RNA–Protein interactions for RNA: ENST00000496101.5

GCOM1-211, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-211ENST00000496101 ARHGEF28Q8N1W1 1705 aaKnown RBP23.71■■□□□ 1.39
GCOM1-211ENST00000496101 NPM1P06748 294 aaKnown RBP eCLIP23.7■■□□□ 1.38
GCOM1-211ENST00000496101 SIGLEC1Q9BZZ2 1709 aa23.69■■□□□ 1.38
GCOM1-211ENST00000496101 NEO1Q92859 1461 aa23.69■■□□□ 1.38
GCOM1-211ENST00000496101 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
GCOM1-211ENST00000496101 NSD2O96028 1365 aa23.67■■□□□ 1.38
GCOM1-211ENST00000496101 PDE3AQ14432 1141 aa23.67■■□□□ 1.38
GCOM1-211ENST00000496101 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
GCOM1-211ENST00000496101 FAM161AQ3B820 660 aa23.66■■□□□ 1.38
GCOM1-211ENST00000496101 NCBP3Q53F19 620 aaKnown RBP23.66■■□□□ 1.38
GCOM1-211ENST00000496101 MORC1Q86VD1 984 aa23.66■■□□□ 1.38
GCOM1-211ENST00000496101 VIRMAQ69YN4 1812 aaKnown RBP23.66■■□□□ 1.38
GCOM1-211ENST00000496101 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
GCOM1-211ENST00000496101 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
GCOM1-211ENST00000496101 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
GCOM1-211ENST00000496101 CFAP65Q6ZU64 1925 aaKnown RBP23.65■■□□□ 1.38
GCOM1-211ENST00000496101 CGNL1Q0VF96 1302 aa23.65■■□□□ 1.38
GCOM1-211ENST00000496101 WWC1Q8IX03 1113 aa23.65■■□□□ 1.38
GCOM1-211ENST00000496101 PPM1GO15355 546 aaPredicted RBP23.64■■□□□ 1.38
GCOM1-211ENST00000496101 DIP2CQ9Y2E4 1556 aa23.64■■□□□ 1.37
GCOM1-211ENST00000496101 SKAP1Q86WV1 359 aa23.64■■□□□ 1.37
GCOM1-211ENST00000496101 TULP4Q9NRJ4 1543 aa23.64■■□□□ 1.37
GCOM1-211ENST00000496101 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
GCOM1-211ENST00000496101 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
GCOM1-211ENST00000496101 BCAR3O75815 825 aa23.62■■□□□ 1.37
GCOM1-211ENST00000496101 DMRT2Q9Y5R5 561 aa23.62■■□□□ 1.37
GCOM1-211ENST00000496101 ZFYVE9O95405 1425 aa23.62■■□□□ 1.37
GCOM1-211ENST00000496101 GGT6Q6P531 493 aa23.61■■□□□ 1.37
GCOM1-211ENST00000496101 ANKRD36BQ8N2N9 1353 aa23.61■■□□□ 1.37
GCOM1-211ENST00000496101 C8orf34Q49A92 452 aa23.6■■□□□ 1.37
GCOM1-211ENST00000496101 SLC12A5Q9H2X9 1139 aa23.6■■□□□ 1.37
GCOM1-211ENST00000496101 EVC2Q86UK5 1308 aa23.59■■□□□ 1.37
GCOM1-211ENST00000496101 AAMPQ13685 434 aa23.59■■□□□ 1.37
GCOM1-211ENST00000496101 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
GCOM1-211ENST00000496101 VGFO15240 615 aaPredicted RBP23.59■■□□□ 1.37
GCOM1-211ENST00000496101 WDR63Q8IWG1 891 aa23.59■■□□□ 1.37
GCOM1-211ENST00000496101 ADGRB2O60241 1585 aa23.58■■□□□ 1.37
GCOM1-211ENST00000496101 CFAP53Q96M91 514 aa23.58■■□□□ 1.37
GCOM1-211ENST00000496101 RICTORQ6R327 1708 aa23.57■■□□□ 1.36
GCOM1-211ENST00000496101 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
GCOM1-211ENST00000496101 ANKRD26Q9UPS8 1709 aa23.53■■□□□ 1.36
GCOM1-211ENST00000496101 TCP11L2Q8N4U5 519 aa23.53■■□□□ 1.36
GCOM1-211ENST00000496101 CLUAP1Q96AJ1 413 aa23.53■■□□□ 1.36
GCOM1-211ENST00000496101 CLTCQ00610 1675 aaKnown RBP23.53■■□□□ 1.36
GCOM1-211ENST00000496101 MTHFSP49914 203 aa23.51■■□□□ 1.35
GCOM1-211ENST00000496101 LAS1LQ9Y4W2 734 aaKnown RBP23.51■■□□□ 1.35
GCOM1-211ENST00000496101 MAPK8IP3Q9UPT6 1336 aa23.51■■□□□ 1.35
GCOM1-211ENST00000496101 NEFMP07197 916 aa23.5■■□□□ 1.35
GCOM1-211ENST00000496101 ZMYM3Q14202 1370 aa23.5■■□□□ 1.35
GCOM1-211ENST00000496101 PREX1Q8TCU6 1659 aa23.5■■□□□ 1.35
GCOM1-211ENST00000496101 RARSP54136 660 aaKnown RBP23.5■■□□□ 1.35
GCOM1-211ENST00000496101 ABCC11Q96J66 1382 aa23.49■■□□□ 1.35
GCOM1-211ENST00000496101 CANXP27824 592 aaKnown RBP23.49■■□□□ 1.35
GCOM1-211ENST00000496101 TMEM131LA2VDJ0 1609 aa23.49■■□□□ 1.35
GCOM1-211ENST00000496101 MED14O60244 1454 aa23.48■■□□□ 1.35
GCOM1-211ENST00000496101 SLC52A1Q9NWF4 448 aa23.48■■□□□ 1.35
GCOM1-211ENST00000496101 IGHDP01880 384 aa23.47■■□□□ 1.35
GCOM1-211ENST00000496101 RGS3P49796 1198 aa23.47■■□□□ 1.35
GCOM1-211ENST00000496101 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
GCOM1-211ENST00000496101 MYO5BQ9ULV0 1848 aa23.46■■□□□ 1.35
GCOM1-211ENST00000496101 MYH16Q9H6N6 1097 aa23.45■■□□□ 1.35
GCOM1-211ENST00000496101 PMFBP1Q8TBY8 1022 aa23.45■■□□□ 1.34
GCOM1-211ENST00000496101 PANK1Q8TE04 598 aa23.45■■□□□ 1.34
GCOM1-211ENST00000496101 PTPRMP28827 1452 aa23.45■■□□□ 1.34
GCOM1-211ENST00000496101 COL3A1P02461 1466 aaPredicted RBP23.44■■□□□ 1.34
GCOM1-211ENST00000496101 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
GCOM1-211ENST00000496101 COG6Q9Y2V7 657 aa23.44■■□□□ 1.34
GCOM1-211ENST00000496101 ATAD2Q6PL18 1390 aa23.44■■□□□ 1.34
GCOM1-211ENST00000496101 CT47B1P0C2W7 299 aaPredicted RBP23.43■■□□□ 1.34
GCOM1-211ENST00000496101 RRP7AQ9Y3A4 280 aaKnown RBP23.43■■□□□ 1.34
GCOM1-211ENST00000496101 A0A1W2PP64 1363 aa23.42■■□□□ 1.34
GCOM1-211ENST00000496101 RAPGEF3O95398 923 aa23.42■■□□□ 1.34
GCOM1-211ENST00000496101 IDI1Q13907 227 aa23.42■■□□□ 1.34
GCOM1-211ENST00000496101 NEUROD2Q15784 382 aa23.42■■□□□ 1.34
GCOM1-211ENST00000496101 FRAT1Q92837 279 aaPredicted RBP23.39■■□□□ 1.34
GCOM1-211ENST00000496101 CABP2Q9NPB3 220 aa23.39■■□□□ 1.34
GCOM1-211ENST00000496101 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
GCOM1-211ENST00000496101 U2AF1Q01081 240 aaKnown RBP eCLIP23.38■■□□□ 1.33
GCOM1-211ENST00000496101 NLRP1Q9C000 1473 aa23.38■■□□□ 1.33
GCOM1-211ENST00000496101 YEATS2Q9ULM3 1422 aa23.37■■□□□ 1.33
GCOM1-211ENST00000496101 YTHDC2Q9H6S0 1430 aaKnown RBP23.36■■□□□ 1.33
GCOM1-211ENST00000496101 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
GCOM1-211ENST00000496101 CD163L1Q9NR16 1453 aa23.36■■□□□ 1.33
GCOM1-211ENST00000496101 NUTM2DQ5VT03 806 aaPredicted RBP23.35■■□□□ 1.33
GCOM1-211ENST00000496101 TERF2IPQ9NYB0 399 aa23.35■■□□□ 1.33
GCOM1-211ENST00000496101 CDC42BPGQ6DT37 1551 aa23.34■■□□□ 1.33
GCOM1-211ENST00000496101 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
GCOM1-211ENST00000496101 USP19O94966 1318 aa23.34■■□□□ 1.33
GCOM1-211ENST00000496101 IL16Q14005 1332 aa23.34■■□□□ 1.33
GCOM1-211ENST00000496101 RLBP1P12271 317 aa23.33■■□□□ 1.33
GCOM1-211ENST00000496101 NFKBIBQ15653 356 aa23.33■■□□□ 1.33
GCOM1-211ENST00000496101 PLEKHF1Q96S99 279 aa23.33■■□□□ 1.33
GCOM1-211ENST00000496101 ALKQ9UM73 1620 aa23.33■■□□□ 1.32
GCOM1-211ENST00000496101 SRPK2P78362 688 aaKnown RBP23.32■■□□□ 1.32
GCOM1-211ENST00000496101 RWDD1Q9H446 243 aaPredicted RBP23.32■■□□□ 1.32
GCOM1-211ENST00000496101 PCDHB15Q9Y5E8 787 aa23.32■■□□□ 1.32
GCOM1-211ENST00000496101 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
GCOM1-211ENST00000496101 DLC1Q96QB1 1528 aa23.31■■□□□ 1.32
GCOM1-211ENST00000496101 MVPQ14764 893 aaKnown RBP23.31■■□□□ 1.32
GCOM1-211ENST00000496101 ZKSCAN2Q63HK3 967 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms