RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
RPSA-209ENST00000495394 EVI5LQ96CN4 794 aa11.89□□□□□ -0.51
RPSA-209ENST00000495394 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
RPSA-209ENST00000495394 CD109Q6YHK3 1445 aa11.89□□□□□ -0.51
RPSA-209ENST00000495394 SSFA2P28290 1259 aa11.88□□□□□ -0.51
RPSA-209ENST00000495394 MAP2K1Q02750 393 aaPredicted RBP11.88□□□□□ -0.51
RPSA-209ENST00000495394 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
RPSA-209ENST00000495394 CDC42BPAQ5VT25 1732 aa11.88□□□□□ -0.51
RPSA-209ENST00000495394 RAI14Q9P0K7 980 aa11.88□□□□□ -0.51
RPSA-209ENST00000495394 ITSN2Q9NZM3 1697 aa11.88□□□□□ -0.51
RPSA-209ENST00000495394 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
RPSA-209ENST00000495394 CFAP74Q9C0B2 1584 aa11.87□□□□□ -0.51
RPSA-209ENST00000495394 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
RPSA-209ENST00000495394 SSR1P43307 286 aaKnown RBP11.87□□□□□ -0.51
RPSA-209ENST00000495394 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
RPSA-209ENST00000495394 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
RPSA-209ENST00000495394 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
RPSA-209ENST00000495394 DNTTIP2Q5QJE6 756 aaKnown RBP11.87□□□□□ -0.51
RPSA-209ENST00000495394 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
RPSA-209ENST00000495394 CDC42BPBQ9Y5S2 1711 aa11.86□□□□□ -0.51
RPSA-209ENST00000495394 GOLGA6CA6NDK9 693 aa11.86□□□□□ -0.51
RPSA-209ENST00000495394 GOLGA6BA6NDN3 693 aa11.86□□□□□ -0.51
RPSA-209ENST00000495394 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
RPSA-209ENST00000495394 GOLGA6DP0CG33 693 aa11.86□□□□□ -0.51
RPSA-209ENST00000495394 MTA1Q13330 715 aa11.86□□□□□ -0.51
RPSA-209ENST00000495394 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
RPSA-209ENST00000495394 GOLGA6AQ9NYA3 693 aa11.86□□□□□ -0.51
RPSA-209ENST00000495394 RRBP1Q9P2E9 1410 aaKnown RBP11.86□□□□□ -0.51
RPSA-209ENST00000495394 SCP2P22307 547 aa11.85□□□□□ -0.51
RPSA-209ENST00000495394 ANKRD23Q86SG2 305 aa11.85□□□□□ -0.51
RPSA-209ENST00000495394 MSL3Q8N5Y2 521 aaKnown RBP11.85□□□□□ -0.51
RPSA-209ENST00000495394 ZNF513Q8N8E2 541 aaPredicted RBP11.85□□□□□ -0.51
RPSA-209ENST00000495394 GPBP1L1Q9HC44 474 aaPredicted RBP11.85□□□□□ -0.51
RPSA-209ENST00000495394 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
RPSA-209ENST00000495394 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
RPSA-209ENST00000495394 FBXW7Q969H0 707 aa11.84□□□□□ -0.51
RPSA-209ENST00000495394 PLCH2O75038 1416 aa11.84□□□□□ -0.51
RPSA-209ENST00000495394 LONRF3Q496Y0 759 aa11.83□□□□□ -0.51
RPSA-209ENST00000495394 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.51
RPSA-209ENST00000495394 FEZ2Q9UHY8 353 aaPredicted RBP11.83□□□□□ -0.51
RPSA-209ENST00000495394 DHX16O60231 1041 aaKnown RBP11.83□□□□□ -0.52
RPSA-209ENST00000495394 ZKSCAN8Q15776 578 aaPredicted RBP11.83□□□□□ -0.52
RPSA-209ENST00000495394 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.52
RPSA-209ENST00000495394 NEO1Q92859 1461 aa11.82□□□□□ -0.52
RPSA-209ENST00000495394 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
RPSA-209ENST00000495394 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
RPSA-209ENST00000495394 FANCAO15360 1455 aa11.82□□□□□ -0.52
RPSA-209ENST00000495394 PPFIA4O75335 1185 aa11.82□□□□□ -0.52
RPSA-209ENST00000495394 ZNF280DQ6N043 979 aa11.82□□□□□ -0.52
RPSA-209ENST00000495394 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
RPSA-209ENST00000495394 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
RPSA-209ENST00000495394 SATB1Q01826 763 aa11.81□□□□□ -0.52
RPSA-209ENST00000495394 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
RPSA-209ENST00000495394 ANKRD62A6NC57 917 aa11.8□□□□□ -0.52
RPSA-209ENST00000495394 KIF20AO95235 890 aa11.8□□□□□ -0.52
RPSA-209ENST00000495394 MCCD1P59942 119 aaPredicted RBP11.8□□□□□ -0.52
RPSA-209ENST00000495394 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
RPSA-209ENST00000495394 BANK1Q8NDB2 785 aa11.8□□□□□ -0.52
RPSA-209ENST00000495394 MICAL1Q8TDZ2 1067 aa11.8□□□□□ -0.52
RPSA-209ENST00000495394 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
RPSA-209ENST00000495394 TNNT2P45379 298 aaPredicted RBP11.79□□□□□ -0.52
RPSA-209ENST00000495394 CXorf38Q8TB03 319 aa11.79□□□□□ -0.52
RPSA-209ENST00000495394 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
RPSA-209ENST00000495394 RHBDL3P58872 404 aa11.79□□□□□ -0.52
RPSA-209ENST00000495394 CCDC181Q5TID7 509 aa11.79□□□□□ -0.52
RPSA-209ENST00000495394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPSA-209ENST00000495394 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
RPSA-209ENST00000495394 IGSF5Q9NSI5 407 aa11.78□□□□□ -0.52
RPSA-209ENST00000495394 DMTNQ08495 405 aa11.77□□□□□ -0.52
RPSA-209ENST00000495394 EFCAB2Q5VUJ9 269 aa11.77□□□□□ -0.52
RPSA-209ENST00000495394 GET4Q7L5D6 327 aaPredicted RBP11.77□□□□□ -0.52
RPSA-209ENST00000495394 MYOM3Q5VTT5 1437 aa11.77□□□□□ -0.53
RPSA-209ENST00000495394 AKNAQ7Z591 1439 aa11.77□□□□□ -0.53
RPSA-209ENST00000495394 SAMD9LQ8IVG5 1584 aa11.77□□□□□ -0.53
RPSA-209ENST00000495394 SOCS7O14512 581 aa11.77□□□□□ -0.53
RPSA-209ENST00000495394 EPB41L2O43491 1005 aaKnown RBP11.77□□□□□ -0.53
RPSA-209ENST00000495394 IRF5Q13568 498 aa11.77□□□□□ -0.53
RPSA-209ENST00000495394 MAP7D2Q96T17 732 aa11.77□□□□□ -0.53
RPSA-209ENST00000495394 ZHX1Q9UKY1 873 aaPredicted RBP11.77□□□□□ -0.53
RPSA-209ENST00000495394 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
RPSA-209ENST00000495394 ABCC1P33527 1531 aa11.76□□□□□ -0.53
RPSA-209ENST00000495394 PEX14O75381 377 aa11.75□□□□□ -0.53
RPSA-209ENST00000495394 WDR78Q5VTH9 848 aa11.75□□□□□ -0.53
RPSA-209ENST00000495394 ATL2Q8NHH9 583 aa11.75□□□□□ -0.53
RPSA-209ENST00000495394 MRVI1Q9Y6F6 885 aa11.75□□□□□ -0.53
RPSA-209ENST00000495394 RICTORQ6R327 1708 aa11.75□□□□□ -0.53
RPSA-209ENST00000495394 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
RPSA-209ENST00000495394 HMGB1P1B2RPK0 211 aaPredicted RBP11.75□□□□□ -0.53
RPSA-209ENST00000495394 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
RPSA-209ENST00000495394 CACTIN-AS1Q8N1I8 211 aa11.75□□□□□ -0.53
RPSA-209ENST00000495394 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
RPSA-209ENST00000495394 PLEKHH2Q8IVE3 1493 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 UNCXA6NJT0 531 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 EXOC5O00471 708 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 RGL2O15211 777 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 RNF217Q8TC41 542 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 HIRIP3Q9BW71 556 aaPredicted RBP11.74□□□□□ -0.53
RPSA-209ENST00000495394 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 PNMA2Q9UL42 364 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 ZFYVE27Q5T4F4 411 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms