RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 A0A0G2JS52 829 aa15.28■□□□□ 0.04
NR1H3-225ENST00000494018 MYT1Q01538 1121 aa15.28■□□□□ 0.04
NR1H3-225ENST00000494018 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
NR1H3-225ENST00000494018 FAM182BQ5T319 152 aa15.27■□□□□ 0.04
NR1H3-225ENST00000494018 KRT27Q7Z3Y8 459 aa15.27■□□□□ 0.04
NR1H3-225ENST00000494018 LAMC1P11047 1609 aa15.27■□□□□ 0.03
NR1H3-225ENST00000494018 DAPK1P53355 1430 aa15.26■□□□□ 0.03
NR1H3-225ENST00000494018 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.26■□□□□ 0.03
NR1H3-225ENST00000494018 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
NR1H3-225ENST00000494018 SPHKAPQ2M3C7 1700 aa15.24■□□□□ 0.03
NR1H3-225ENST00000494018 RPRD2Q5VT52 1461 aaKnown RBP15.24■□□□□ 0.03
NR1H3-225ENST00000494018 PTPN23Q9H3S7 1636 aa15.24■□□□□ 0.03
NR1H3-225ENST00000494018 ESCO1Q5FWF5 840 aa15.23■□□□□ 0.03
NR1H3-225ENST00000494018 FOXO3O43524 673 aa15.22■□□□□ 0.03
NR1H3-225ENST00000494018 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
NR1H3-225ENST00000494018 EZH2Q15910 746 aaKnown RBP15.21■□□□□ 0.03
NR1H3-225ENST00000494018 E9PCH4 1651 aa15.21■□□□□ 0.03
NR1H3-225ENST00000494018 SLIT2O94813 1529 aa15.21■□□□□ 0.03
NR1H3-225ENST00000494018 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
NR1H3-225ENST00000494018 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
NR1H3-225ENST00000494018 PXDNQ92626 1479 aa15.18■□□□□ 0.02
NR1H3-225ENST00000494018 VPS72Q15906 364 aa15.17■□□□□ 0.02
NR1H3-225ENST00000494018 FAM98CQ17RN3 349 aaKnown RBP15.17■□□□□ 0.02
NR1H3-225ENST00000494018 CABLES1Q8TDN4 633 aa15.17■□□□□ 0.02
NR1H3-225ENST00000494018 PPP1R1BQ9UD71 204 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-225ENST00000494018 NPHP3Q7Z494 1330 aa15.17■□□□□ 0.02
NR1H3-225ENST00000494018 ROBO2Q9HCK4 1378 aa15.16■□□□□ 0.02
NR1H3-225ENST00000494018 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
NR1H3-225ENST00000494018 HAP1P54257 671 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-225ENST00000494018 ZNF784Q8NCA9 323 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-225ENST00000494018 RGPD1P0DJD0 1748 aa15.15■□□□□ 0.02
NR1H3-225ENST00000494018 PLCH1Q4KWH8 1693 aa15.14■□□□□ 0.01
NR1H3-225ENST00000494018 ONECUT3O60422 494 aaPredicted RBP15.14■□□□□ 0.01
NR1H3-225ENST00000494018 USP32Q8NFA0 1604 aa15.14■□□□□ 0.01
NR1H3-225ENST00000494018 ANKRD50Q9ULJ7 1429 aa15.13■□□□□ 0.01
NR1H3-225ENST00000494018 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
NR1H3-225ENST00000494018 TRIM37O94972 964 aa15.1■□□□□ 0.01
NR1H3-225ENST00000494018 C1QTNF8P60827 252 aa15.1■□□□□ 0.01
NR1H3-225ENST00000494018 ADGRL2O95490 1459 aa15.09■□□□□ 0.01
NR1H3-225ENST00000494018 UTRNP46939 3433 aa15.09■□□□□ 0.01
NR1H3-225ENST00000494018 CAMKK2Q96RR4 588 aa15.09■□□□□ 0.01
NR1H3-225ENST00000494018 IQGAP3Q86VI3 1631 aa15.08■□□□□ 0
NR1H3-225ENST00000494018 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0
NR1H3-225ENST00000494018 SPATA31A3Q5VYP0 1347 aa15.08■□□□□ 0
NR1H3-225ENST00000494018 FAM83GA6ND36 823 aa15.07■□□□□ 0
NR1H3-225ENST00000494018 APBA3O96018 575 aa15.07■□□□□ 0
NR1H3-225ENST00000494018 CEP350Q5VT06 3117 aa15.07■□□□□ 0
NR1H3-225ENST00000494018 NWD2Q9ULI1 1742 aa15.06■□□□□ 0
NR1H3-225ENST00000494018 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
NR1H3-225ENST00000494018 KRT28Q7Z3Y7 464 aa15.06■□□□□ 0
NR1H3-225ENST00000494018 SPON1Q9HCB6 807 aa15.06■□□□□ 0
NR1H3-225ENST00000494018 VPS8Q8N3P4 1428 aa15.06■□□□□ 0
NR1H3-225ENST00000494018 KCNQ2O43526 872 aa15.04■□□□□ -0
NR1H3-225ENST00000494018 NEXMIFQ5QGS0 1516 aa15.03■□□□□ -0
NR1H3-225ENST00000494018 DISP2A7MBM2 1401 aa15.03■□□□□ -0
NR1H3-225ENST00000494018 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
NR1H3-225ENST00000494018 BTG4Q9NY30 223 aa15.03■□□□□ -0
NR1H3-225ENST00000494018 NUP188Q5SRE5 1749 aa15.02□□□□□ -0.01
NR1H3-225ENST00000494018 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
NR1H3-225ENST00000494018 NRAPQ86VF7 1730 aa15.01□□□□□ -0.01
NR1H3-225ENST00000494018 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
NR1H3-225ENST00000494018 NBPF14Q5TI25 921 aa15.01□□□□□ -0.01
NR1H3-225ENST00000494018 WAPLQ7Z5K2 1190 aa15.01□□□□□ -0.01
NR1H3-225ENST00000494018 ABCA3Q99758 1704 aa15□□□□□ -0.01
NR1H3-225ENST00000494018 NUP155O75694 1391 aa15□□□□□ -0.01
NR1H3-225ENST00000494018 CDC42BPGQ6DT37 1551 aa15□□□□□ -0.01
NR1H3-225ENST00000494018 STK26Q9P289 416 aa15□□□□□ -0.01
NR1H3-225ENST00000494018 RGPD8O14715 1765 aaPredicted RBP15□□□□□ -0.01
NR1H3-225ENST00000494018 NAIPQ13075 1403 aa15□□□□□ -0.01
NR1H3-225ENST00000494018 RREB1Q92766 1687 aa15□□□□□ -0.01
NR1H3-225ENST00000494018 HFM1A2PYH4 1435 aa14.99□□□□□ -0.01
NR1H3-225ENST00000494018 ADGRB2O60241 1585 aa14.98□□□□□ -0.01
NR1H3-225ENST00000494018 CHD4Q14839 1912 aa14.98□□□□□ -0.01
NR1H3-225ENST00000494018 CLTCL1P53675 1640 aa14.96□□□□□ -0.01
NR1H3-225ENST00000494018 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
NR1H3-225ENST00000494018 TNS3Q68CZ2 1445 aa14.96□□□□□ -0.01
NR1H3-225ENST00000494018 PDGFDQ9GZP0 370 aaPredicted RBP14.96□□□□□ -0.01
NR1H3-225ENST00000494018 SPATA31A5Q5VU36 1347 aa14.95□□□□□ -0.02
NR1H3-225ENST00000494018 SPATA31A7Q8IWB4 1347 aa14.95□□□□□ -0.02
NR1H3-225ENST00000494018 NRKQ7Z2Y5 1582 aa14.95□□□□□ -0.02
NR1H3-225ENST00000494018 FAM196AQ6ZSG2 479 aa14.95□□□□□ -0.02
NR1H3-225ENST00000494018 THSD7AQ9UPZ6 1657 aa14.94□□□□□ -0.02
NR1H3-225ENST00000494018 PLEKHH1Q9ULM0 1364 aa14.94□□□□□ -0.02
NR1H3-225ENST00000494018 KIF1BO60333 1816 aa14.94□□□□□ -0.02
NR1H3-225ENST00000494018 ZBTB7AO95365 584 aa14.93□□□□□ -0.02
NR1H3-225ENST00000494018 MYOM1P52179 1685 aa14.93□□□□□ -0.02
NR1H3-225ENST00000494018 FMN2Q9NZ56 1722 aa14.92□□□□□ -0.02
NR1H3-225ENST00000494018 PSME1Q06323 249 aa14.92□□□□□ -0.02
NR1H3-225ENST00000494018 APLP2Q06481 763 aa14.92□□□□□ -0.02
NR1H3-225ENST00000494018 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
NR1H3-225ENST00000494018 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
NR1H3-225ENST00000494018 KIF1AQ12756 1690 aa14.92□□□□□ -0.02
NR1H3-225ENST00000494018 LOC105371045A0A1W2PR82 267 aa14.91□□□□□ -0.02
NR1H3-225ENST00000494018 VGFO15240 615 aaPredicted RBP14.91□□□□□ -0.02
NR1H3-225ENST00000494018 GIGYF1O75420 1035 aaPredicted RBP14.91□□□□□ -0.02
NR1H3-225ENST00000494018 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
NR1H3-225ENST00000494018 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
NR1H3-225ENST00000494018 STRN4Q9NRL3 753 aa14.9□□□□□ -0.02
NR1H3-225ENST00000494018 COL14A1Q05707 1796 aaKnown RBP14.89□□□□□ -0.03
NR1H3-225ENST00000494018 PMFBP1Q8TBY8 1022 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms