RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 PCDHGC3Q9UN70 934 aa5.8□□□□□ -1.48
COPS3-211ENST00000495640 CCDC9Q9Y3X0 531 aaKnown RBP5.8□□□□□ -1.48
COPS3-211ENST00000495640 SMAPO00193 183 aa5.79□□□□□ -1.48
COPS3-211ENST00000495640 PPP1R15AO75807 674 aaPredicted RBP5.79□□□□□ -1.48
COPS3-211ENST00000495640 GCGRP47871 477 aa5.79□□□□□ -1.48
COPS3-211ENST00000495640 KCTD17Q8N5Z5 321 aa5.79□□□□□ -1.48
COPS3-211ENST00000495640 SLC4A5Q9BY07 1137 aa5.79□□□□□ -1.48
COPS3-211ENST00000495640 TRIM34Q9BYJ4 488 aa5.79□□□□□ -1.48
COPS3-211ENST00000495640 HMX1Q9NP08 348 aaPredicted RBP5.79□□□□□ -1.48
COPS3-211ENST00000495640 SLC10A3P09131 477 aa5.78□□□□□ -1.48
COPS3-211ENST00000495640 RANGAP1P46060 587 aaPredicted RBP5.78□□□□□ -1.48
COPS3-211ENST00000495640 USP46P62068 366 aa5.78□□□□□ -1.48
COPS3-211ENST00000495640 SRPK2P78362 688 aaKnown RBP5.78□□□□□ -1.48
COPS3-211ENST00000495640 PACS2Q86VP3 889 aa5.78□□□□□ -1.48
COPS3-211ENST00000495640 ZBTB3Q9H5J0 574 aa5.78□□□□□ -1.48
COPS3-211ENST00000495640 NUTM2BA6NNL0 878 aaPredicted RBP5.77□□□□□ -1.49
COPS3-211ENST00000495640 NUTM2EB1AL46 878 aaPredicted RBP5.77□□□□□ -1.49
COPS3-211ENST00000495640 CTDSPL2Q05D32 466 aa5.77□□□□□ -1.49
COPS3-211ENST00000495640 NUTM2DQ5VT03 806 aaPredicted RBP5.77□□□□□ -1.49
COPS3-211ENST00000495640 THSD4Q6ZMP0 1018 aa5.77□□□□□ -1.49
COPS3-211ENST00000495640 NUTM2AQ8IVF1 878 aaPredicted RBP5.77□□□□□ -1.49
COPS3-211ENST00000495640 RDH13Q8NBN7 331 aa5.77□□□□□ -1.49
COPS3-211ENST00000495640 HLA-CQ95604 372 aa5.77□□□□□ -1.49
COPS3-211ENST00000495640 ZBED2Q9BTP6 218 aa5.77□□□□□ -1.49
COPS3-211ENST00000495640 NDUFB9Q9Y6M9 179 aa5.77□□□□□ -1.49
COPS3-211ENST00000495640 FDX1P10109 184 aa5.76□□□□□ -1.49
COPS3-211ENST00000495640 GUCA2AQ02747 115 aa5.76□□□□□ -1.49
COPS3-211ENST00000495640 WWC1Q8IX03 1113 aa5.76□□□□□ -1.49
COPS3-211ENST00000495640 PRM3Q9NNZ6 103 aa5.76□□□□□ -1.49
COPS3-211ENST00000495640 A0A0G2JS52 829 aa5.75□□□□□ -1.49
COPS3-211ENST00000495640 PTPN5P54829 565 aa5.75□□□□□ -1.49
COPS3-211ENST00000495640 CFAP70Q5T0N1 1121 aa5.75□□□□□ -1.49
COPS3-211ENST00000495640 CFAP99D6REC4 459 aa5.74□□□□□ -1.49
COPS3-211ENST00000495640 RGS20O76081 388 aa5.74□□□□□ -1.49
COPS3-211ENST00000495640 SWT1Q5T5J6 900 aaKnown RBP5.74□□□□□ -1.49
COPS3-211ENST00000495640 HDGFL1Q5TGJ6 251 aa5.74□□□□□ -1.49
COPS3-211ENST00000495640 AEBP1Q8IUX7 1158 aa5.74□□□□□ -1.49
COPS3-211ENST00000495640 LRRN4Q8WUT4 740 aa5.74□□□□□ -1.49
COPS3-211ENST00000495640 PBXIP1Q96AQ6 731 aa5.74□□□□□ -1.49
COPS3-211ENST00000495640 KIAA1468Q9P260 1216 aa5.74□□□□□ -1.49
COPS3-211ENST00000495640 MTMR2Q13614 643 aa5.73□□□□□ -1.49
COPS3-211ENST00000495640 WASHC4Q2M389 1173 aa5.73□□□□□ -1.49
COPS3-211ENST00000495640 EPS8L1Q8TE68 723 aa5.73□□□□□ -1.49
COPS3-211ENST00000495640 ALG2Q9H553 416 aa5.73□□□□□ -1.49
COPS3-211ENST00000495640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.72□□□□□ -1.49
COPS3-211ENST00000495640 RGS22Q8NE09 1264 aa5.72□□□□□ -1.49
COPS3-211ENST00000495640 UCN2Q96RP3 112 aa5.72□□□□□ -1.49
COPS3-211ENST00000495640 VAC14Q08AM6 782 aa5.71□□□□□ -1.5
COPS3-211ENST00000495640 FUT2Q10981 343 aa5.71□□□□□ -1.5
COPS3-211ENST00000495640 HELBQ8NG08 1087 aaPredicted RBP5.71□□□□□ -1.5
COPS3-211ENST00000495640 PPP1R12CQ9BZL4 782 aa5.71□□□□□ -1.5
COPS3-211ENST00000495640 RABGEF1Q9UJ41 708 aa5.71□□□□□ -1.5
COPS3-211ENST00000495640 RSPH4AQ5TD94 716 aa5.7□□□□□ -1.5
COPS3-211ENST00000495640 KCNH8Q96L42 1107 aa5.7□□□□□ -1.5
COPS3-211ENST00000495640 STAC3Q96MF2 364 aa5.7□□□□□ -1.5
COPS3-211ENST00000495640 SEPT9Q9UHD8 586 aaPredicted RBP5.7□□□□□ -1.5
COPS3-211ENST00000495640 USTQ9Y2C2 406 aa5.7□□□□□ -1.5
COPS3-211ENST00000495640 ACIN1Q9UKV3 1341 aaKnown RBP5.7□□□□□ -1.5
COPS3-211ENST00000495640 PALM3A6NDB9 673 aaPredicted RBP5.69□□□□□ -1.5
COPS3-211ENST00000495640 PRR7Q8TB68 274 aa5.69□□□□□ -1.5
COPS3-211ENST00000495640 WNT2BQ93097 391 aa5.69□□□□□ -1.5
COPS3-211ENST00000495640 GZF1Q9H116 711 aaPredicted RBP5.69□□□□□ -1.5
COPS3-211ENST00000495640 PER1O15534 1290 aaPredicted RBP5.68□□□□□ -1.5
COPS3-211ENST00000495640 BRD1O95696 1058 aa5.68□□□□□ -1.5
COPS3-211ENST00000495640 RFX1P22670 979 aa5.68□□□□□ -1.5
COPS3-211ENST00000495640 PDE4CQ08493 712 aa5.68□□□□□ -1.5
COPS3-211ENST00000495640 FAM98CQ17RN3 349 aaKnown RBP5.68□□□□□ -1.5
COPS3-211ENST00000495640 SYMPKQ92797 1274 aaKnown RBP5.68□□□□□ -1.5
COPS3-211ENST00000495640 C6orf229H3BNL8 230 aa5.67□□□□□ -1.5
COPS3-211ENST00000495640 ITGBL1O95965 494 aaPredicted RBP5.67□□□□□ -1.5
COPS3-211ENST00000495640 CFHP08603 1231 aa5.67□□□□□ -1.5
COPS3-211ENST00000495640 NR6A1Q15406 480 aa5.67□□□□□ -1.5
COPS3-211ENST00000495640 TMCO4Q5TGY1 634 aa5.67□□□□□ -1.5
COPS3-211ENST00000495640 MRPL50Q8N5N7 158 aaKnown RBP5.67□□□□□ -1.5
COPS3-211ENST00000495640 IRX2Q9BZI1 471 aaPredicted RBP5.67□□□□□ -1.5
COPS3-211ENST00000495640 CARNS1A5YM72 827 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 TMEM88BA6NKF7 163 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 SOX11P35716 441 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 ATP6V1AP38606 617 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
COPS3-211ENST00000495640 KCNA1Q09470 495 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 SAMD7Q7Z3H4 446 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 SLF2Q8IX21 1173 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 TSC1Q92574 1164 aa5.66□□□□□ -1.5
COPS3-211ENST00000495640 TFIP11Q9UBB9 837 aaKnown RBP5.66□□□□□ -1.5
COPS3-211ENST00000495640 MAFBQ9Y5Q3 323 aaPredicted RBP5.66□□□□□ -1.5
COPS3-211ENST00000495640 ATG7O95352 703 aa5.65□□□□□ -1.5
COPS3-211ENST00000495640 LMOD1P29536 600 aaPredicted RBP5.65□□□□□ -1.5
COPS3-211ENST00000495640 GRIPAP1Q4V328 841 aa5.65□□□□□ -1.5
COPS3-211ENST00000495640 MORN1Q5T089 497 aa5.65□□□□□ -1.5
COPS3-211ENST00000495640 DESI1Q6ICB0 168 aa5.65□□□□□ -1.5
COPS3-211ENST00000495640 RETREG3Q86VR2 466 aa5.65□□□□□ -1.5
COPS3-211ENST00000495640 NBPF3Q9H094 633 aa5.65□□□□□ -1.5
COPS3-211ENST00000495640 MTMR7Q9Y216 660 aa5.65□□□□□ -1.5
COPS3-211ENST00000495640 PATL2C9JE40 543 aaKnown RBP5.64□□□□□ -1.51
COPS3-211ENST00000495640 CSB-PGBD3P0DP91 1061 aa5.64□□□□□ -1.51
COPS3-211ENST00000495640 TBC1D9Q6ZT07 1266 aa5.64□□□□□ -1.51
COPS3-211ENST00000495640 LAPTM4BQ86VI4 370 aa5.64□□□□□ -1.51
COPS3-211ENST00000495640 GOLGA8CPA6NN73 597 aa5.63□□□□□ -1.51
COPS3-211ENST00000495640 LYPD8Q6UX82 237 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms