RNA–Protein interactions for RNA: ENST00000494647.2

NDFIP2-204, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 5

Gene NDFIP2, Length 344 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-204ENST00000494647 PARP9Q8IXQ6 854 aa8.51□□□□□ -1.05
NDFIP2-204ENST00000494647 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
NDFIP2-204ENST00000494647 ZNF697Q5TEC3 545 aa8.5□□□□□ -1.05
NDFIP2-204ENST00000494647 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
NDFIP2-204ENST00000494647 BEGAINQ9BUH8 593 aa8.48□□□□□ -1.05
NDFIP2-204ENST00000494647 SLC24A3Q9HC58 644 aa8.48□□□□□ -1.05
NDFIP2-204ENST00000494647 FDX1P10109 184 aa8.47□□□□□ -1.05
NDFIP2-204ENST00000494647 MMP16P51512 607 aa8.47□□□□□ -1.05
NDFIP2-204ENST00000494647 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
NDFIP2-204ENST00000494647 RPIAP49247 311 aa8.46□□□□□ -1.06
NDFIP2-204ENST00000494647 TRIM67Q6ZTA4 783 aa8.46□□□□□ -1.06
NDFIP2-204ENST00000494647 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
NDFIP2-204ENST00000494647 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
NDFIP2-204ENST00000494647 PDE4DQ08499 809 aa8.45□□□□□ -1.06
NDFIP2-204ENST00000494647 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
NDFIP2-204ENST00000494647 MOXD2PA6NHM9 499 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 C6orf229H3BNL8 230 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 CD2BP2O95400 341 aaKnown RBP8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 MS4A1P11836 297 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 PRR20EP86478 221 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 PRR20CP86479 221 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 PRR20DP86480 221 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 PRR20BP86481 221 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 PRR20AP86496 221 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
NDFIP2-204ENST00000494647 TNFRSF10AO00220 468 aa8.43□□□□□ -1.06
NDFIP2-204ENST00000494647 NDUFV2P19404 249 aa8.43□□□□□ -1.06
NDFIP2-204ENST00000494647 PCDHGC3Q9UN70 934 aa8.43□□□□□ -1.06
NDFIP2-204ENST00000494647 JUNDP17535 347 aa8.42□□□□□ -1.06
NDFIP2-204ENST00000494647 FOXC1Q12948 553 aa8.42□□□□□ -1.06
NDFIP2-204ENST00000494647 TBC1D2Q9BYX2 928 aa8.42□□□□□ -1.06
NDFIP2-204ENST00000494647 GDF9O60383 454 aa8.41□□□□□ -1.06
NDFIP2-204ENST00000494647 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
NDFIP2-204ENST00000494647 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
NDFIP2-204ENST00000494647 TRIM32Q13049 653 aa8.39□□□□□ -1.07
NDFIP2-204ENST00000494647 MTMR2Q13614 643 aa8.39□□□□□ -1.07
NDFIP2-204ENST00000494647 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
NDFIP2-204ENST00000494647 RSBN1LQ6PCB5 846 aaPredicted RBP8.39□□□□□ -1.07
NDFIP2-204ENST00000494647 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
NDFIP2-204ENST00000494647 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
NDFIP2-204ENST00000494647 LCE2BO14633 110 aa8.38□□□□□ -1.07
NDFIP2-204ENST00000494647 GJA5P36382 358 aa8.38□□□□□ -1.07
NDFIP2-204ENST00000494647 FAM187AA6NFU0 413 aa8.37□□□□□ -1.07
NDFIP2-204ENST00000494647 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
NDFIP2-204ENST00000494647 SPTLC1O15269 473 aa8.36□□□□□ -1.07
NDFIP2-204ENST00000494647 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
NDFIP2-204ENST00000494647 DGAT1O75907 488 aa8.35□□□□□ -1.07
NDFIP2-204ENST00000494647 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
NDFIP2-204ENST00000494647 CCNYL3P0C7X3 344 aa8.34□□□□□ -1.07
NDFIP2-204ENST00000494647 PTPRNQ16849 979 aa8.34□□□□□ -1.07
NDFIP2-204ENST00000494647 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
NDFIP2-204ENST00000494647 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
NDFIP2-204ENST00000494647 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
NDFIP2-204ENST00000494647 WNT7AO00755 349 aa8.33□□□□□ -1.08
NDFIP2-204ENST00000494647 CSPP1Q1MSJ5 1256 aa8.33□□□□□ -1.08
NDFIP2-204ENST00000494647 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
NDFIP2-204ENST00000494647 WNT7BP56706 349 aa8.32□□□□□ -1.08
NDFIP2-204ENST00000494647 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
NDFIP2-204ENST00000494647 DESI1Q6ICB0 168 aa8.32□□□□□ -1.08
NDFIP2-204ENST00000494647 TOR4AQ9NXH8 423 aa8.32□□□□□ -1.08
NDFIP2-204ENST00000494647 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
NDFIP2-204ENST00000494647 HRCP23327 699 aa8.31□□□□□ -1.08
NDFIP2-204ENST00000494647 MYT1Q01538 1121 aa8.31□□□□□ -1.08
NDFIP2-204ENST00000494647 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
NDFIP2-204ENST00000494647 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
NDFIP2-204ENST00000494647 CFAP99D6REC4 459 aa8.3□□□□□ -1.08
NDFIP2-204ENST00000494647 PTCRAQ6ISU1 281 aaPredicted RBP8.3□□□□□ -1.08
NDFIP2-204ENST00000494647 MRGPRX2Q96LB1 330 aa8.3□□□□□ -1.08
NDFIP2-204ENST00000494647 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
NDFIP2-204ENST00000494647 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
NDFIP2-204ENST00000494647 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
NDFIP2-204ENST00000494647 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
NDFIP2-204ENST00000494647 GPBP1L1Q9HC44 474 aaPredicted RBP8.29□□□□□ -1.08
NDFIP2-204ENST00000494647 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
NDFIP2-204ENST00000494647 NUTM2BA6NNL0 878 aaPredicted RBP8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 NUTM2EB1AL46 878 aaPredicted RBP8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 SKOR1P84550 965 aa8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 TUSC1Q2TAM9 212 aa8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 NUTM2DQ5VT03 806 aaPredicted RBP8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 NUTM2AQ8IVF1 878 aaPredicted RBP8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 SNIP1Q8TAD8 396 aaKnown RBP8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
NDFIP2-204ENST00000494647 QPCTQ16769 361 aa8.27□□□□□ -1.09
NDFIP2-204ENST00000494647 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
NDFIP2-204ENST00000494647 TSC1Q92574 1164 aa8.27□□□□□ -1.09
NDFIP2-204ENST00000494647 POLR3EQ9NVU0 708 aa8.27□□□□□ -1.09
NDFIP2-204ENST00000494647 CTHP32929 405 aa8.26□□□□□ -1.09
NDFIP2-204ENST00000494647 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
NDFIP2-204ENST00000494647 ST8SIA5O15466 376 aa8.25□□□□□ -1.09
NDFIP2-204ENST00000494647 LILRB3O75022 631 aa8.25□□□□□ -1.09
NDFIP2-204ENST00000494647 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
NDFIP2-204ENST00000494647 EHBP1Q8NDI1 1231 aa8.25□□□□□ -1.09
NDFIP2-204ENST00000494647 AVPP01185 164 aa8.24□□□□□ -1.09
NDFIP2-204ENST00000494647 SMPD1P17405 629 aa8.24□□□□□ -1.09
NDFIP2-204ENST00000494647 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
NDFIP2-204ENST00000494647 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
NDFIP2-204ENST00000494647 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
NDFIP2-204ENST00000494647 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms