENST00000496310 PRAG1Q86YV5 1406 aa10.8□□□□□ -0.68
UBP1-213ENST00000496310 TNS1Q9HBL0 1735 aaKnown RBP10.8□□□□□ -0.68
UBP1-213ENST00000496310 BAG6P46379 1132 aa10.79□□□□□ -0.68
UBP1-213ENST00000496310 SAFB2Q14151 953 aaKnown RBP eCLIP10.79□□□□□ -0.68
UBP1-213ENST00000496310 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
UBP1-213ENST00000496310 EZH2Q15910 746 aaKnown RBP10.78□□□□□ -0.68
UBP1-213ENST00000496310 PMFBP1Q8TBY8 1022 aa10.78□□□□□ -0.68
UBP1-213ENST00000496310 PHF8Q9UPP1 1060 aa10.78□□□□□ -0.68
UBP1-213ENST00000496310 RPGRIP1LQ68CZ1 1315 aa10.78□□□□□ -0.68
UBP1-213ENST00000496310 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.68
UBP1-213ENST00000496310 TNS3Q68CZ2 1445 aa10.77□□□□□ -0.68
UBP1-213ENST00000496310 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.69
UBP1-213ENST00000496310 RRBP1Q9P2E9 1410 aaKnown RBP10.76□□□□□ -0.69
UBP1-213ENST00000496310 PSME1Q06323 249 aa10.76□□□□□ -0.69
UBP1-213ENST00000496310 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
UBP1-213ENST00000496310 TRPM3Q9HCF6 1732 aaPredicted RBP10.75□□□□□ -0.69
UBP1-213ENST00000496310 TRIM37O94972 964 aa10.74□□□□□ -0.69
UBP1-213ENST00000496310 COL14A1Q05707 1796 aaKnown RBP10.74□□□□□ -0.69
UBP1-213ENST00000496310 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
UBP1-213ENST00000496310 TECPR2O15040 1411 aa10.74□□□□□ -0.69
UBP1-213ENST00000496310 YTHDC2Q9H6S0 1430 aaKnown RBP10.74□□□□□ -0.69
UBP1-213ENST00000496310 ALS2Q96Q42 1657 aa10.73□□□□□ -0.69
UBP1-213ENST00000496310 YY1P25490 414 aa10.73□□□□□ -0.69
UBP1-213ENST00000496310 NRXN1Q9ULB1 1477 aa10.73□□□□□ -0.69
UBP1-213ENST00000496310 CAMTA1Q9Y6Y1 1673 aa10.73□□□□□ -0.69
UBP1-213ENST00000496310 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
UBP1-213ENST00000496310 SBNO1A3KN83 1393 aa10.72□□□□□ -0.69
UBP1-213ENST00000496310 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
UBP1-213ENST00000496310 NUP188Q5SRE5 1749 aa10.72□□□□□ -0.69
UBP1-213ENST00000496310 CFAP70Q5T0N1 1121 aa10.71□□□□□ -0.69
UBP1-213ENST00000496310 PIAS4Q8N2W9 510 aaPredicted RBP10.71□□□□□ -0.69
UBP1-213ENST00000496310 PRAM1Q96QH2 718 aa10.71□□□□□ -0.69
UBP1-213ENST00000496310 HIRIP3Q9BW71 556 aaPredicted RBP10.71□□□□□ -0.69
UBP1-213ENST00000496310 PIK3C2GO75747 1445 aa10.7□□□□□ -0.7
UBP1-213ENST00000496310 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
UBP1-213ENST00000496310 ARHGEF10O15013 1369 aa10.7□□□□□ -0.7
UBP1-213ENST00000496310 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms