RNA–Protein interactions for RNA: ENST00000495883.1

SNAP25-205, Transcript of synaptosome associated protein 25, human

TSL 2

Gene SNAP25, Length 2,256 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP25-205	ENST00000495883	MCM4	P33991	863 aa		13.76	□□□□□ -0.21
SNAP25-205	ENST00000495883	SPAG9	O60271	1321 aa	Known RBP	13.76	□□□□□ -0.21
SNAP25-205	ENST00000495883	ADGRF5	Q8IZF2	1346 aa		13.76	□□□□□ -0.21
SNAP25-205	ENST00000495883	IQSEC2	Q5JU85	1478 aa		13.75	□□□□□ -0.21
SNAP25-205	ENST00000495883	ABCC1	P33527	1531 aa		13.75	□□□□□ -0.21
SNAP25-205	ENST00000495883	MYOM2	P54296	1465 aa		13.74	□□□□□ -0.21
SNAP25-205	ENST00000495883	AFAP1	Q8N556	730 aa		13.74	□□□□□ -0.21
SNAP25-205	ENST00000495883	NEUROD2	Q15784	382 aa		13.74	□□□□□ -0.21
SNAP25-205	ENST00000495883	RRP7A	Q9Y3A4	280 aa	Known RBP	13.74	□□□□□ -0.21
SNAP25-205	ENST00000495883	MVP	Q14764	893 aa	Known RBP	13.73	□□□□□ -0.21
SNAP25-205	ENST00000495883	MORC1	Q86VD1	984 aa		13.73	□□□□□ -0.21
SNAP25-205	ENST00000495883	VWDE	Q8N2E2	1590 aa		13.73	□□□□□ -0.21
SNAP25-205	ENST00000495883	GOLGA6L3	A6NEY3	463 aa		13.72	□□□□□ -0.21
SNAP25-205	ENST00000495883	DEPDC5	O75140	1603 aa		13.72	□□□□□ -0.21
SNAP25-205	ENST00000495883	SHPRH	Q149N8	1683 aa		13.72	□□□□□ -0.21
SNAP25-205	ENST00000495883	CHMP5	Q9NZZ3	219 aa		13.72	□□□□□ -0.21
SNAP25-205	ENST00000495883	MAP3K4	Q9Y6R4	1608 aa		13.72	□□□□□ -0.21
SNAP25-205	ENST00000495883	TET3	O43151	1660 aa		13.71	□□□□□ -0.21
SNAP25-205	ENST00000495883	NRXN1	Q9ULB1	1477 aa		13.71	□□□□□ -0.21
SNAP25-205	ENST00000495883	CT47B1	P0C2W7	299 aa	Predicted RBP	13.71	□□□□□ -0.21
SNAP25-205	ENST00000495883	C22orf23	Q9BZE7	217 aa		13.71	□□□□□ -0.21
SNAP25-205	ENST00000495883	BCL2L13	Q9BXK5	485 aa		13.7	□□□□□ -0.22
SNAP25-205	ENST00000495883	SLC12A5	Q9H2X9	1139 aa		13.7	□□□□□ -0.22
SNAP25-205	ENST00000495883	MYH16	Q9H6N6	1097 aa		13.7	□□□□□ -0.22
SNAP25-205	ENST00000495883	SHROOM2	Q13796	1616 aa		13.7	□□□□□ -0.22
SNAP25-205	ENST00000495883	NSD3	Q9BZ95	1437 aa		13.7	□□□□□ -0.22
SNAP25-205	ENST00000495883	MTHFS	P49914	203 aa		13.7	□□□□□ -0.22
SNAP25-205	ENST00000495883	HDAC1	Q13547	482 aa	Predicted RBP	13.7	□□□□□ -0.22
SNAP25-205	ENST00000495883	CLCN1	P35523	988 aa		13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	ZKSCAN2	Q63HK3	967 aa		13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	ZNF692	Q9BU19	519 aa	Predicted RBP	13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	ZNF518A	Q6AHZ1	1483 aa		13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	MYO3A	Q8NEV4	1616 aa		13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	ZFYVE16	Q7Z3T8	1539 aa		13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	TRAK2	O60296	914 aa		13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	DZIP1L	Q8IYY4	767 aa	Known RBP	13.69	□□□□□ -0.22
SNAP25-205	ENST00000495883	ABCA6	Q8N139	1617 aa		13.68	□□□□□ -0.22
SNAP25-205	ENST00000495883	DDIT3	P35638	169 aa		13.68	□□□□□ -0.22
SNAP25-205	ENST00000495883	TNNT2	P45379	298 aa	Predicted RBP	13.67	□□□□□ -0.22
SNAP25-205	ENST00000495883	PANK2	Q9BZ23	570 aa		13.67	□□□□□ -0.22
SNAP25-205	ENST00000495883	KIF3B	O15066	747 aa		13.66	□□□□□ -0.22
SNAP25-205	ENST00000495883	MRE11	P49959	708 aa		13.66	□□□□□ -0.22
SNAP25-205	ENST00000495883	SMC5	Q8IY18	1101 aa		13.66	□□□□□ -0.22
SNAP25-205	ENST00000495883	SPRYD3	Q8NCJ5	442 aa		13.66	□□□□□ -0.22
SNAP25-205	ENST00000495883	ARAP3	Q8WWN8	1544 aa		13.66	□□□□□ -0.22
SNAP25-205	ENST00000495883	CFAP53	Q96M91	514 aa		13.66	□□□□□ -0.22
SNAP25-205	ENST00000495883	PUS7	Q96PZ0	661 aa	Known RBP	13.66	□□□□□ -0.22
SNAP25-205	ENST00000495883	C14orf93	Q9H972	538 aa	Known RBP	13.65	□□□□□ -0.22
SNAP25-205	ENST00000495883	ISY1	Q9ULR0	285 aa	Known RBP	13.65	□□□□□ -0.22
SNAP25-205	ENST00000495883	GZF1	Q9H116	711 aa	Predicted RBP	13.65	□□□□□ -0.22
SNAP25-205	ENST00000495883	ERCC6L2	Q5T890	1561 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	SETBP1	Q9Y6X0	1596 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	UHRF1BP1L	A0JNW5	1464 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	TRIM27	P14373	513 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	RBM25	P49756	843 aa	Known RBP	13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	MFAP1	P55081	439 aa	Known RBP	13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	SNX21	Q969T3	373 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	NCOA3	Q9Y6Q9	1424 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	UGGT1	Q9NYU2	1555 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	FTSJ3	Q8IY81	847 aa	Known RBP	13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	DDX19B	Q9UMR2	479 aa		13.64	□□□□□ -0.23
SNAP25-205	ENST00000495883	ADGRL1	O94910	1474 aa		13.63	□□□□□ -0.23
SNAP25-205	ENST00000495883	DDX11L8	A8MPP1	907 aa		13.62	□□□□□ -0.23
SNAP25-205	ENST00000495883	TRAK1	Q9UPV9	953 aa		13.62	□□□□□ -0.23
SNAP25-205	ENST00000495883	ATF7IP	Q6VMQ6	1270 aa		13.62	□□□□□ -0.23
SNAP25-205	ENST00000495883	PLEKHF1	Q96S99	279 aa		13.62	□□□□□ -0.23
SNAP25-205	ENST00000495883	ZBTB40	Q9NUA8	1239 aa		13.62	□□□□□ -0.23
SNAP25-205	ENST00000495883	USP32	Q8NFA0	1604 aa		13.62	□□□□□ -0.23
SNAP25-205	ENST00000495883	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	SSH1	Q8WYL5	1049 aa		13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	PNN	Q9H307	717 aa	Known RBP	13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	IFT172	Q9UG01	1749 aa		13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	EXOSC9	Q06265	439 aa	Known RBP	13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	HSCB	Q8IWL3	235 aa		13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	GRPEL1	Q9HAV7	217 aa		13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	NSD2	O96028	1365 aa		13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	MROH1	Q8NDA8	1641 aa		13.61	□□□□□ -0.23
SNAP25-205	ENST00000495883	NOS1	P29475	1434 aa		13.6	□□□□□ -0.23
SNAP25-205	ENST00000495883	ATP7A	Q04656	1500 aa		13.6	□□□□□ -0.23
SNAP25-205	ENST00000495883	TSR2	Q969E8	191 aa	Known RBP	13.6	□□□□□ -0.23
SNAP25-205	ENST00000495883	SMC4	Q9NTJ3	1288 aa		13.6	□□□□□ -0.23
SNAP25-205	ENST00000495883	TRIM35	Q9UPQ4	493 aa		13.6	□□□□□ -0.23
SNAP25-205	ENST00000495883	ADGRB2	O60241	1585 aa		13.6	□□□□□ -0.23
SNAP25-205	ENST00000495883	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.6	□□□□□ -0.23
SNAP25-205	ENST00000495883	FANCA	O15360	1455 aa		13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	TMPO	P42166	694 aa	Known RBP	13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	NUCB1	Q02818	461 aa		13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	IL16	Q14005	1332 aa		13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	ADGRB1	O14514	1584 aa		13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	INO80	Q9ULG1	1556 aa	Predicted RBP	13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	ARX	Q96QS3	562 aa		13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	NOB1	Q9ULX3	412 aa	Known RBP	13.59	□□□□□ -0.23
SNAP25-205	ENST00000495883	KIF1B	O60333	1816 aa		13.58	□□□□□ -0.24
SNAP25-205	ENST00000495883	ITPRIP	Q8IWB1	547 aa		13.58	□□□□□ -0.24
SNAP25-205	ENST00000495883	ANKRD36B	Q8N2N9	1353 aa		13.58	□□□□□ -0.24
SNAP25-205	ENST00000495883	CD109	Q6YHK3	1445 aa		13.58	□□□□□ -0.24
SNAP25-205	ENST00000495883	EFCAB6	Q5THR3	1501 aa		13.57	□□□□□ -0.24
SNAP25-205	ENST00000495883	TMEM57	Q8N5G2	664 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms