RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PPP1R3GB7ZBB8 358 aa12.86□□□□□ -0.35
RIF1-211ENST00000494333 ZMYND10O75800 440 aa12.86□□□□□ -0.35
RIF1-211ENST00000494333 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
RIF1-211ENST00000494333 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
RIF1-211ENST00000494333 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
RIF1-211ENST00000494333 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
RIF1-211ENST00000494333 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
RIF1-211ENST00000494333 PBX2P40425 430 aa12.85□□□□□ -0.35
RIF1-211ENST00000494333 MLECQ14165 292 aa12.85□□□□□ -0.35
RIF1-211ENST00000494333 RICTORQ6R327 1708 aa12.85□□□□□ -0.35
RIF1-211ENST00000494333 POTEMA6NI47 508 aa12.84□□□□□ -0.35
RIF1-211ENST00000494333 HIC1Q14526 733 aa12.84□□□□□ -0.35
RIF1-211ENST00000494333 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
RIF1-211ENST00000494333 GNPATO15228 680 aa12.83□□□□□ -0.36
RIF1-211ENST00000494333 BARGINQ6ZT62 677 aa12.83□□□□□ -0.36
RIF1-211ENST00000494333 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
RIF1-211ENST00000494333 ZFYVE16Q7Z3T8 1539 aa12.83□□□□□ -0.36
RIF1-211ENST00000494333 MTUS2Q5JR59 1369 aa12.82□□□□□ -0.36
RIF1-211ENST00000494333 FECHP22830 423 aa12.82□□□□□ -0.36
RIF1-211ENST00000494333 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
RIF1-211ENST00000494333 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
RIF1-211ENST00000494333 ARHGEF40Q8TER5 1519 aa12.82□□□□□ -0.36
RIF1-211ENST00000494333 ATP10AO60312 1499 aa12.81□□□□□ -0.36
RIF1-211ENST00000494333 PTPRMP28827 1452 aa12.81□□□□□ -0.36
RIF1-211ENST00000494333 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
RIF1-211ENST00000494333 HNRNPMP52272 730 aaKnown RBP eCLIP12.8□□□□□ -0.367e-8■■■□□ 15.7
RIF1-211ENST00000494333 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
RIF1-211ENST00000494333 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
RIF1-211ENST00000494333 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
RIF1-211ENST00000494333 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
RIF1-211ENST00000494333 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
RIF1-211ENST00000494333 PRSS12P56730 875 aa12.79□□□□□ -0.36
RIF1-211ENST00000494333 PADI6Q6TGC4 694 aa12.79□□□□□ -0.36
RIF1-211ENST00000494333 ARHGEF12Q9NZN5 1544 aa12.78□□□□□ -0.36
RIF1-211ENST00000494333 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
RIF1-211ENST00000494333 BCORL1Q5H9F3 1711 aa12.78□□□□□ -0.36
RIF1-211ENST00000494333 CDC42BPBQ9Y5S2 1711 aa12.78□□□□□ -0.36
RIF1-211ENST00000494333 PROX2Q3B8N5 592 aa12.77□□□□□ -0.37
RIF1-211ENST00000494333 TTC13Q8NBP0 860 aa12.77□□□□□ -0.37
RIF1-211ENST00000494333 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
RIF1-211ENST00000494333 C9orf84Q5VXU9 1444 aa12.77□□□□□ -0.37
RIF1-211ENST00000494333 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
RIF1-211ENST00000494333 HECW2Q9P2P5 1572 aa12.76□□□□□ -0.37
RIF1-211ENST00000494333 PREX2Q70Z35 1606 aa12.76□□□□□ -0.37
RIF1-211ENST00000494333 MADDQ8WXG6 1647 aa12.75□□□□□ -0.37
RIF1-211ENST00000494333 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
RIF1-211ENST00000494333 MLH3Q9UHC1 1453 aa12.75□□□□□ -0.37
RIF1-211ENST00000494333 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
RIF1-211ENST00000494333 KDM5CP41229 1560 aa12.74□□□□□ -0.37
RIF1-211ENST00000494333 ABCC1P33527 1531 aa12.74□□□□□ -0.37
RIF1-211ENST00000494333 ZNF644Q9H582 1327 aaPredicted RBP12.74□□□□□ -0.37
RIF1-211ENST00000494333 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
RIF1-211ENST00000494333 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
RIF1-211ENST00000494333 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
RIF1-211ENST00000494333 SLC4A5Q9BY07 1137 aa12.74□□□□□ -0.37
RIF1-211ENST00000494333 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
RIF1-211ENST00000494333 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
RIF1-211ENST00000494333 MAP2K5Q13163 448 aa12.73□□□□□ -0.37
RIF1-211ENST00000494333 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
RIF1-211ENST00000494333 CDC42BPAQ5VT25 1732 aa12.73□□□□□ -0.37
RIF1-211ENST00000494333 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
RIF1-211ENST00000494333 KIAA1107Q9UPP5 1409 aa12.72□□□□□ -0.37
RIF1-211ENST00000494333 SIGLEC1Q9BZZ2 1709 aa12.72□□□□□ -0.37
RIF1-211ENST00000494333 CEBPAP49715 358 aaPredicted RBP12.72□□□□□ -0.37
RIF1-211ENST00000494333 KRTAP3-3Q9BYR6 98 aa12.72□□□□□ -0.37
RIF1-211ENST00000494333 KRTAP3-2Q9BYR7 98 aa12.72□□□□□ -0.37
RIF1-211ENST00000494333 VPS9D1Q9Y2B5 631 aa12.72□□□□□ -0.37
RIF1-211ENST00000494333 IRF6O14896 467 aa12.71□□□□□ -0.37
RIF1-211ENST00000494333 ONECUT3O60422 494 aaPredicted RBP12.71□□□□□ -0.37
RIF1-211ENST00000494333 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
RIF1-211ENST00000494333 SAMD9LQ8IVG5 1584 aa12.71□□□□□ -0.37
RIF1-211ENST00000494333 EHBP1L1Q8N3D4 1523 aa12.71□□□□□ -0.38
RIF1-211ENST00000494333 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
RIF1-211ENST00000494333 KANK4Q5T7N3 995 aaPredicted RBP12.7□□□□□ -0.38
RIF1-211ENST00000494333 SYCP2Q9BX26 1530 aa12.7□□□□□ -0.38
RIF1-211ENST00000494333 PLEKHH2Q8IVE3 1493 aa12.7□□□□□ -0.38
RIF1-211ENST00000494333 RIMS1Q86UR5 1692 aaKnown RBP12.7□□□□□ -0.38
RIF1-211ENST00000494333 DIP2CQ9Y2E4 1556 aa12.69□□□□□ -0.38
RIF1-211ENST00000494333 TK2O00142 265 aa12.69□□□□□ -0.38
RIF1-211ENST00000494333 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
RIF1-211ENST00000494333 KIAA1468Q9P260 1216 aa12.69□□□□□ -0.38
RIF1-211ENST00000494333 ADGRG1Q9Y653 693 aa12.69□□□□□ -0.38
RIF1-211ENST00000494333 ITSN2Q9NZM3 1697 aa12.68□□□□□ -0.38
RIF1-211ENST00000494333 NCOA2Q15596 1464 aa12.68□□□□□ -0.38
RIF1-211ENST00000494333 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
RIF1-211ENST00000494333 HSPA2P54652 639 aa12.68□□□□□ -0.38
RIF1-211ENST00000494333 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
RIF1-211ENST00000494333 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
RIF1-211ENST00000494333 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
RIF1-211ENST00000494333 RABGEF1Q9UJ41 708 aa12.67□□□□□ -0.38
RIF1-211ENST00000494333 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
RIF1-211ENST00000494333 TIAM1Q13009 1591 aa12.66□□□□□ -0.38
RIF1-211ENST00000494333 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
RIF1-211ENST00000494333 AK7Q96M32 723 aa12.66□□□□□ -0.38
RIF1-211ENST00000494333 KIDINS220Q9ULH0 1771 aa12.66□□□□□ -0.38
RIF1-211ENST00000494333 LRRC9Q6ZRR7 1453 aa12.65□□□□□ -0.38
RIF1-211ENST00000494333 TATDN2Q93075 761 aa12.65□□□□□ -0.38
RIF1-211ENST00000494333 AGLP35573 1532 aa12.65□□□□□ -0.38
RIF1-211ENST00000494333 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
RIF1-211ENST00000494333 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms