RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 FMNL1O95466 1100 aaPredicted RBP15.65■□□□□ 0.1
HMGB3P14-201ENST00000494195 BRICD5Q6PL45 260 aa15.65■□□□□ 0.1
HMGB3P14-201ENST00000494195 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
HMGB3P14-201ENST00000494195 RNF19BQ6ZMZ0 732 aa15.64■□□□□ 0.09
HMGB3P14-201ENST00000494195 TLL1O43897 1013 aa15.63■□□□□ 0.09
HMGB3P14-201ENST00000494195 PROCA1Q8NCQ7 364 aaPredicted RBP15.63■□□□□ 0.09
HMGB3P14-201ENST00000494195 CSPP1Q1MSJ5 1256 aa15.62■□□□□ 0.09
HMGB3P14-201ENST00000494195 PRPF38BQ5VTL8 546 aaKnown RBP15.62■□□□□ 0.09
HMGB3P14-201ENST00000494195 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
HMGB3P14-201ENST00000494195 C6orf229H3BNL8 230 aa15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 SPSB2Q99619 263 aa15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 ZBTB3Q9H5J0 574 aa15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 ADH1BP00325 375 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 MTMR2Q13614 643 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 IFFO2Q5TF58 517 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 PLA2G2EQ9NZK7 142 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 NKX2-3Q8TAU0 364 aa15.59■□□□□ 0.09
HMGB3P14-201ENST00000494195 SYMPKQ92797 1274 aaKnown RBP15.59■□□□□ 0.09
HMGB3P14-201ENST00000494195 SPDYE5A6NIY4 337 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 LILRB3O75022 631 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 HRCP23327 699 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 QPCTQ16769 361 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 RETREG3Q86VR2 466 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 USB1Q9BQ65 265 aaKnown RBP15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2BA6NNL0 878 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2EB1AL46 878 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2DQ5VT03 806 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2AQ8IVF1 878 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 MSS51Q4VC12 460 aa15.54■□□□□ 0.08
HMGB3P14-201ENST00000494195 FAM160A2Q8N612 972 aaPredicted RBP15.53■□□□□ 0.08
HMGB3P14-201ENST00000494195 PPP2R2DQ66LE6 453 aa15.52■□□□□ 0.08
HMGB3P14-201ENST00000494195 SLC6A16Q9GZN6 736 aa15.52■□□□□ 0.08
HMGB3P14-201ENST00000494195 PRR7Q8TB68 274 aa15.51■□□□□ 0.07
HMGB3P14-201ENST00000494195 RTL5Q5HYW3 569 aaPredicted RBP15.5■□□□□ 0.07
HMGB3P14-201ENST00000494195 FBXO31Q5XUX0 539 aaPredicted RBP15.48■□□□□ 0.07
HMGB3P14-201ENST00000494195 CFAP99D6REC4 459 aa15.47■□□□□ 0.07
HMGB3P14-201ENST00000494195 S1PR4O95977 384 aa15.47■□□□□ 0.07
HMGB3P14-201ENST00000494195 PRDM9Q9NQV7 894 aa15.47■□□□□ 0.07
HMGB3P14-201ENST00000494195 JUNDP17535 347 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 GGCXP38435 758 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 MMP16P51512 607 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 DESI1Q6ICB0 168 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 DXOO77932 396 aaKnown RBP15.44■□□□□ 0.06
HMGB3P14-201ENST00000494195 RFC5P40937 340 aa15.44■□□□□ 0.06
HMGB3P14-201ENST00000494195 PPP1R18Q6NYC8 613 aa15.43■□□□□ 0.06
HMGB3P14-201ENST00000494195 HELBQ8NG08 1087 aaPredicted RBP15.42■□□□□ 0.06
HMGB3P14-201ENST00000494195 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.42■□□□□ 0.06
HMGB3P14-201ENST00000494195 A0A0G2JS52 829 aa15.41■□□□□ 0.06
HMGB3P14-201ENST00000494195 TSC1Q92574 1164 aa15.4■□□□□ 0.06
HMGB3P14-201ENST00000494195 RNF223E7ERA6 249 aa15.38■□□□□ 0.05
HMGB3P14-201ENST00000494195 TMEM259Q4ZIN3 620 aa15.38■□□□□ 0.05
HMGB3P14-201ENST00000494195 AP1G2O75843 785 aa15.36■□□□□ 0.05
HMGB3P14-201ENST00000494195 PTPRNQ16849 979 aa15.36■□□□□ 0.05
HMGB3P14-201ENST00000494195 LYPD8Q6UX82 237 aa15.36■□□□□ 0.05
HMGB3P14-201ENST00000494195 PPEF1O14829 653 aaPredicted RBP15.35■□□□□ 0.05
HMGB3P14-201ENST00000494195 ANKLE1Q8NAG6 615 aa15.35■□□□□ 0.05
HMGB3P14-201ENST00000494195 FCF1Q9Y324 198 aaKnown RBP15.34■□□□□ 0.05
HMGB3P14-201ENST00000494195 CTDSPL2Q05D32 466 aa15.33■□□□□ 0.04
HMGB3P14-201ENST00000494195 NUDT12Q9BQG2 462 aa15.32■□□□□ 0.04
HMGB3P14-201ENST00000494195 PER1O15534 1290 aaPredicted RBP15.31■□□□□ 0.04
HMGB3P14-201ENST00000494195 CCNYL3P0C7X3 344 aa15.31■□□□□ 0.04
HMGB3P14-201ENST00000494195 USP17L8P0C7I0 530 aa15.3■□□□□ 0.04
HMGB3P14-201ENST00000494195 BANK1Q8NDB2 785 aa15.3■□□□□ 0.04
HMGB3P14-201ENST00000494195 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
HMGB3P14-201ENST00000494195 EVA1BQ9NVM1 165 aa15.26■□□□□ 0.03
HMGB3P14-201ENST00000494195 PLA2G2CQ5R387 149 aa15.25■□□□□ 0.03
HMGB3P14-201ENST00000494195 LRRN4Q8WUT4 740 aa15.25■□□□□ 0.03
HMGB3P14-201ENST00000494195 F12P00748 615 aaPredicted RBP15.24■□□□□ 0.03
HMGB3P14-201ENST00000494195 KCNH2Q12809 1159 aa15.23■□□□□ 0.03
HMGB3P14-201ENST00000494195 CTHP32929 405 aa15.22■□□□□ 0.03
HMGB3P14-201ENST00000494195 MAP10Q9P2G4 905 aa15.21■□□□□ 0.03
HMGB3P14-201ENST00000494195 SOCS7O14512 581 aa15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 ZBTB24O43167 697 aaPredicted RBP15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 PTCRAQ6ISU1 281 aaPredicted RBP15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 HMX1Q9NP08 348 aaPredicted RBP15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 RPIAP49247 311 aa15.18■□□□□ 0.02
HMGB3P14-201ENST00000494195 SNRKQ9NRH2 765 aa15.18■□□□□ 0.02
HMGB3P14-201ENST00000494195 EMID1Q96A84 441 aaPredicted RBP15.17■□□□□ 0.02
HMGB3P14-201ENST00000494195 RGS20O76081 388 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 SLC19A1P41440 591 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 LIAT1Q6ZQX7 453 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 MTMR14Q8NCE2 650 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 MCM6Q14566 821 aa15.15■□□□□ 0.02
HMGB3P14-201ENST00000494195 PRKD2Q9BZL6 878 aa15.15■□□□□ 0.02
HMGB3P14-201ENST00000494195 APBB1O00213 710 aa15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 FLIIQ13045 1269 aa15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 NR6A1Q15406 480 aa15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 V9GY48 417 aaPredicted RBP15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
HMGB3P14-201ENST00000494195 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
HMGB3P14-201ENST00000494195 TRIM32Q13049 653 aa15.12■□□□□ 0.01
HMGB3P14-201ENST00000494195 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
HMGB3P14-201ENST00000494195 ARMC2Q8NEN0 867 aa15.11■□□□□ 0.01
HMGB3P14-201ENST00000494195 EPS8L1Q8TE68 723 aa15.11■□□□□ 0.01
HMGB3P14-201ENST00000494195 CD2BP2O95400 341 aaKnown RBP15.1■□□□□ 0.01
HMGB3P14-201ENST00000494195 SPRYD7Q5W111 196 aa15.09■□□□□ 0.01
HMGB3P14-201ENST00000494195 PNMA1Q8ND90 353 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms