RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
PTPN12-212ENST00000494248 SPSB2Q99619 263 aa7.11□□□□□ -1.27
PTPN12-212ENST00000494248 ADAMTS8Q9UP79 889 aa7.1□□□□□ -1.27
PTPN12-212ENST00000494248 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
PTPN12-212ENST00000494248 SMPD1P17405 629 aa7.09□□□□□ -1.27
PTPN12-212ENST00000494248 PTGDRQ13258 359 aa7.09□□□□□ -1.27
PTPN12-212ENST00000494248 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
PTPN12-212ENST00000494248 TTC24A2A3L6 582 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-212ENST00000494248 VSIG8P0DPA2 414 aa7.08□□□□□ -1.28
PTPN12-212ENST00000494248 MLLT3P42568 568 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-212ENST00000494248 RBM46Q8TBY0 533 aaKnown RBP7.08□□□□□ -1.28
PTPN12-212ENST00000494248 CD2BP2O95400 341 aaKnown RBP7.07□□□□□ -1.28
PTPN12-212ENST00000494248 FAM160A2Q8N612 972 aaPredicted RBP7.07□□□□□ -1.28
PTPN12-212ENST00000494248 THAP11Q96EK4 314 aa7.07□□□□□ -1.28
PTPN12-212ENST00000494248 PRDM9Q9NQV7 894 aa7.06□□□□□ -1.28
PTPN12-212ENST00000494248 J3QL48 77 aa7.05□□□□□ -1.28
PTPN12-212ENST00000494248 IRS1P35568 1242 aa7.05□□□□□ -1.28
PTPN12-212ENST00000494248 KRTAP17-1Q9BYP8 105 aa7.05□□□□□ -1.28
PTPN12-212ENST00000494248 MORN1Q5T089 497 aa7.03□□□□□ -1.28
PTPN12-212ENST00000494248 MSTNO14793 375 aa7.02□□□□□ -1.29
PTPN12-212ENST00000494248 HPS1Q92902 700 aa7.02□□□□□ -1.29
PTPN12-212ENST00000494248 KRTAP4-2Q9BYR5 136 aa7.02□□□□□ -1.29
PTPN12-212ENST00000494248 WNT7AO00755 349 aa7.01□□□□□ -1.29
PTPN12-212ENST00000494248 KANK3Q6NY19 840 aa7.01□□□□□ -1.29
PTPN12-212ENST00000494248 SNIP1Q8TAD8 396 aaKnown RBP7.01□□□□□ -1.29
PTPN12-212ENST00000494248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7□□□□□ -1.29
PTPN12-212ENST00000494248 PXYLP1Q8TE99 480 aa7□□□□□ -1.29
PTPN12-212ENST00000494248 BBXQ8WY36 941 aaPredicted RBP7□□□□□ -1.29
PTPN12-212ENST00000494248 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
PTPN12-212ENST00000494248 WDR70Q9NW82 654 aa7□□□□□ -1.29
PTPN12-212ENST00000494248 K7ELQ4 463 aaPredicted RBP6.99□□□□□ -1.29
PTPN12-212ENST00000494248 SPOCK3Q9BQ16 436 aa6.99□□□□□ -1.29
PTPN12-212ENST00000494248 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
PTPN12-212ENST00000494248 SLC27A5Q9Y2P5 690 aa6.99□□□□□ -1.29
PTPN12-212ENST00000494248 FUT2Q10981 343 aa6.98□□□□□ -1.29
PTPN12-212ENST00000494248 TRIM32Q13049 653 aa6.96□□□□□ -1.3
PTPN12-212ENST00000494248 BRICD5Q6PL45 260 aa6.96□□□□□ -1.3
PTPN12-212ENST00000494248 FMNL1O95466 1100 aaPredicted RBP6.95□□□□□ -1.3
PTPN12-212ENST00000494248 RNF19BQ6ZMZ0 732 aa6.95□□□□□ -1.3
PTPN12-212ENST00000494248 NUTM2FA1L443 756 aa6.94□□□□□ -1.3
PTPN12-212ENST00000494248 METTL3Q86U44 580 aaKnown RBP6.94□□□□□ -1.3
PTPN12-212ENST00000494248 SPRYD3Q8NCJ5 442 aa6.94□□□□□ -1.3
PTPN12-212ENST00000494248 ZBTB24O43167 697 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-212ENST00000494248 ATP6V1AP38606 617 aa6.93□□□□□ -1.3
PTPN12-212ENST00000494248 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
PTPN12-212ENST00000494248 TRIM46Q7Z4K8 759 aa6.93□□□□□ -1.3
PTPN12-212ENST00000494248 SALL2Q9Y467 1007 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-212ENST00000494248 PROCP04070 461 aa6.92□□□□□ -1.3
PTPN12-212ENST00000494248 FECHP22830 423 aa6.92□□□□□ -1.3
PTPN12-212ENST00000494248 SKOR1P84550 965 aa6.92□□□□□ -1.3
PTPN12-212ENST00000494248 NLRP7Q8WX94 980 aa6.92□□□□□ -1.3
PTPN12-212ENST00000494248 GOLGA2P5Q9HBQ8 144 aa6.92□□□□□ -1.3
PTPN12-212ENST00000494248 OATP04181 439 aa6.91□□□□□ -1.3
PTPN12-212ENST00000494248 BMP1P13497 986 aa6.91□□□□□ -1.3
PTPN12-212ENST00000494248 MSS51Q4VC12 460 aa6.91□□□□□ -1.3
PTPN12-212ENST00000494248 ITGB2P05107 769 aa6.9□□□□□ -1.3
PTPN12-212ENST00000494248 GCGRP47871 477 aa6.9□□□□□ -1.3
PTPN12-212ENST00000494248 RDH13Q8NBN7 331 aa6.9□□□□□ -1.3
PTPN12-212ENST00000494248 MMP16P51512 607 aa6.89□□□□□ -1.31
PTPN12-212ENST00000494248 RC3H1Q5TC82 1133 aaKnown RBP6.89□□□□□ -1.31
PTPN12-212ENST00000494248 RSPH4AQ5TD94 716 aa6.89□□□□□ -1.31
PTPN12-212ENST00000494248 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
PTPN12-212ENST00000494248 FCHSD2O94868 740 aa6.88□□□□□ -1.31
PTPN12-212ENST00000494248 DAXXQ9UER7 740 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-212ENST00000494248 GALNT6Q8NCL4 622 aa6.87□□□□□ -1.31
PTPN12-212ENST00000494248 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
PTPN12-212ENST00000494248 ZNF385CQ66K41 422 aaPredicted RBP6.86□□□□□ -1.31
PTPN12-212ENST00000494248 KCNV2Q8TDN2 545 aa6.86□□□□□ -1.31
PTPN12-212ENST00000494248 SIAH2O43255 324 aa6.85□□□□□ -1.31
PTPN12-212ENST00000494248 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
PTPN12-212ENST00000494248 PHOX2BQ99453 314 aa6.85□□□□□ -1.31
PTPN12-212ENST00000494248 REPIN1Q9BWE0 567 aaKnown RBP6.85□□□□□ -1.31
PTPN12-212ENST00000494248 DXOO77932 396 aaKnown RBP6.84□□□□□ -1.31
PTPN12-212ENST00000494248 KRT76Q01546 638 aa6.84□□□□□ -1.31
PTPN12-212ENST00000494248 PAXIP1Q6ZW49 1069 aaPredicted RBP6.83□□□□□ -1.32
PTPN12-212ENST00000494248 SVOPQ8N4V2 548 aa6.83□□□□□ -1.32
PTPN12-212ENST00000494248 SCARF2Q96GP6 870 aaPredicted RBP6.83□□□□□ -1.32
PTPN12-212ENST00000494248 CFAP44Q96MT7 982 aa6.83□□□□□ -1.32
PTPN12-212ENST00000494248 CAPN5O15484 640 aaPredicted RBP6.82□□□□□ -1.32
PTPN12-212ENST00000494248 ZFP42Q96MM3 310 aa6.82□□□□□ -1.32
PTPN12-212ENST00000494248 ARHGEF15O94989 841 aa6.81□□□□□ -1.32
PTPN12-212ENST00000494248 MARSP56192 900 aaKnown RBP6.81□□□□□ -1.32
PTPN12-212ENST00000494248 WNT7BP56706 349 aa6.81□□□□□ -1.32
PTPN12-212ENST00000494248 HIC1Q14526 733 aa6.81□□□□□ -1.32
PTPN12-212ENST00000494248 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
PTPN12-212ENST00000494248 SOBPA7XYQ1 873 aa6.79□□□□□ -1.32
PTPN12-212ENST00000494248 SEMA3EO15041 775 aa6.79□□□□□ -1.32
PTPN12-212ENST00000494248 HLA-CQ95604 372 aa6.79□□□□□ -1.32
PTPN12-212ENST00000494248 DCAF5Q96JK2 942 aa6.79□□□□□ -1.32
PTPN12-212ENST00000494248 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
PTPN12-212ENST00000494248 GPR37O15354 613 aa6.78□□□□□ -1.32
PTPN12-212ENST00000494248 PTCRAQ6ISU1 281 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-212ENST00000494248 CNTNAP3BQ96NU0 1288 aa6.78□□□□□ -1.32
PTPN12-212ENST00000494248 CNTNAP3Q9BZ76 1288 aa6.78□□□□□ -1.32
PTPN12-212ENST00000494248 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-212ENST00000494248 RBM26Q5T8P6 1007 aaKnown RBP6.77□□□□□ -1.33
PTPN12-212ENST00000494248 SLURP2P0DP57 97 aa6.76□□□□□ -1.33
PTPN12-212ENST00000494248 Q3C1V9 767 aa6.76□□□□□ -1.33
PTPN12-212ENST00000494248 GNPATO15228 680 aa6.75□□□□□ -1.33
PTPN12-212ENST00000494248 BAG6P46379 1132 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms