RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MINK1Q8N4C8 1332 aaPredicted RBP25.36■■□□□ 1.65
PDLIM7-208ENST00000493815 NALCNQ8IZF0 1738 aa25.36■■□□□ 1.65
PDLIM7-208ENST00000493815 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.36■■□□□ 1.65
PDLIM7-208ENST00000493815 UBAP1LF5GYI3 381 aa25.36■■□□□ 1.65
PDLIM7-208ENST00000493815 CENPJQ9HC77 1338 aaPredicted RBP25.33■■□□□ 1.65
PDLIM7-208ENST00000493815 ATF3P18847 181 aa25.32■■□□□ 1.64
PDLIM7-208ENST00000493815 NUTM2FA1L443 756 aa25.29■■□□□ 1.64
PDLIM7-208ENST00000493815 TOM1O60784 492 aa25.29■■□□□ 1.64
PDLIM7-208ENST00000493815 PIP4K2BP78356 416 aa25.29■■□□□ 1.64
PDLIM7-208ENST00000493815 CADPS2Q86UW7 1296 aa25.29■■□□□ 1.64
PDLIM7-208ENST00000493815 EIF3AQ14152 1382 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-208ENST00000493815 USP47Q96K76 1375 aa25.28■■□□□ 1.64
PDLIM7-208ENST00000493815 SCAF1Q9H7N4 1312 aaKnown RBP25.27■■□□□ 1.64
PDLIM7-208ENST00000493815 ST20-MTHFSA0A0A6YYL1 179 aa25.26■■□□□ 1.63
PDLIM7-208ENST00000493815 SLAIN2Q9P270 581 aa25.26■■□□□ 1.63
PDLIM7-208ENST00000493815 DCCP43146 1447 aa25.25■■□□□ 1.63
PDLIM7-208ENST00000493815 QRICH2Q9H0J4 1663 aa25.24■■□□□ 1.63
PDLIM7-208ENST00000493815 CDC42BPGQ6DT37 1551 aa25.23■■□□□ 1.63
PDLIM7-208ENST00000493815 MST1RQ04912 1400 aa25.22■■□□□ 1.63
PDLIM7-208ENST00000493815 WASLO00401 505 aaPredicted RBP25.21■■□□□ 1.63
PDLIM7-208ENST00000493815 ADGRB2O60241 1585 aa25.2■■□□□ 1.62
PDLIM7-208ENST00000493815 CDK19Q9BWU1 502 aa25.2■■□□□ 1.62
PDLIM7-208ENST00000493815 FBXO41Q8TF61 875 aa25.19■■□□□ 1.62
PDLIM7-208ENST00000493815 C1orf167Q5SNV9 1468 aa25.17■■□□□ 1.62
PDLIM7-208ENST00000493815 TESK2Q96S53 571 aa25.17■■□□□ 1.62
PDLIM7-208ENST00000493815 HSPA5P11021 654 aaKnown RBP25.17■■□□□ 1.62
PDLIM7-208ENST00000493815 EIF4G2P78344 907 aaKnown RBP eCLIP25.17■■□□□ 1.62
PDLIM7-208ENST00000493815 ORAI2Q96SN7 254 aa25.17■■□□□ 1.62
PDLIM7-208ENST00000493815 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
PDLIM7-208ENST00000493815 FMN2Q9NZ56 1722 aa25.15■■□□□ 1.62
PDLIM7-208ENST00000493815 TULP4Q9NRJ4 1543 aa25.15■■□□□ 1.62
PDLIM7-208ENST00000493815 SRPK2P78362 688 aaKnown RBP25.15■■□□□ 1.62
PDLIM7-208ENST00000493815 PRR36Q9H6K5 1346 aa25.15■■□□□ 1.62
PDLIM7-208ENST00000493815 ESCO1Q5FWF5 840 aa25.14■■□□□ 1.62
PDLIM7-208ENST00000493815 BRINP3Q76B58 766 aa25.14■■□□□ 1.62
PDLIM7-208ENST00000493815 EVC2Q86UK5 1308 aa25.13■■□□□ 1.61
PDLIM7-208ENST00000493815 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
PDLIM7-208ENST00000493815 SBNO2Q9Y2G9 1366 aa25.12■■□□□ 1.61
PDLIM7-208ENST00000493815 ROBO1Q9Y6N7 1651 aa25.11■■□□□ 1.61
PDLIM7-208ENST00000493815 DDX17Q92841 729 aaKnown RBP25.1■■□□□ 1.61
PDLIM7-208ENST00000493815 NUDT16Q96DE0 195 aaKnown RBP25.1■■□□□ 1.61
PDLIM7-208ENST00000493815 USP32Q8NFA0 1604 aa25.1■■□□□ 1.61
PDLIM7-208ENST00000493815 RGPD8O14715 1765 aaPredicted RBP25.09■■□□□ 1.61
PDLIM7-208ENST00000493815 ANKARQ7Z5J8 1434 aa25.08■■□□□ 1.6
PDLIM7-208ENST00000493815 ATP7BP35670 1465 aa25.08■■□□□ 1.6
PDLIM7-208ENST00000493815 PMFBP1Q8TBY8 1022 aa25.07■■□□□ 1.6
PDLIM7-208ENST00000493815 DISP3Q9P2K9 1392 aa25.07■■□□□ 1.6
PDLIM7-208ENST00000493815 ILDR1Q86SU0 546 aaPredicted RBP25.05■■□□□ 1.6
PDLIM7-208ENST00000493815 FOXO3O43524 673 aa25.04■■□□□ 1.6
PDLIM7-208ENST00000493815 TMF1P82094 1093 aa25.04■■□□□ 1.6
PDLIM7-208ENST00000493815 PHF8Q9UPP1 1060 aa25.04■■□□□ 1.6
PDLIM7-208ENST00000493815 HSPA1LP34931 641 aa25.04■■□□□ 1.6
PDLIM7-208ENST00000493815 CCDC61Q9Y6R9 512 aa25.03■■□□□ 1.6
PDLIM7-208ENST00000493815 XPCQ01831 940 aaPredicted RBP25.02■■□□□ 1.6
PDLIM7-208ENST00000493815 CABP1Q9NZU7 370 aa25.01■■□□□ 1.59
PDLIM7-208ENST00000493815 PPIP5K1Q6PFW1 1433 aa25■■□□□ 1.59
PDLIM7-208ENST00000493815 SLC24A1O60721 1099 aa24.99■■□□□ 1.59
PDLIM7-208ENST00000493815 C11orf95C9JLR9 678 aaPredicted RBP24.97■■□□□ 1.59
PDLIM7-208ENST00000493815 NGDNQ8NEJ9 315 aaKnown RBP24.97■■□□□ 1.59
PDLIM7-208ENST00000493815 POLR3GLQ9BT43 218 aa24.97■■□□□ 1.59
PDLIM7-208ENST00000493815 ATAD2Q6PL18 1390 aa24.97■■□□□ 1.59
PDLIM7-208ENST00000493815 TMC1Q8TDI8 760 aa24.97■■□□□ 1.59
PDLIM7-208ENST00000493815 TOPAZ1Q8N9V7 1692 aa24.96■■□□□ 1.59
PDLIM7-208ENST00000493815 ACEP12821 1306 aa24.95■■□□□ 1.58
PDLIM7-208ENST00000493815 NPHP3Q7Z494 1330 aa24.95■■□□□ 1.58
PDLIM7-208ENST00000493815 PLEKHG3A1L390 1219 aa24.94■■□□□ 1.58
PDLIM7-208ENST00000493815 SLC12A5Q9H2X9 1139 aa24.94■■□□□ 1.58
PDLIM7-208ENST00000493815 ITSN1Q15811 1721 aa24.94■■□□□ 1.58
PDLIM7-208ENST00000493815 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
PDLIM7-208ENST00000493815 KIF1AQ12756 1690 aa24.94■■□□□ 1.58
PDLIM7-208ENST00000493815 PSME1Q06323 249 aa24.94■■□□□ 1.58
PDLIM7-208ENST00000493815 PHLPP1O60346 1717 aa24.94■■□□□ 1.58
PDLIM7-208ENST00000493815 NHSL1Q5SYE7 1610 aa24.93■■□□□ 1.58
PDLIM7-208ENST00000493815 CDCA8Q53HL2 280 aa24.92■■□□□ 1.58
PDLIM7-208ENST00000493815 KRT28Q7Z3Y7 464 aa24.92■■□□□ 1.58
PDLIM7-208ENST00000493815 PUS7Q96PZ0 661 aaKnown RBP24.92■■□□□ 1.58
PDLIM7-208ENST00000493815 SOS2Q07890 1332 aaPredicted RBP24.9■■□□□ 1.58
PDLIM7-208ENST00000493815 PXDNQ92626 1479 aa24.9■■□□□ 1.58
PDLIM7-208ENST00000493815 POLR3AO14802 1390 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-208ENST00000493815 COL16A1Q07092 1604 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-208ENST00000493815 KIF7Q2M1P5 1343 aa24.87■■□□□ 1.57
PDLIM7-208ENST00000493815 PAK3O75914 559 aaPredicted RBP24.85■■□□□ 1.57
PDLIM7-208ENST00000493815 LRRC59Q96AG4 307 aaKnown RBP24.85■■□□□ 1.57
PDLIM7-208ENST00000493815 CD163L1Q9NR16 1453 aa24.85■■□□□ 1.57
PDLIM7-208ENST00000493815 LMOD2Q6P5Q4 547 aa24.84■■□□□ 1.57
PDLIM7-208ENST00000493815 CPSF1Q10570 1443 aaKnown RBP24.82■■□□□ 1.56
PDLIM7-208ENST00000493815 WASHC2AQ641Q2 1341 aa24.82■■□□□ 1.56
PDLIM7-208ENST00000493815 PLEKHG5O94827 1062 aa24.81■■□□□ 1.56
PDLIM7-208ENST00000493815 A0A1W2PP64 1363 aa24.81■■□□□ 1.56
PDLIM7-208ENST00000493815 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
PDLIM7-208ENST00000493815 SPATA31A3Q5VYP0 1347 aa24.81■■□□□ 1.56
PDLIM7-208ENST00000493815 TERF2IPQ9NYB0 399 aa24.81■■□□□ 1.56
PDLIM7-208ENST00000493815 USP6P35125 1406 aa24.8■■□□□ 1.56
PDLIM7-208ENST00000493815 NINLQ9Y2I6 1382 aa24.8■■□□□ 1.56
PDLIM7-208ENST00000493815 HDGFL2Q7Z4V5 671 aaPredicted RBP24.8■■□□□ 1.56
PDLIM7-208ENST00000493815 MYOM1P52179 1685 aa24.79■■□□□ 1.56
PDLIM7-208ENST00000493815 ZNF692Q9BU19 519 aaPredicted RBP24.79■■□□□ 1.56
PDLIM7-208ENST00000493815 SBNO1A3KN83 1393 aa24.79■■□□□ 1.56
PDLIM7-208ENST00000493815 CCDC7Q96M83 1385 aa24.78■■□□□ 1.56
PDLIM7-208ENST00000493815 JCADQ9P266 1359 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms