RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 MARCH6O60337 910 aa9.66□□□□□ -0.86
SNX13-210ENST00000494402 SOX11P35716 441 aa9.66□□□□□ -0.86
SNX13-210ENST00000494402 TAF7LQ5H9L4 462 aa9.66□□□□□ -0.86
SNX13-210ENST00000494402 METTL3Q86U44 580 aaKnown RBP9.66□□□□□ -0.86
SNX13-210ENST00000494402 NPAS4Q8IUM7 802 aa9.66□□□□□ -0.86
SNX13-210ENST00000494402 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
SNX13-210ENST00000494402 BCCIPQ9P287 314 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNX13-210ENST00000494402 ANKRD33BA6NCL7 494 aa9.65□□□□□ -0.86
SNX13-210ENST00000494402 PHLDB3Q6NSJ2 640 aa9.65□□□□□ -0.86
SNX13-210ENST00000494402 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
SNX13-210ENST00000494402 NPDC1Q9NQX5 325 aaPredicted RBP9.65□□□□□ -0.86
SNX13-210ENST00000494402 CLSTN1O94985 981 aa9.64□□□□□ -0.87
SNX13-210ENST00000494402 TMEM164Q5U3C3 297 aa9.64□□□□□ -0.87
SNX13-210ENST00000494402 C3orf67Q6ZVT6 689 aa9.64□□□□□ -0.87
SNX13-210ENST00000494402 DPH6Q7L8W6 267 aa9.64□□□□□ -0.87
SNX13-210ENST00000494402 NOP9Q86U38 636 aaKnown RBP9.64□□□□□ -0.87
SNX13-210ENST00000494402 TICAM2Q86XR7 235 aa9.64□□□□□ -0.87
SNX13-210ENST00000494402 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
SNX13-210ENST00000494402 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.64□□□□□ -0.87
SNX13-210ENST00000494402 RECKO95980 971 aa9.63□□□□□ -0.87
SNX13-210ENST00000494402 UPF1Q92900 1129 aaKnown RBP eCLIP9.63□□□□□ -0.87
SNX13-210ENST00000494402 CDHR5Q9HBB8 845 aa9.63□□□□□ -0.87
SNX13-210ENST00000494402 PLEKHD1A6NEE1 506 aa9.62□□□□□ -0.87
SNX13-210ENST00000494402 LILRB3O75022 631 aa9.62□□□□□ -0.87
SNX13-210ENST00000494402 CSPP1Q1MSJ5 1256 aa9.62□□□□□ -0.87
SNX13-210ENST00000494402 RSBN1LQ6PCB5 846 aaPredicted RBP9.62□□□□□ -0.87
SNX13-210ENST00000494402 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
SNX13-210ENST00000494402 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
SNX13-210ENST00000494402 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
SNX13-210ENST00000494402 ST18O60284 1047 aa9.61□□□□□ -0.87
SNX13-210ENST00000494402 SSFA2P28290 1259 aa9.61□□□□□ -0.87
SNX13-210ENST00000494402 ERCC5P28715 1186 aaPredicted RBP9.61□□□□□ -0.87
SNX13-210ENST00000494402 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
SNX13-210ENST00000494402 TMA7Q9Y2S6 64 aaKnown RBP9.61□□□□□ -0.87
SNX13-210ENST00000494402 QPCTQ16769 361 aa9.6□□□□□ -0.87
SNX13-210ENST00000494402 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
SNX13-210ENST00000494402 ZMIZ1Q9ULJ6 1067 aa9.6□□□□□ -0.87
SNX13-210ENST00000494402 GJA5P36382 358 aa9.59□□□□□ -0.87
SNX13-210ENST00000494402 SEMA3FQ13275 785 aa9.59□□□□□ -0.87
SNX13-210ENST00000494402 ZNF662Q6ZS27 426 aa9.59□□□□□ -0.87
SNX13-210ENST00000494402 MICAL1Q8TDZ2 1067 aa9.59□□□□□ -0.87
SNX13-210ENST00000494402 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
SNX13-210ENST00000494402 NUTM2BA6NNL0 878 aaPredicted RBP9.58□□□□□ -0.88
SNX13-210ENST00000494402 NUTM2EB1AL46 878 aaPredicted RBP9.58□□□□□ -0.88
SNX13-210ENST00000494402 ATP9BO43861 1147 aa9.58□□□□□ -0.88
SNX13-210ENST00000494402 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
SNX13-210ENST00000494402 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
SNX13-210ENST00000494402 NUTM2DQ5VT03 806 aaPredicted RBP9.58□□□□□ -0.88
SNX13-210ENST00000494402 TBC1D9Q6ZT07 1266 aa9.58□□□□□ -0.88
SNX13-210ENST00000494402 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
SNX13-210ENST00000494402 PXYLP1Q8TE99 480 aa9.58□□□□□ -0.88
SNX13-210ENST00000494402 NOVA2Q9UNW9 492 aaKnown RBP9.58□□□□□ -0.88
SNX13-210ENST00000494402 EVI5O60447 810 aa9.57□□□□□ -0.88
SNX13-210ENST00000494402 GPR37L1O60883 481 aa9.57□□□□□ -0.88
SNX13-210ENST00000494402 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
SNX13-210ENST00000494402 ZNF526Q8TF50 670 aaPredicted RBP9.57□□□□□ -0.88
SNX13-210ENST00000494402 RIPOR2Q9Y4F9 1068 aa9.57□□□□□ -0.88
SNX13-210ENST00000494402 MAP3K7O43318 606 aa9.56□□□□□ -0.88
SNX13-210ENST00000494402 SERPINB4P48594 390 aa9.56□□□□□ -0.88
SNX13-210ENST00000494402 FAM161AQ3B820 660 aa9.56□□□□□ -0.88
SNX13-210ENST00000494402 KANK4Q5T7N3 995 aaPredicted RBP9.56□□□□□ -0.88
SNX13-210ENST00000494402 FBXO33Q7Z6M2 555 aa9.56□□□□□ -0.88
SNX13-210ENST00000494402 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.56□□□□□ -0.88
SNX13-210ENST00000494402 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
SNX13-210ENST00000494402 CUEDC1Q9NWM3 386 aaPredicted RBP9.55□□□□□ -0.88
SNX13-210ENST00000494402 PPME1Q9Y570 386 aa9.55□□□□□ -0.88
SNX13-210ENST00000494402 LOC102724159A0A0B4J2E5 919 aa9.54□□□□□ -0.88
SNX13-210ENST00000494402 PWP2Q15269 919 aaKnown RBP9.54□□□□□ -0.88
SNX13-210ENST00000494402 PRPF38BQ5VTL8 546 aaKnown RBP9.54□□□□□ -0.88
SNX13-210ENST00000494402 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
SNX13-210ENST00000494402 MOXD2PA6NHM9 499 aa9.53□□□□□ -0.88
SNX13-210ENST00000494402 RAB11FIP3O75154 756 aa9.53□□□□□ -0.88
SNX13-210ENST00000494402 RBM46Q8TBY0 533 aaKnown RBP9.53□□□□□ -0.88
SNX13-210ENST00000494402 EPAS1Q99814 870 aa9.53□□□□□ -0.88
SNX13-210ENST00000494402 TANGO6Q9C0B7 1094 aa9.53□□□□□ -0.88
SNX13-210ENST00000494402 MYH16Q9H6N6 1097 aa9.53□□□□□ -0.88
SNX13-210ENST00000494402 ADGRG1Q9Y653 693 aa9.53□□□□□ -0.88
SNX13-210ENST00000494402 LNPKQ9C0E8 428 aa9.52□□□□□ -0.89
SNX13-210ENST00000494402 METTL14Q9HCE5 456 aaKnown RBP9.52□□□□□ -0.89
SNX13-210ENST00000494402 TLDC2A0PJX2 215 aa9.51□□□□□ -0.89
SNX13-210ENST00000494402 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
SNX13-210ENST00000494402 DNAJC2Q99543 621 aaKnown RBP9.51□□□□□ -0.89
SNX13-210ENST00000494402 HMX1Q9NP08 348 aaPredicted RBP9.51□□□□□ -0.89
SNX13-210ENST00000494402 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNX13-210ENST00000494402 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
SNX13-210ENST00000494402 SCAMP3O14828 347 aaKnown RBP9.5□□□□□ -0.89
SNX13-210ENST00000494402 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
SNX13-210ENST00000494402 SLAIN1Q8ND83 568 aa9.5□□□□□ -0.89
SNX13-210ENST00000494402 CLP1Q92989 425 aaKnown RBP9.5□□□□□ -0.89
SNX13-210ENST00000494402 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
SNX13-210ENST00000494402 LZTS3O60299 673 aaPredicted RBP9.49□□□□□ -0.89
SNX13-210ENST00000494402 CD46P15529 392 aa9.49□□□□□ -0.89
SNX13-210ENST00000494402 CCDC181Q5TID7 509 aa9.49□□□□□ -0.89
SNX13-210ENST00000494402 CABLES1Q8TDN4 633 aa9.49□□□□□ -0.89
SNX13-210ENST00000494402 PRDM16Q9HAZ2 1276 aa9.49□□□□□ -0.89
SNX13-210ENST00000494402 PHF14O94880 888 aa9.48□□□□□ -0.89
SNX13-210ENST00000494402 NDUFV2P19404 249 aa9.48□□□□□ -0.89
SNX13-210ENST00000494402 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
SNX13-210ENST00000494402 TAGLNQ01995 201 aaKnown RBP9.48□□□□□ -0.89
SNX13-210ENST00000494402 GORABQ5T7V8 394 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms