RNA–Protein interactions for RNA: ENST00000494261.1

CLASP2-222, Transcript of cytoplasmic linker associated protein 2, human

TSL 4

Gene CLASP2, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP2-222	ENST00000494261	PCDHGA10	Q9Y5H3	936 aa		9.2	□□□□□ -0.94
CLASP2-222	ENST00000494261	SPTLC1	O15269	473 aa		9.19	□□□□□ -0.94
CLASP2-222	ENST00000494261	CFAP70	Q5T0N1	1121 aa		9.19	□□□□□ -0.94
CLASP2-222	ENST00000494261	ZNF710	Q8N1W2	664 aa		9.19	□□□□□ -0.94
CLASP2-222	ENST00000494261	JPH4	Q96JJ6	628 aa		9.19	□□□□□ -0.94
CLASP2-222	ENST00000494261	IVNS1ABP	Q9Y6Y0	642 aa		9.19	□□□□□ -0.94
CLASP2-222	ENST00000494261	RSBN1L	Q6PCB5	846 aa	Predicted RBP	9.18	□□□□□ -0.94
CLASP2-222	ENST00000494261	PBRM1	Q86U86	1689 aa		9.18	□□□□□ -0.94
CLASP2-222	ENST00000494261	NDUFB9	Q9Y6M9	179 aa		9.18	□□□□□ -0.94
CLASP2-222	ENST00000494261	ADAMTS12	P58397	1594 aa		9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	ERCC6L2	Q5T890	1561 aa		9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	POTEF	A5A3E0	1075 aa		9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	SEC24B	O95487	1268 aa		9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	WASHC4	Q2M389	1173 aa		9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	SND1	Q7KZF4	910 aa	Known RBP eCLIP	9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	NUTM1	Q86Y26	1132 aa		9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	FBXO41	Q8TF61	875 aa		9.17	□□□□□ -0.94
CLASP2-222	ENST00000494261	USP17L8	P0C7I0	530 aa		9.16	□□□□□ -0.94
CLASP2-222	ENST00000494261	PLCG2	P16885	1265 aa		9.16	□□□□□ -0.94
CLASP2-222	ENST00000494261	SRPK2	P78362	688 aa	Known RBP	9.16	□□□□□ -0.94
CLASP2-222	ENST00000494261	QPCT	Q16769	361 aa		9.16	□□□□□ -0.94
CLASP2-222	ENST00000494261	RBM46	Q8TBY0	533 aa	Known RBP	9.16	□□□□□ -0.94
CLASP2-222	ENST00000494261	ADAMTS19	Q8TE59	1207 aa		9.16	□□□□□ -0.94
CLASP2-222	ENST00000494261	PPP1R12C	Q9BZL4	782 aa		9.16	□□□□□ -0.94
CLASP2-222	ENST00000494261	CARNS1	A5YM72	827 aa		9.15	□□□□□ -0.94
CLASP2-222	ENST00000494261	LILRB3	O75022	631 aa		9.15	□□□□□ -0.94
CLASP2-222	ENST00000494261	COLQ	Q9Y215	455 aa	Predicted RBP	9.15	□□□□□ -0.94
CLASP2-222	ENST00000494261	KIF13A	Q9H1H9	1805 aa		9.15	□□□□□ -0.95
CLASP2-222	ENST00000494261	CARMIL1	Q5VZK9	1371 aa		9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	NUTM2E	B1AL46	878 aa	Predicted RBP	9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	SLC34A2	O95436	690 aa		9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	VRTN	Q9H8Y1	702 aa		9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	RBM27	Q9P2N5	1060 aa	Known RBP	9.14	□□□□□ -0.95
CLASP2-222	ENST00000494261	CEP170	Q5SW79	1584 aa		9.13	□□□□□ -0.95
CLASP2-222	ENST00000494261	MOXD2P	A6NHM9	499 aa		9.13	□□□□□ -0.95
CLASP2-222	ENST00000494261	GJA5	P36382	358 aa		9.13	□□□□□ -0.95
CLASP2-222	ENST00000494261	RTL5	Q5HYW3	569 aa	Predicted RBP	9.13	□□□□□ -0.95
CLASP2-222	ENST00000494261	TTC13	Q8NBP0	860 aa		9.13	□□□□□ -0.95
CLASP2-222	ENST00000494261	KIAA0586	Q9BVV6	1533 aa		9.13	□□□□□ -0.95
CLASP2-222	ENST00000494261	LMTK3	Q96Q04	1460 aa		9.13	□□□□□ -0.95
CLASP2-222	ENST00000494261	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.12	□□□□□ -0.95
CLASP2-222	ENST00000494261	POTEJ	P0CG39	1038 aa		9.12	□□□□□ -0.95
CLASP2-222	ENST00000494261	CD46	P15529	392 aa		9.12	□□□□□ -0.95
CLASP2-222	ENST00000494261	OTUD5	Q96G74	571 aa		9.12	□□□□□ -0.95
CLASP2-222	ENST00000494261	PALM3	A6NDB9	673 aa	Predicted RBP	9.11	□□□□□ -0.95
CLASP2-222	ENST00000494261	LMOD1	P29536	600 aa	Predicted RBP	9.11	□□□□□ -0.95
CLASP2-222	ENST00000494261	C6orf132	Q5T0Z8	1188 aa		9.11	□□□□□ -0.95
CLASP2-222	ENST00000494261	MAMSTR	Q6ZN01	415 aa		9.11	□□□□□ -0.95
CLASP2-222	ENST00000494261	SULF1	Q8IWU6	871 aa		9.11	□□□□□ -0.95
CLASP2-222	ENST00000494261	GJD4	Q96KN9	370 aa	Predicted RBP	9.11	□□□□□ -0.95
CLASP2-222	ENST00000494261	PRG4	Q92954	1404 aa	Predicted RBP	9.11	□□□□□ -0.95
CLASP2-222	ENST00000494261	NDUFV2	P19404	249 aa		9.1	□□□□□ -0.95
CLASP2-222	ENST00000494261	USP35	Q9P2H5	1018 aa		9.1	□□□□□ -0.95
CLASP2-222	ENST00000494261	PCDHB15	Q9Y5E8	787 aa		9.1	□□□□□ -0.95
CLASP2-222	ENST00000494261	HECW2	Q9P2P5	1572 aa		9.1	□□□□□ -0.95
CLASP2-222	ENST00000494261	SHROOM2	Q13796	1616 aa		9.09	□□□□□ -0.95
CLASP2-222	ENST00000494261	CUL7	Q14999	1698 aa		9.08	□□□□□ -0.96
CLASP2-222	ENST00000494261	HMGB1	P09429	215 aa	Known RBP	9.08	□□□□□ -0.96
CLASP2-222	ENST00000494261	VAC14	Q08AM6	782 aa		9.08	□□□□□ -0.96
CLASP2-222	ENST00000494261	PRPF38B	Q5VTL8	546 aa	Known RBP	9.08	□□□□□ -0.96
CLASP2-222	ENST00000494261	CABLES1	Q8TDN4	633 aa		9.08	□□□□□ -0.96
CLASP2-222	ENST00000494261	RCCD1	A6NED2	376 aa		9.07	□□□□□ -0.96
CLASP2-222	ENST00000494261	TMEM88B	A6NKF7	163 aa		9.07	□□□□□ -0.96
CLASP2-222	ENST00000494261	DDX11L8	A8MPP1	907 aa		9.07	□□□□□ -0.96
CLASP2-222	ENST00000494261	ATG7	O95352	703 aa		9.07	□□□□□ -0.96
CLASP2-222	ENST00000494261	PRSS12	P56730	875 aa		9.07	□□□□□ -0.96
CLASP2-222	ENST00000494261	B4GALNT3	Q6L9W6	998 aa		9.07	□□□□□ -0.96
CLASP2-222	ENST00000494261	ALG2	Q9H553	416 aa		9.07	□□□□□ -0.96
CLASP2-222	ENST00000494261	ZBTB3	Q9H5J0	574 aa		9.06	□□□□□ -0.96
CLASP2-222	ENST00000494261	SCUBE2	Q9NQ36	999 aa		9.06	□□□□□ -0.96
CLASP2-222	ENST00000494261	TFIP11	Q9UBB9	837 aa	Known RBP	9.06	□□□□□ -0.96
CLASP2-222	ENST00000494261	RAPGEF2	Q9Y4G8	1499 aa		9.06	□□□□□ -0.96
CLASP2-222	ENST00000494261	CDCA8	Q53HL2	280 aa		9.05	□□□□□ -0.96
CLASP2-222	ENST00000494261	ILDR2	Q71H61	639 aa		9.05	□□□□□ -0.96
CLASP2-222	ENST00000494261	CDCA7L	Q96GN5	454 aa		9.05	□□□□□ -0.96
CLASP2-222	ENST00000494261	GNE	Q9Y223	722 aa	Known RBP	9.05	□□□□□ -0.96
CLASP2-222	ENST00000494261	FOSB	P53539	338 aa		9.04	□□□□□ -0.96
CLASP2-222	ENST00000494261	ZDHHC16	Q969W1	377 aa		9.04	□□□□□ -0.96
CLASP2-222	ENST00000494261	PCDHGA4	Q9Y5G9	962 aa		9.04	□□□□□ -0.96
CLASP2-222	ENST00000494261	RUSC2	Q8N2Y8	1516 aa		9.04	□□□□□ -0.96
CLASP2-222	ENST00000494261	CARMIL2	Q6F5E8	1435 aa		9.04	□□□□□ -0.96
CLASP2-222	ENST00000494261	HMX1	Q9NP08	348 aa	Predicted RBP	9.03	□□□□□ -0.96
CLASP2-222	ENST00000494261	UNCX	A6NJT0	531 aa		9.02	□□□□□ -0.97
CLASP2-222	ENST00000494261	SOX11	P35716	441 aa		9.02	□□□□□ -0.97
CLASP2-222	ENST00000494261	UCN2	Q96RP3	112 aa		9.02	□□□□□ -0.97
CLASP2-222	ENST00000494261	TRIM34	Q9BYJ4	488 aa		9.02	□□□□□ -0.97
CLASP2-222	ENST00000494261	PTPRG	P23470	1445 aa		9.02	□□□□□ -0.97
CLASP2-222	ENST00000494261	TNIK	Q9UKE5	1360 aa		9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	GPR37L1	O60883	481 aa		9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	CTDSPL2	Q05D32	466 aa		9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	C3orf67	Q6ZVT6	689 aa		9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	ZNF454	Q8N9F8	522 aa		9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	EYA1	Q99502	592 aa		9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	MAFB	Q9Y5Q3	323 aa	Predicted RBP	9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	PRX	Q9BXM0	1461 aa		9.01	□□□□□ -0.97
CLASP2-222	ENST00000494261	RBM47	A0AV96	593 aa	Known RBP	9	□□□□□ -0.97
CLASP2-222	ENST00000494261	KDM4A	O75164	1064 aa		9	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms