RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 MYOM1P52179 1685 aa17.18■□□□□ 0.34
SUPT20H-222ENST00000495071 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
SUPT20H-222ENST00000495071 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
SUPT20H-222ENST00000495071 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
SUPT20H-222ENST00000495071 SEC24BO95487 1268 aa17.17■□□□□ 0.34
SUPT20H-222ENST00000495071 TNNQ9UQP3 1299 aa17.17■□□□□ 0.34
SUPT20H-222ENST00000495071 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
SUPT20H-222ENST00000495071 MYOM2P54296 1465 aa17.16■□□□□ 0.34
SUPT20H-222ENST00000495071 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
SUPT20H-222ENST00000495071 MAP3K4Q9Y6R4 1608 aa17.15■□□□□ 0.34
SUPT20H-222ENST00000495071 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
SUPT20H-222ENST00000495071 RLBP1P12271 317 aa17.15■□□□□ 0.34
SUPT20H-222ENST00000495071 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
SUPT20H-222ENST00000495071 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
SUPT20H-222ENST00000495071 ABCA6Q8N139 1617 aa17.14■□□□□ 0.34
SUPT20H-222ENST00000495071 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
SUPT20H-222ENST00000495071 C14orf93Q9H972 538 aaKnown RBP17.13■□□□□ 0.33
SUPT20H-222ENST00000495071 SBNO2Q9Y2G9 1366 aa17.12■□□□□ 0.33
SUPT20H-222ENST00000495071 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
SUPT20H-222ENST00000495071 EVC2Q86UK5 1308 aa17.12■□□□□ 0.33
SUPT20H-222ENST00000495071 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
SUPT20H-222ENST00000495071 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
SUPT20H-222ENST00000495071 AAMPQ13685 434 aa17.11■□□□□ 0.33
SUPT20H-222ENST00000495071 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
SUPT20H-222ENST00000495071 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
SUPT20H-222ENST00000495071 STK26Q9P289 416 aa17.11■□□□□ 0.33
SUPT20H-222ENST00000495071 USP19O94966 1318 aa17.11■□□□□ 0.33
SUPT20H-222ENST00000495071 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
SUPT20H-222ENST00000495071 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
SUPT20H-222ENST00000495071 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
SUPT20H-222ENST00000495071 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
SUPT20H-222ENST00000495071 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
SUPT20H-222ENST00000495071 KIF1BO60333 1816 aa17.09■□□□□ 0.33
SUPT20H-222ENST00000495071 DZIP1LQ8IYY4 767 aaKnown RBP17.08■□□□□ 0.33
SUPT20H-222ENST00000495071 VWDEQ8N2E2 1590 aa17.08■□□□□ 0.32
SUPT20H-222ENST00000495071 INO80Q9ULG1 1556 aaPredicted RBP17.08■□□□□ 0.32
SUPT20H-222ENST00000495071 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
SUPT20H-222ENST00000495071 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
SUPT20H-222ENST00000495071 EFCAB6Q5THR3 1501 aa17.07■□□□□ 0.32
SUPT20H-222ENST00000495071 ARXQ96QS3 562 aa17.07■□□□□ 0.32
SUPT20H-222ENST00000495071 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
SUPT20H-222ENST00000495071 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
SUPT20H-222ENST00000495071 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
SUPT20H-222ENST00000495071 CFAP65Q6ZU64 1925 aaKnown RBP17.06■□□□□ 0.32
SUPT20H-222ENST00000495071 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
SUPT20H-222ENST00000495071 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
SUPT20H-222ENST00000495071 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
SUPT20H-222ENST00000495071 POGKQ9P215 609 aa17.05■□□□□ 0.32
SUPT20H-222ENST00000495071 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
SUPT20H-222ENST00000495071 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
SUPT20H-222ENST00000495071 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
SUPT20H-222ENST00000495071 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
SUPT20H-222ENST00000495071 NPATQ14207 1427 aa17.03■□□□□ 0.32
SUPT20H-222ENST00000495071 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.32
SUPT20H-222ENST00000495071 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
SUPT20H-222ENST00000495071 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.31
SUPT20H-222ENST00000495071 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.31
SUPT20H-222ENST00000495071 PPRC1Q5VV67 1664 aaKnown RBP17.02■□□□□ 0.31
SUPT20H-222ENST00000495071 ANKRD36BQ8N2N9 1353 aa17.01■□□□□ 0.31
SUPT20H-222ENST00000495071 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
SUPT20H-222ENST00000495071 NRXN1Q9ULB1 1477 aa17.01■□□□□ 0.31
SUPT20H-222ENST00000495071 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
SUPT20H-222ENST00000495071 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
SUPT20H-222ENST00000495071 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
SUPT20H-222ENST00000495071 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
SUPT20H-222ENST00000495071 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
SUPT20H-222ENST00000495071 TRIM27P14373 513 aa16.99■□□□□ 0.31
SUPT20H-222ENST00000495071 ADGRB3O60242 1522 aa16.99■□□□□ 0.31
SUPT20H-222ENST00000495071 RIPK4P57078 832 aa16.99■□□□□ 0.31
SUPT20H-222ENST00000495071 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
SUPT20H-222ENST00000495071 C22orf23Q9BZE7 217 aa16.99■□□□□ 0.31
SUPT20H-222ENST00000495071 NSD2O96028 1365 aa16.98■□□□□ 0.31
SUPT20H-222ENST00000495071 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
SUPT20H-222ENST00000495071 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
SUPT20H-222ENST00000495071 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
SUPT20H-222ENST00000495071 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
SUPT20H-222ENST00000495071 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
SUPT20H-222ENST00000495071 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
SUPT20H-222ENST00000495071 EIF5BO60841 1220 aaKnown RBP16.97■□□□□ 0.31
SUPT20H-222ENST00000495071 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.31
SUPT20H-222ENST00000495071 MYO3AQ8NEV4 1616 aa16.96■□□□□ 0.31
SUPT20H-222ENST00000495071 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
SUPT20H-222ENST00000495071 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
SUPT20H-222ENST00000495071 SHPRHQ149N8 1683 aa16.95■□□□□ 0.3
SUPT20H-222ENST00000495071 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
SUPT20H-222ENST00000495071 CD109Q6YHK3 1445 aa16.95■□□□□ 0.3
SUPT20H-222ENST00000495071 L1TD1Q5T7N2 865 aaKnown RBP16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 PUS7Q96PZ0 661 aaKnown RBP16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 A0A1W2PP64 1363 aa16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 IDI1Q13907 227 aa16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
SUPT20H-222ENST00000495071 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
SUPT20H-222ENST00000495071 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
SUPT20H-222ENST00000495071 PRAM1Q96QH2 718 aa16.93■□□□□ 0.3
SUPT20H-222ENST00000495071 PNNQ9H307 717 aaKnown RBP16.93■□□□□ 0.3
SUPT20H-222ENST00000495071 ANTXR1Q9H6X2 564 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms