RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 TRAK1Q9UPV9 953 aa14.48□□□□□ -0.09
RFC2-211ENST00000494019 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
RFC2-211ENST00000494019 NBPF1Q3BBV0 1214 aa14.47□□□□□ -0.09
RFC2-211ENST00000494019 WAPLQ7Z5K2 1190 aa14.46□□□□□ -0.09
RFC2-211ENST00000494019 C19orf44Q9H6X5 657 aa14.46□□□□□ -0.09
RFC2-211ENST00000494019 ATF3P18847 181 aa14.45□□□□□ -0.1
RFC2-211ENST00000494019 PIP4K2BP78356 416 aa14.45□□□□□ -0.1
RFC2-211ENST00000494019 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
RFC2-211ENST00000494019 MST1RQ04912 1400 aa14.44□□□□□ -0.1
RFC2-211ENST00000494019 SAFB2Q14151 953 aaKnown RBP eCLIP14.44□□□□□ -0.1
RFC2-211ENST00000494019 POGKQ9P215 609 aa14.44□□□□□ -0.1
RFC2-211ENST00000494019 TIMELESSQ9UNS1 1208 aa14.44□□□□□ -0.1
RFC2-211ENST00000494019 PHLPP1O60346 1717 aa14.44□□□□□ -0.1
RFC2-211ENST00000494019 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
RFC2-211ENST00000494019 ILDR1Q86SU0 546 aaPredicted RBP14.43□□□□□ -0.1
RFC2-211ENST00000494019 CADPS2Q86UW7 1296 aa14.43□□□□□ -0.1
RFC2-211ENST00000494019 SIRT1Q96EB6 747 aa14.43□□□□□ -0.1
RFC2-211ENST00000494019 GPRASP1Q5JY77 1395 aa14.43□□□□□ -0.1
RFC2-211ENST00000494019 NHSL1Q5SYE7 1610 aa14.42□□□□□ -0.1
RFC2-211ENST00000494019 USP32Q8NFA0 1604 aa14.42□□□□□ -0.1
RFC2-211ENST00000494019 EIF3AQ14152 1382 aaKnown RBP14.41□□□□□ -0.1
RFC2-211ENST00000494019 KIF1AQ12756 1690 aa14.4□□□□□ -0.1
RFC2-211ENST00000494019 C1orf167Q5SNV9 1468 aa14.39□□□□□ -0.11
RFC2-211ENST00000494019 CARD11Q9BXL7 1154 aa14.39□□□□□ -0.11
RFC2-211ENST00000494019 SLAIN2Q9P270 581 aa14.39□□□□□ -0.11
RFC2-211ENST00000494019 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
RFC2-211ENST00000494019 MINK1Q8N4C8 1332 aaPredicted RBP14.39□□□□□ -0.11
RFC2-211ENST00000494019 TULP4Q9NRJ4 1543 aa14.38□□□□□ -0.11
RFC2-211ENST00000494019 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
RFC2-211ENST00000494019 CENPJQ9HC77 1338 aaPredicted RBP14.38□□□□□ -0.11
RFC2-211ENST00000494019 AHDC1Q5TGY3 1603 aaPredicted RBP14.37□□□□□ -0.11
RFC2-211ENST00000494019 COL16A1Q07092 1604 aaPredicted RBP14.37□□□□□ -0.11
RFC2-211ENST00000494019 NUTM2FA1L443 756 aa14.35□□□□□ -0.11
RFC2-211ENST00000494019 ANKARQ7Z5J8 1434 aa14.33□□□□□ -0.11
RFC2-211ENST00000494019 ATP7BP35670 1465 aa14.33□□□□□ -0.12
RFC2-211ENST00000494019 BRINP3Q76B58 766 aa14.33□□□□□ -0.12
RFC2-211ENST00000494019 HSPA1LP34931 641 aa14.32□□□□□ -0.12
RFC2-211ENST00000494019 USP47Q96K76 1375 aa14.32□□□□□ -0.12
RFC2-211ENST00000494019 SHPRHQ149N8 1683 aa14.31□□□□□ -0.12
RFC2-211ENST00000494019 WASLO00401 505 aaPredicted RBP14.31□□□□□ -0.12
RFC2-211ENST00000494019 ORAI2Q96SN7 254 aa14.31□□□□□ -0.12
RFC2-211ENST00000494019 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
RFC2-211ENST00000494019 ESCO1Q5FWF5 840 aa14.3□□□□□ -0.12
RFC2-211ENST00000494019 PRR36Q9H6K5 1346 aa14.29□□□□□ -0.12
RFC2-211ENST00000494019 AKAP12Q02952 1782 aa14.28□□□□□ -0.12
RFC2-211ENST00000494019 CDK19Q9BWU1 502 aa14.28□□□□□ -0.12
RFC2-211ENST00000494019 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.12
RFC2-211ENST00000494019 EVC2Q86UK5 1308 aa14.27□□□□□ -0.12
RFC2-211ENST00000494019 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.13
RFC2-211ENST00000494019 DDX17Q92841 729 aaKnown RBP14.27□□□□□ -0.13
RFC2-211ENST00000494019 PXDNQ92626 1479 aa14.26□□□□□ -0.13
RFC2-211ENST00000494019 ST20-MTHFSA0A0A6YYL1 179 aa14.26□□□□□ -0.13
RFC2-211ENST00000494019 NPHP3Q7Z494 1330 aa14.25□□□□□ -0.13
RFC2-211ENST00000494019 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
RFC2-211ENST00000494019 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
RFC2-211ENST00000494019 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
RFC2-211ENST00000494019 NUDT16Q96DE0 195 aaKnown RBP14.24□□□□□ -0.13
RFC2-211ENST00000494019 MON2Q7Z3U7 1717 aa14.24□□□□□ -0.13
RFC2-211ENST00000494019 ALS2Q96Q42 1657 aa14.23□□□□□ -0.13
RFC2-211ENST00000494019 COL22A1Q8NFW1 1626 aaPredicted RBP14.23□□□□□ -0.13
RFC2-211ENST00000494019 FOXO3O43524 673 aa14.23□□□□□ -0.13
RFC2-211ENST00000494019 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
RFC2-211ENST00000494019 ABCA3Q99758 1704 aa14.23□□□□□ -0.13
RFC2-211ENST00000494019 MYOM1P52179 1685 aa14.23□□□□□ -0.13
RFC2-211ENST00000494019 XPCQ01831 940 aaPredicted RBP14.22□□□□□ -0.13
RFC2-211ENST00000494019 TESK2Q96S53 571 aa14.22□□□□□ -0.13
RFC2-211ENST00000494019 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
RFC2-211ENST00000494019 ATAD2Q6PL18 1390 aa14.22□□□□□ -0.13
RFC2-211ENST00000494019 JCADQ9P266 1359 aa14.22□□□□□ -0.13
RFC2-211ENST00000494019 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.13
RFC2-211ENST00000494019 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
RFC2-211ENST00000494019 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
RFC2-211ENST00000494019 NRKQ7Z2Y5 1582 aa14.21□□□□□ -0.14
RFC2-211ENST00000494019 DISP3Q9P2K9 1392 aa14.21□□□□□ -0.14
RFC2-211ENST00000494019 EIF4G2P78344 907 aaKnown RBP eCLIP14.2□□□□□ -0.14
RFC2-211ENST00000494019 CRYBG1Q9Y4K1 1723 aa14.19□□□□□ -0.14
RFC2-211ENST00000494019 TNS3Q68CZ2 1445 aa14.19□□□□□ -0.14
RFC2-211ENST00000494019 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
RFC2-211ENST00000494019 POLR3AO14802 1390 aaPredicted RBP14.19□□□□□ -0.14
RFC2-211ENST00000494019 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
RFC2-211ENST00000494019 HSPA5P11021 654 aaKnown RBP14.18□□□□□ -0.14
RFC2-211ENST00000494019 TMF1P82094 1093 aa14.18□□□□□ -0.14
RFC2-211ENST00000494019 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
RFC2-211ENST00000494019 PNPLA6Q8IY17 1366 aa14.18□□□□□ -0.14
RFC2-211ENST00000494019 PHRF1Q9P1Y6 1649 aaKnown RBP14.17□□□□□ -0.14
RFC2-211ENST00000494019 PSME1Q06323 249 aa14.17□□□□□ -0.14
RFC2-211ENST00000494019 KRT28Q7Z3Y7 464 aa14.17□□□□□ -0.14
RFC2-211ENST00000494019 ACEP12821 1306 aa14.16□□□□□ -0.14
RFC2-211ENST00000494019 PLEKHG3A1L390 1219 aa14.16□□□□□ -0.14
RFC2-211ENST00000494019 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
RFC2-211ENST00000494019 LRP6O75581 1613 aa14.15□□□□□ -0.14
RFC2-211ENST00000494019 PIK3C2AO00443 1686 aa14.15□□□□□ -0.14
RFC2-211ENST00000494019 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
RFC2-211ENST00000494019 USP6P35125 1406 aa14.15□□□□□ -0.14
RFC2-211ENST00000494019 SPATA31A3Q5VYP0 1347 aa14.15□□□□□ -0.15
RFC2-211ENST00000494019 SPATA31A6Q5VVP1 1343 aa14.14□□□□□ -0.15
RFC2-211ENST00000494019 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
RFC2-211ENST00000494019 CD163L1Q9NR16 1453 aa14.13□□□□□ -0.15
RFC2-211ENST00000494019 NINLQ9Y2I6 1382 aa14.13□□□□□ -0.15
RFC2-211ENST00000494019 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms