RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
LRCH3-219ENST00000494069 ORAI2Q96SN7 254 aa12.61□□□□□ -0.39
LRCH3-219ENST00000494069 IFT172Q9UG01 1749 aa12.61□□□□□ -0.39
LRCH3-219ENST00000494069 PRAG1Q86YV5 1406 aa12.61□□□□□ -0.39
LRCH3-219ENST00000494069 C1orf167Q5SNV9 1468 aa12.6□□□□□ -0.39
LRCH3-219ENST00000494069 LRP6O75581 1613 aa12.6□□□□□ -0.39
LRCH3-219ENST00000494069 CFAP70Q5T0N1 1121 aa12.6□□□□□ -0.39
LRCH3-219ENST00000494069 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
LRCH3-219ENST00000494069 PLEKHH1Q9ULM0 1364 aa12.59□□□□□ -0.39
LRCH3-219ENST00000494069 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
LRCH3-219ENST00000494069 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
LRCH3-219ENST00000494069 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
LRCH3-219ENST00000494069 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
LRCH3-219ENST00000494069 C14orf93Q9H972 538 aaKnown RBP12.58□□□□□ -0.4
LRCH3-219ENST00000494069 ABCC11Q96J66 1382 aa12.57□□□□□ -0.4
LRCH3-219ENST00000494069 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
LRCH3-219ENST00000494069 HRCP23327 699 aa12.57□□□□□ -0.4
LRCH3-219ENST00000494069 SPATA31A6Q5VVP1 1343 aa12.57□□□□□ -0.4
LRCH3-219ENST00000494069 TECPR2O15040 1411 aa12.56□□□□□ -0.4
LRCH3-219ENST00000494069 NHSL1Q5SYE7 1610 aa12.56□□□□□ -0.4
LRCH3-219ENST00000494069 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
LRCH3-219ENST00000494069 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
LRCH3-219ENST00000494069 YTHDC2Q9H6S0 1430 aaKnown RBP12.55□□□□□ -0.4
LRCH3-219ENST00000494069 MEX3CQ5U5Q3 659 aaKnown RBP12.55□□□□□ -0.4
LRCH3-219ENST00000494069 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
LRCH3-219ENST00000494069 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
LRCH3-219ENST00000494069 MYOM2P54296 1465 aa12.54□□□□□ -0.4
LRCH3-219ENST00000494069 ESCO1Q5FWF5 840 aa12.54□□□□□ -0.4
LRCH3-219ENST00000494069 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.4
LRCH3-219ENST00000494069 DCAF11Q8TEB1 546 aa12.53□□□□□ -0.4
LRCH3-219ENST00000494069 SOS2Q07890 1332 aaPredicted RBP12.53□□□□□ -0.4
LRCH3-219ENST00000494069 PNPLA6Q8IY17 1366 aa12.53□□□□□ -0.4
LRCH3-219ENST00000494069 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.41
LRCH3-219ENST00000494069 DHX57Q6P158 1386 aaKnown RBP12.52□□□□□ -0.41
LRCH3-219ENST00000494069 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.41
LRCH3-219ENST00000494069 KNDC1Q76NI1 1749 aa12.51□□□□□ -0.41
LRCH3-219ENST00000494069 FOXO3O43524 673 aa12.51□□□□□ -0.41
LRCH3-219ENST00000494069 SIRT1Q96EB6 747 aa12.51□□□□□ -0.41
LRCH3-219ENST00000494069 PRAM1Q96QH2 718 aa12.51□□□□□ -0.41
LRCH3-219ENST00000494069 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
LRCH3-219ENST00000494069 LAMC1P11047 1609 aa12.49□□□□□ -0.41
LRCH3-219ENST00000494069 ADAMTS2O95450 1211 aa12.49□□□□□ -0.41
LRCH3-219ENST00000494069 ADGRB1O14514 1584 aa12.48□□□□□ -0.41
LRCH3-219ENST00000494069 AFF2P51816 1311 aa12.48□□□□□ -0.41
LRCH3-219ENST00000494069 ZNF772Q68DY9 489 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-219ENST00000494069 C8orf37Q96NL8 207 aa12.48□□□□□ -0.41
LRCH3-219ENST00000494069 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
LRCH3-219ENST00000494069 POGKQ9P215 609 aa12.47□□□□□ -0.41
LRCH3-219ENST00000494069 PXDNQ92626 1479 aa12.46□□□□□ -0.41
LRCH3-219ENST00000494069 HIRIP3Q9BW71 556 aaPredicted RBP12.46□□□□□ -0.41
LRCH3-219ENST00000494069 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
LRCH3-219ENST00000494069 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
LRCH3-219ENST00000494069 DLC1Q96QB1 1528 aa12.44□□□□□ -0.42
LRCH3-219ENST00000494069 RXRBP28702 533 aa12.44□□□□□ -0.42
LRCH3-219ENST00000494069 NGLY1Q96IV0 654 aa12.44□□□□□ -0.42
LRCH3-219ENST00000494069 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
LRCH3-219ENST00000494069 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
LRCH3-219ENST00000494069 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
LRCH3-219ENST00000494069 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
LRCH3-219ENST00000494069 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
LRCH3-219ENST00000494069 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
LRCH3-219ENST00000494069 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
LRCH3-219ENST00000494069 SIN3AQ96ST3 1273 aa12.42□□□□□ -0.42
LRCH3-219ENST00000494069 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
LRCH3-219ENST00000494069 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
LRCH3-219ENST00000494069 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
LRCH3-219ENST00000494069 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
LRCH3-219ENST00000494069 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
LRCH3-219ENST00000494069 WASLO00401 505 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-219ENST00000494069 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-219ENST00000494069 CABLES1Q8TDN4 633 aa12.39□□□□□ -0.43
LRCH3-219ENST00000494069 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-219ENST00000494069 USP21Q9UK80 565 aa12.39□□□□□ -0.43
LRCH3-219ENST00000494069 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
LRCH3-219ENST00000494069 PSME1Q06323 249 aa12.38□□□□□ -0.43
LRCH3-219ENST00000494069 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
LRCH3-219ENST00000494069 L3MBTL2Q969R5 705 aa12.38□□□□□ -0.43
LRCH3-219ENST00000494069 ADGRB2O60241 1585 aa12.38□□□□□ -0.43
LRCH3-219ENST00000494069 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
LRCH3-219ENST00000494069 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
LRCH3-219ENST00000494069 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
LRCH3-219ENST00000494069 RGS12O14924 1447 aa12.37□□□□□ -0.43
LRCH3-219ENST00000494069 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
LRCH3-219ENST00000494069 ARHGEF28Q8N1W1 1705 aaKnown RBP12.36□□□□□ -0.43
LRCH3-219ENST00000494069 TNS3Q68CZ2 1445 aa12.36□□□□□ -0.43
LRCH3-219ENST00000494069 BCL9LQ86UU0 1499 aa12.35□□□□□ -0.43
LRCH3-219ENST00000494069 SBNO1A3KN83 1393 aa12.35□□□□□ -0.43
LRCH3-219ENST00000494069 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
LRCH3-219ENST00000494069 TULP4Q9NRJ4 1543 aa12.35□□□□□ -0.43
LRCH3-219ENST00000494069 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
LRCH3-219ENST00000494069 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
LRCH3-219ENST00000494069 CDK19Q9BWU1 502 aa12.34□□□□□ -0.43
LRCH3-219ENST00000494069 ATRNO75882 1429 aa12.34□□□□□ -0.43
LRCH3-219ENST00000494069 KIAA1210Q9ULL0 1709 aa12.32□□□□□ -0.44
LRCH3-219ENST00000494069 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
LRCH3-219ENST00000494069 NGDNQ8NEJ9 315 aaKnown RBP12.32□□□□□ -0.44
LRCH3-219ENST00000494069 ATP7BP35670 1465 aa12.32□□□□□ -0.44
LRCH3-219ENST00000494069 EIF3AQ14152 1382 aaKnown RBP12.31□□□□□ -0.44
LRCH3-219ENST00000494069 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
LRCH3-219ENST00000494069 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms