RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 NUTM2EB1AL46 878 aaPredicted RBP20.64■□□□□ 0.89
PTPRE-211ENST00000495530 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
PTPRE-211ENST00000495530 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
PTPRE-211ENST00000495530 GPRASP1Q5JY77 1395 aa20.63■□□□□ 0.89
PTPRE-211ENST00000495530 CHD2O14647 1828 aaKnown RBP20.63■□□□□ 0.89
PTPRE-211ENST00000495530 EIF4G2P78344 907 aaKnown RBP eCLIP20.63■□□□□ 0.89
PTPRE-211ENST00000495530 TRPM1Q7Z4N2 1603 aa20.63■□□□□ 0.89
PTPRE-211ENST00000495530 ATAD2Q6PL18 1390 aa20.62■□□□□ 0.89
PTPRE-211ENST00000495530 RBM6P78332 1123 aaKnown RBP20.62■□□□□ 0.89
PTPRE-211ENST00000495530 LAMC1P11047 1609 aa20.61■□□□□ 0.89
PTPRE-211ENST00000495530 DIP2AQ14689 1571 aa20.6■□□□□ 0.89
PTPRE-211ENST00000495530 TMEM132EQ6IEE7 984 aa20.59■□□□□ 0.89
PTPRE-211ENST00000495530 EP400Q96L91 3159 aa20.58■□□□□ 0.89
PTPRE-211ENST00000495530 NCOA3Q9Y6Q9 1424 aa20.58■□□□□ 0.88
PTPRE-211ENST00000495530 ADAMTS13Q76LX8 1427 aa20.57■□□□□ 0.88
PTPRE-211ENST00000495530 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
PTPRE-211ENST00000495530 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.56■□□□□ 0.88
PTPRE-211ENST00000495530 EIF3AQ14152 1382 aaKnown RBP20.55■□□□□ 0.88
PTPRE-211ENST00000495530 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
PTPRE-211ENST00000495530 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
PTPRE-211ENST00000495530 NGLY1Q96IV0 654 aa20.54■□□□□ 0.88
PTPRE-211ENST00000495530 USP47Q96K76 1375 aa20.54■□□□□ 0.88
PTPRE-211ENST00000495530 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
PTPRE-211ENST00000495530 CADPS2Q86UW7 1296 aa20.53■□□□□ 0.88
PTPRE-211ENST00000495530 TRAK1Q9UPV9 953 aa20.53■□□□□ 0.88
PTPRE-211ENST00000495530 METP08581 1390 aa20.53■□□□□ 0.88
PTPRE-211ENST00000495530 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
PTPRE-211ENST00000495530 ADGRB1O14514 1584 aa20.52■□□□□ 0.88
PTPRE-211ENST00000495530 LRPPRCP42704 1394 aaKnown RBP20.52■□□□□ 0.88
PTPRE-211ENST00000495530 SIRT1Q96EB6 747 aa20.52■□□□□ 0.88
PTPRE-211ENST00000495530 STK26Q9P289 416 aa20.52■□□□□ 0.88
PTPRE-211ENST00000495530 YTHDC2Q9H6S0 1430 aaKnown RBP20.52■□□□□ 0.87
PTPRE-211ENST00000495530 ABCC11Q96J66 1382 aa20.51■□□□□ 0.87
PTPRE-211ENST00000495530 C14orf37Q86TY3 774 aa20.5■□□□□ 0.87
PTPRE-211ENST00000495530 ST20-MTHFSA0A0A6YYL1 179 aa20.49■□□□□ 0.87
PTPRE-211ENST00000495530 ATF3P18847 181 aa20.49■□□□□ 0.87
PTPRE-211ENST00000495530 C8orf37Q96NL8 207 aa20.49■□□□□ 0.87
PTPRE-211ENST00000495530 AMOTL2Q9Y2J4 779 aa20.49■□□□□ 0.87
PTPRE-211ENST00000495530 LRP5O75197 1615 aa20.49■□□□□ 0.87
PTPRE-211ENST00000495530 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
PTPRE-211ENST00000495530 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
PTPRE-211ENST00000495530 C19orf44Q9H6X5 657 aa20.47■□□□□ 0.87
PTPRE-211ENST00000495530 POGKQ9P215 609 aa20.47■□□□□ 0.87
PTPRE-211ENST00000495530 CENPJQ9HC77 1338 aaPredicted RBP20.46■□□□□ 0.87
PTPRE-211ENST00000495530 NHSL1Q5SYE7 1610 aa20.45■□□□□ 0.87
PTPRE-211ENST00000495530 ASXL1Q8IXJ9 1541 aa20.45■□□□□ 0.86
PTPRE-211ENST00000495530 BRINP3Q76B58 766 aa20.45■□□□□ 0.86
PTPRE-211ENST00000495530 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
PTPRE-211ENST00000495530 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
PTPRE-211ENST00000495530 TECPR2O15040 1411 aa20.43■□□□□ 0.86
PTPRE-211ENST00000495530 DLC1Q96QB1 1528 aa20.43■□□□□ 0.86
PTPRE-211ENST00000495530 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
PTPRE-211ENST00000495530 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
PTPRE-211ENST00000495530 TMF1P82094 1093 aa20.4■□□□□ 0.86
PTPRE-211ENST00000495530 CDCA8Q53HL2 280 aa20.39■□□□□ 0.85
PTPRE-211ENST00000495530 TESK2Q96S53 571 aa20.39■□□□□ 0.85
PTPRE-211ENST00000495530 SBNO2Q9Y2G9 1366 aa20.38■□□□□ 0.85
PTPRE-211ENST00000495530 WAPLQ7Z5K2 1190 aa20.38■□□□□ 0.85
PTPRE-211ENST00000495530 PTCH1Q13635 1447 aa20.37■□□□□ 0.85
PTPRE-211ENST00000495530 DCCP43146 1447 aa20.36■□□□□ 0.85
PTPRE-211ENST00000495530 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
PTPRE-211ENST00000495530 ROBO2Q9HCK4 1378 aa20.36■□□□□ 0.85
PTPRE-211ENST00000495530 SAFB2Q14151 953 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPRE-211ENST00000495530 TRPC5Q9UL62 973 aaPredicted RBP20.36■□□□□ 0.85
PTPRE-211ENST00000495530 KNDC1Q76NI1 1749 aa20.36■□□□□ 0.85
PTPRE-211ENST00000495530 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
PTPRE-211ENST00000495530 ARHGEF28Q8N1W1 1705 aaKnown RBP20.34■□□□□ 0.85
PTPRE-211ENST00000495530 USP21Q9UK80 565 aa20.34■□□□□ 0.85
PTPRE-211ENST00000495530 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
PTPRE-211ENST00000495530 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
PTPRE-211ENST00000495530 XRN1Q8IZH2 1706 aaKnown RBP20.32■□□□□ 0.84
PTPRE-211ENST00000495530 MINK1Q8N4C8 1332 aaPredicted RBP20.31■□□□□ 0.84
PTPRE-211ENST00000495530 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
PTPRE-211ENST00000495530 ATRNO75882 1429 aa20.28■□□□□ 0.84
PTPRE-211ENST00000495530 BLMP54132 1417 aaPredicted RBP20.28■□□□□ 0.84
PTPRE-211ENST00000495530 MST1RQ04912 1400 aa20.28■□□□□ 0.84
PTPRE-211ENST00000495530 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
PTPRE-211ENST00000495530 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
PTPRE-211ENST00000495530 WASLO00401 505 aaPredicted RBP20.27■□□□□ 0.84
PTPRE-211ENST00000495530 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.83
PTPRE-211ENST00000495530 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.83
PTPRE-211ENST00000495530 CCDC7Q96M83 1385 aa20.26■□□□□ 0.83
PTPRE-211ENST00000495530 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
PTPRE-211ENST00000495530 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
PTPRE-211ENST00000495530 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
PTPRE-211ENST00000495530 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
PTPRE-211ENST00000495530 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
PTPRE-211ENST00000495530 ADGRL3Q9HAR2 1447 aa20.2■□□□□ 0.82
PTPRE-211ENST00000495530 MARF1Q9Y4F3 1742 aaKnown RBP20.2■□□□□ 0.82
PTPRE-211ENST00000495530 DDX17Q92841 729 aaKnown RBP20.2■□□□□ 0.82
PTPRE-211ENST00000495530 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
PTPRE-211ENST00000495530 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
PTPRE-211ENST00000495530 DEFB132Q7Z7B7 95 aa20.18■□□□□ 0.82
PTPRE-211ENST00000495530 TULP4Q9NRJ4 1543 aa20.17■□□□□ 0.82
PTPRE-211ENST00000495530 ADGRB2O60241 1585 aa20.17■□□□□ 0.82
PTPRE-211ENST00000495530 COL22A1Q8NFW1 1626 aaPredicted RBP20.17■□□□□ 0.82
PTPRE-211ENST00000495530 NUDT16Q96DE0 195 aaKnown RBP20.17■□□□□ 0.82
PTPRE-211ENST00000495530 CCDC61Q9Y6R9 512 aa20.17■□□□□ 0.82
PTPRE-211ENST00000495530 BRWD3Q6RI45 1802 aa20.17■□□□□ 0.82
PTPRE-211ENST00000495530 NINLQ9Y2I6 1382 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms