RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, human

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-213	ENST00000495426	TMEM2	Q9UHN6	1383 aa		11.41	□□□□□ -0.58
BBS9-213	ENST00000495426	NKTR	P30414	1462 aa	Known RBP	11.41	□□□□□ -0.58
BBS9-213	ENST00000495426	TMEM94	Q12767	1356 aa		11.41	□□□□□ -0.58
BBS9-213	ENST00000495426	TET3	O43151	1660 aa		11.4	□□□□□ -0.58
BBS9-213	ENST00000495426	GCC2	Q8IWJ2	1684 aa		11.4	□□□□□ -0.58
BBS9-213	ENST00000495426	CHD2	O14647	1828 aa	Known RBP	11.4	□□□□□ -0.58
BBS9-213	ENST00000495426	HAX1	O00165	279 aa		11.4	□□□□□ -0.58
BBS9-213	ENST00000495426	EID1	Q9Y6B2	187 aa		11.4	□□□□□ -0.58
BBS9-213	ENST00000495426	LMTK2	Q8IWU2	1503 aa		11.4	□□□□□ -0.59
BBS9-213	ENST00000495426	CABP2	Q9NPB3	220 aa		11.38	□□□□□ -0.59
BBS9-213	ENST00000495426	COL16A1	Q07092	1604 aa	Predicted RBP	11.38	□□□□□ -0.59
BBS9-213	ENST00000495426	ABCC5	O15440	1437 aa		11.37	□□□□□ -0.59
BBS9-213	ENST00000495426	POTEA	Q6S8J7	498 aa		11.37	□□□□□ -0.59
BBS9-213	ENST00000495426	KANK1	Q14678	1352 aa		11.37	□□□□□ -0.59
BBS9-213	ENST00000495426	DAPK1	P53355	1430 aa		11.36	□□□□□ -0.59
BBS9-213	ENST00000495426	MS4A3	Q96HJ5	214 aa		11.36	□□□□□ -0.59
BBS9-213	ENST00000495426	KANK4	Q5T7N3	995 aa	Predicted RBP	11.35	□□□□□ -0.59
BBS9-213	ENST00000495426	NOS1	P29475	1434 aa		11.35	□□□□□ -0.59
BBS9-213	ENST00000495426	SHPRH	Q149N8	1683 aa		11.34	□□□□□ -0.59
BBS9-213	ENST00000495426	MSH6	P52701	1360 aa		11.34	□□□□□ -0.59
BBS9-213	ENST00000495426	KCNA6	P17658	529 aa		11.34	□□□□□ -0.59
BBS9-213	ENST00000495426	EFCAB3	Q8N7B9	438 aa		11.34	□□□□□ -0.59
BBS9-213	ENST00000495426	RRP7BP	Q9NSQ0	103 aa		11.34	□□□□□ -0.59
BBS9-213	ENST00000495426	PROSER2	Q86WR7	435 aa	Predicted RBP	11.33	□□□□□ -0.6
BBS9-213	ENST00000495426	RBM33	Q96EV2	1170 aa	Known RBP	11.33	□□□□□ -0.6
BBS9-213	ENST00000495426	SLC26A8	Q96RN1	970 aa		11.33	□□□□□ -0.6
BBS9-213	ENST00000495426	TMEM106C	Q9BVX2	250 aa		11.33	□□□□□ -0.6
BBS9-213	ENST00000495426	MFRP	Q9BY79	579 aa		11.33	□□□□□ -0.6
BBS9-213	ENST00000495426	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.32	□□□□□ -0.6
BBS9-213	ENST00000495426	IDI1	Q13907	227 aa		11.32	□□□□□ -0.6
BBS9-213	ENST00000495426	FGD6	Q6ZV73	1430 aa		11.32	□□□□□ -0.6
BBS9-213	ENST00000495426	TMEM131L	A2VDJ0	1609 aa		11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	LRP6	O75581	1613 aa		11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	JCAD	Q9P266	1359 aa		11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	SOX12	O15370	315 aa		11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	GOLGA2	Q08379	1002 aa		11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	TRPC6	Q9Y210	931 aa		11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	ZFYVE9	O95405	1425 aa		11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.31	□□□□□ -0.6
BBS9-213	ENST00000495426	ANKRD30A	Q9BXX3	1397 aa		11.3	□□□□□ -0.6
BBS9-213	ENST00000495426	DIP2A	Q14689	1571 aa		11.3	□□□□□ -0.6
BBS9-213	ENST00000495426	RPRD2	Q5VT52	1461 aa	Known RBP	11.3	□□□□□ -0.6
BBS9-213	ENST00000495426	NLRP6	P59044	892 aa		11.29	□□□□□ -0.6
BBS9-213	ENST00000495426	EVX2	Q03828	476 aa		11.29	□□□□□ -0.6
BBS9-213	ENST00000495426	ADGRL2	O95490	1459 aa		11.29	□□□□□ -0.6
BBS9-213	ENST00000495426	PLEKHG1	Q9ULL1	1385 aa		11.28	□□□□□ -0.6
BBS9-213	ENST00000495426		E9PCH4	1651 aa		11.28	□□□□□ -0.6
BBS9-213	ENST00000495426	BCAN	Q96GW7	911 aa		11.28	□□□□□ -0.6
BBS9-213	ENST00000495426	UNC13B	O14795	1591 aa		11.28	□□□□□ -0.6
BBS9-213	ENST00000495426	RIMS2	Q9UQ26	1411 aa		11.27	□□□□□ -0.6
BBS9-213	ENST00000495426	CHIC2	Q9UKJ5	165 aa		11.27	□□□□□ -0.61
BBS9-213	ENST00000495426	PHF8	Q9UPP1	1060 aa		11.27	□□□□□ -0.61
BBS9-213	ENST00000495426	SLAIN2	Q9P270	581 aa		11.26	□□□□□ -0.61
BBS9-213	ENST00000495426	NHSL1	Q5SYE7	1610 aa		11.25	□□□□□ -0.61
BBS9-213	ENST00000495426	GALR2	O43603	387 aa	Predicted RBP	11.25	□□□□□ -0.61
BBS9-213	ENST00000495426	TIE1	P35590	1138 aa		11.25	□□□□□ -0.61
BBS9-213	ENST00000495426	CLCN6	P51797	869 aa		11.25	□□□□□ -0.61
BBS9-213	ENST00000495426	POTEH	Q6S545	545 aa		11.25	□□□□□ -0.61
BBS9-213	ENST00000495426	SLC52A1	Q9NWF4	448 aa		11.25	□□□□□ -0.61
BBS9-213	ENST00000495426	TRPM2	O94759	1503 aa		11.25	□□□□□ -0.61
BBS9-213	ENST00000495426	PPP1R15A	O75807	674 aa	Predicted RBP	11.24	□□□□□ -0.61
BBS9-213	ENST00000495426	MKRN3	Q13064	507 aa	Known RBP	11.24	□□□□□ -0.61
BBS9-213	ENST00000495426	FBXO22	Q8NEZ5	403 aa		11.24	□□□□□ -0.61
BBS9-213	ENST00000495426	SPATA31A6	Q5VVP1	1343 aa		11.24	□□□□□ -0.61
BBS9-213	ENST00000495426	NCOA3	Q9Y6Q9	1424 aa		11.24	□□□□□ -0.61
BBS9-213	ENST00000495426	XRN1	Q8IZH2	1706 aa	Known RBP	11.23	□□□□□ -0.61
BBS9-213	ENST00000495426	MEX3C	Q5U5Q3	659 aa	Known RBP	11.23	□□□□□ -0.61
BBS9-213	ENST00000495426	ADAMTS13	Q76LX8	1427 aa		11.23	□□□□□ -0.61
BBS9-213	ENST00000495426	ANKRD50	Q9ULJ7	1429 aa		11.23	□□□□□ -0.61
BBS9-213	ENST00000495426	IQGAP3	Q86VI3	1631 aa		11.23	□□□□□ -0.61
BBS9-213	ENST00000495426	LOC105371045	A0A1W2PR82	267 aa		11.22	□□□□□ -0.61
BBS9-213	ENST00000495426	TTLL13P	A6NNM8	815 aa		11.22	□□□□□ -0.61
BBS9-213	ENST00000495426	C14orf37	Q86TY3	774 aa		11.22	□□□□□ -0.61
BBS9-213	ENST00000495426	TRIM52	Q96A61	297 aa		11.22	□□□□□ -0.61
BBS9-213	ENST00000495426	NRXN3	Q9Y4C0	1643 aa		11.22	□□□□□ -0.61
BBS9-213	ENST00000495426	ASXL1	Q8IXJ9	1541 aa		11.21	□□□□□ -0.61
BBS9-213	ENST00000495426	PPP1R37	O75864	691 aa		11.21	□□□□□ -0.61
BBS9-213	ENST00000495426	ZNF772	Q68DY9	489 aa	Predicted RBP	11.21	□□□□□ -0.61
BBS9-213	ENST00000495426	SPHKAP	Q2M3C7	1700 aa		11.21	□□□□□ -0.62
BBS9-213	ENST00000495426	NALCN	Q8IZF0	1738 aa		11.21	□□□□□ -0.62
BBS9-213	ENST00000495426	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.2	□□□□□ -0.62
BBS9-213	ENST00000495426	PIK3R4	Q99570	1358 aa		11.2	□□□□□ -0.62
BBS9-213	ENST00000495426	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
BBS9-213	ENST00000495426	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.2	□□□□□ -0.62
BBS9-213	ENST00000495426	DCC	P43146	1447 aa		11.19	□□□□□ -0.62
BBS9-213	ENST00000495426	SRCAP	Q6ZRS2	3230 aa		11.19	□□□□□ -0.62
BBS9-213	ENST00000495426	CADPS2	Q86UW7	1296 aa		11.19	□□□□□ -0.62
BBS9-213	ENST00000495426	TBX22	Q9Y458	520 aa		11.19	□□□□□ -0.62
BBS9-213	ENST00000495426	HDGF	P51858	240 aa	Known RBP	11.18	□□□□□ -0.62
BBS9-213	ENST00000495426	PTPRU	Q92729	1446 aa		11.18	□□□□□ -0.62
BBS9-213	ENST00000495426	SETBP1	Q9Y6X0	1596 aa		11.17	□□□□□ -0.62
BBS9-213	ENST00000495426	ATF3	P18847	181 aa		11.17	□□□□□ -0.62
BBS9-213	ENST00000495426	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.17	□□□□□ -0.62
BBS9-213	ENST00000495426	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
BBS9-213	ENST00000495426	C19orf44	Q9H6X5	657 aa		11.16	□□□□□ -0.62
BBS9-213	ENST00000495426	RGS12	O14924	1447 aa		11.16	□□□□□ -0.62
BBS9-213	ENST00000495426	MST1R	Q04912	1400 aa		11.16	□□□□□ -0.62
BBS9-213	ENST00000495426	AFF2	P51816	1311 aa		11.15	□□□□□ -0.62
BBS9-213	ENST00000495426	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.15	□□□□□ -0.62
BBS9-213	ENST00000495426	NUTM2E	B1AL46	878 aa	Predicted RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms