RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RGL3Q3MIN7 710 aa12.88□□□□□ -0.35
ITGB1-217ENST00000494395 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
ITGB1-217ENST00000494395 NCOA3Q9Y6Q9 1424 aa12.87□□□□□ -0.35
ITGB1-217ENST00000494395 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
ITGB1-217ENST00000494395 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
ITGB1-217ENST00000494395 LAMC1P11047 1609 aa12.85□□□□□ -0.35
ITGB1-217ENST00000494395 AMOTL2Q9Y2J4 779 aa12.85□□□□□ -0.35
ITGB1-217ENST00000494395 UBAP1LF5GYI3 381 aa12.84□□□□□ -0.35
ITGB1-217ENST00000494395 PROSER2Q86WR7 435 aaPredicted RBP12.84□□□□□ -0.35
ITGB1-217ENST00000494395 KNDC1Q76NI1 1749 aa12.84□□□□□ -0.35
ITGB1-217ENST00000494395 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.84□□□□□ -0.35
ITGB1-217ENST00000494395 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
ITGB1-217ENST00000494395 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
ITGB1-217ENST00000494395 NALCNQ8IZF0 1738 aa12.82□□□□□ -0.36
ITGB1-217ENST00000494395 TECPR2O15040 1411 aa12.82□□□□□ -0.36
ITGB1-217ENST00000494395 TOM1O60784 492 aa12.82□□□□□ -0.36
ITGB1-217ENST00000494395 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
ITGB1-217ENST00000494395 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
ITGB1-217ENST00000494395 ADGRB1O14514 1584 aa12.8□□□□□ -0.36
ITGB1-217ENST00000494395 MSH6P52701 1360 aa12.8□□□□□ -0.36
ITGB1-217ENST00000494395 ROBO2Q9HCK4 1378 aa12.8□□□□□ -0.36
ITGB1-217ENST00000494395 DCCP43146 1447 aa12.79□□□□□ -0.36
ITGB1-217ENST00000494395 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
ITGB1-217ENST00000494395 C14orf93Q9H972 538 aaKnown RBP12.79□□□□□ -0.36
ITGB1-217ENST00000494395 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
ITGB1-217ENST00000494395 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
ITGB1-217ENST00000494395 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
ITGB1-217ENST00000494395 ABCC11Q96J66 1382 aa12.78□□□□□ -0.36
ITGB1-217ENST00000494395 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.36
ITGB1-217ENST00000494395 DCAF11Q8TEB1 546 aa12.77□□□□□ -0.37
ITGB1-217ENST00000494395 FAM135BQ49AJ0 1406 aa12.77□□□□□ -0.37
ITGB1-217ENST00000494395 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
ITGB1-217ENST00000494395 PIP4K2BP78356 416 aa12.76□□□□□ -0.37
ITGB1-217ENST00000494395 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
ITGB1-217ENST00000494395 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-217ENST00000494395 C19orf44Q9H6X5 657 aa12.76□□□□□ -0.37
ITGB1-217ENST00000494395 TMEM132EQ6IEE7 984 aa12.75□□□□□ -0.37
ITGB1-217ENST00000494395 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
ITGB1-217ENST00000494395 SIN3AQ96ST3 1273 aa12.75□□□□□ -0.37
ITGB1-217ENST00000494395 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
ITGB1-217ENST00000494395 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
ITGB1-217ENST00000494395 CDC42BPGQ6DT37 1551 aa12.73□□□□□ -0.37
ITGB1-217ENST00000494395 MST1RQ04912 1400 aa12.73□□□□□ -0.37
ITGB1-217ENST00000494395 PLEKHH1Q9ULM0 1364 aa12.72□□□□□ -0.37
ITGB1-217ENST00000494395 ARHGEF28Q8N1W1 1705 aaKnown RBP12.72□□□□□ -0.37
ITGB1-217ENST00000494395 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
ITGB1-217ENST00000494395 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
ITGB1-217ENST00000494395 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
ITGB1-217ENST00000494395 TRPM1Q7Z4N2 1603 aa12.71□□□□□ -0.37
ITGB1-217ENST00000494395 HSPA1LP34931 641 aa12.71□□□□□ -0.37
ITGB1-217ENST00000494395 L3MBTL2Q969R5 705 aa12.71□□□□□ -0.37
ITGB1-217ENST00000494395 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
ITGB1-217ENST00000494395 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
ITGB1-217ENST00000494395 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
ITGB1-217ENST00000494395 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
ITGB1-217ENST00000494395 STK26Q9P289 416 aa12.7□□□□□ -0.38
ITGB1-217ENST00000494395 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
ITGB1-217ENST00000494395 ADGRB2O60241 1585 aa12.69□□□□□ -0.38
ITGB1-217ENST00000494395 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
ITGB1-217ENST00000494395 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
ITGB1-217ENST00000494395 ATF3P18847 181 aa12.69□□□□□ -0.38
ITGB1-217ENST00000494395 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
ITGB1-217ENST00000494395 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-217ENST00000494395 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-217ENST00000494395 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
ITGB1-217ENST00000494395 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
ITGB1-217ENST00000494395 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
ITGB1-217ENST00000494395 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
ITGB1-217ENST00000494395 NBPF1Q3BBV0 1214 aa12.65□□□□□ -0.38
ITGB1-217ENST00000494395 PRAM1Q96QH2 718 aa12.65□□□□□ -0.38
ITGB1-217ENST00000494395 RGPD8O14715 1765 aaPredicted RBP12.64□□□□□ -0.39
ITGB1-217ENST00000494395 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
ITGB1-217ENST00000494395 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
ITGB1-217ENST00000494395 TRAK1Q9UPV9 953 aa12.64□□□□□ -0.39
ITGB1-217ENST00000494395 USP32Q8NFA0 1604 aa12.63□□□□□ -0.39
ITGB1-217ENST00000494395 NBPF8Q3BBV2 869 aa12.63□□□□□ -0.39
ITGB1-217ENST00000494395 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
ITGB1-217ENST00000494395 MED1Q15648 1581 aaPredicted RBP12.62□□□□□ -0.39
ITGB1-217ENST00000494395 GPRASP1Q5JY77 1395 aa12.62□□□□□ -0.39
ITGB1-217ENST00000494395 TONSLQ96HA7 1378 aa12.62□□□□□ -0.39
ITGB1-217ENST00000494395 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
ITGB1-217ENST00000494395 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
ITGB1-217ENST00000494395 ORAI2Q96SN7 254 aa12.61□□□□□ -0.39
ITGB1-217ENST00000494395 KIF1AQ12756 1690 aa12.61□□□□□ -0.39
ITGB1-217ENST00000494395 RALGAPBQ86X10 1494 aa12.6□□□□□ -0.39
ITGB1-217ENST00000494395 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
ITGB1-217ENST00000494395 QRICH2Q9H0J4 1663 aa12.6□□□□□ -0.39
ITGB1-217ENST00000494395 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
ITGB1-217ENST00000494395 RGL2O15211 777 aa12.59□□□□□ -0.39
ITGB1-217ENST00000494395 POGKQ9P215 609 aa12.59□□□□□ -0.39
ITGB1-217ENST00000494395 ANKARQ7Z5J8 1434 aa12.59□□□□□ -0.39
ITGB1-217ENST00000494395 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
ITGB1-217ENST00000494395 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
ITGB1-217ENST00000494395 PXDNQ92626 1479 aa12.58□□□□□ -0.4
ITGB1-217ENST00000494395 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
ITGB1-217ENST00000494395 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
ITGB1-217ENST00000494395 ROCK2O75116 1388 aaKnown RBP12.57□□□□□ -0.4
ITGB1-217ENST00000494395 JCADQ9P266 1359 aa12.57□□□□□ -0.4
ITGB1-217ENST00000494395 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
ITGB1-217ENST00000494395 ATP7BP35670 1465 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms