RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 EIF3AQ14152 1382 aaKnown RBP11.48□□□□□ -0.57
ABCD4-216ENST00000493752 TRPM1Q7Z4N2 1603 aa11.48□□□□□ -0.57
ABCD4-216ENST00000493752 XRN1Q8IZH2 1706 aaKnown RBP11.48□□□□□ -0.57
ABCD4-216ENST00000493752 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
ABCD4-216ENST00000493752 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
ABCD4-216ENST00000493752 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
ABCD4-216ENST00000493752 STRCP1A6NGW2 1772 aa11.46□□□□□ -0.57
ABCD4-216ENST00000493752 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
ABCD4-216ENST00000493752 TOM1O60784 492 aa11.46□□□□□ -0.57
ABCD4-216ENST00000493752 ADGRL3Q9HAR2 1447 aa11.45□□□□□ -0.58
ABCD4-216ENST00000493752 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
ABCD4-216ENST00000493752 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
ABCD4-216ENST00000493752 USP47Q96K76 1375 aa11.44□□□□□ -0.58
ABCD4-216ENST00000493752 UBAP1LF5GYI3 381 aa11.44□□□□□ -0.58
ABCD4-216ENST00000493752 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-216ENST00000493752 HIRIP3Q9BW71 556 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-216ENST00000493752 SLAIN2Q9P270 581 aa11.44□□□□□ -0.58
ABCD4-216ENST00000493752 DCCP43146 1447 aa11.43□□□□□ -0.58
ABCD4-216ENST00000493752 TESK2Q96S53 571 aa11.43□□□□□ -0.58
ABCD4-216ENST00000493752 CDK19Q9BWU1 502 aa11.43□□□□□ -0.58
ABCD4-216ENST00000493752 SBNO2Q9Y2G9 1366 aa11.42□□□□□ -0.58
ABCD4-216ENST00000493752 HSPA5P11021 654 aaKnown RBP11.42□□□□□ -0.58
ABCD4-216ENST00000493752 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
ABCD4-216ENST00000493752 EVC2Q86UK5 1308 aa11.41□□□□□ -0.58
ABCD4-216ENST00000493752 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
ABCD4-216ENST00000493752 SRPK2P78362 688 aaKnown RBP11.39□□□□□ -0.59
ABCD4-216ENST00000493752 TMF1P82094 1093 aa11.39□□□□□ -0.59
ABCD4-216ENST00000493752 NUDT16Q96DE0 195 aaKnown RBP11.39□□□□□ -0.59
ABCD4-216ENST00000493752 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
ABCD4-216ENST00000493752 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
ABCD4-216ENST00000493752 PIP4K2BP78356 416 aa11.38□□□□□ -0.59
ABCD4-216ENST00000493752 CDCA8Q53HL2 280 aa11.38□□□□□ -0.59
ABCD4-216ENST00000493752 ESCO1Q5FWF5 840 aa11.38□□□□□ -0.59
ABCD4-216ENST00000493752 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
ABCD4-216ENST00000493752 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
ABCD4-216ENST00000493752 MST1RQ04912 1400 aa11.37□□□□□ -0.59
ABCD4-216ENST00000493752 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
ABCD4-216ENST00000493752 ARHGEF28Q8N1W1 1705 aaKnown RBP11.37□□□□□ -0.59
ABCD4-216ENST00000493752 C1orf167Q5SNV9 1468 aa11.37□□□□□ -0.59
ABCD4-216ENST00000493752 PRR36Q9H6K5 1346 aa11.36□□□□□ -0.59
ABCD4-216ENST00000493752 ANKARQ7Z5J8 1434 aa11.36□□□□□ -0.59
ABCD4-216ENST00000493752 BRINP3Q76B58 766 aa11.36□□□□□ -0.59
ABCD4-216ENST00000493752 XIRP1Q702N8 1843 aaKnown RBP11.36□□□□□ -0.59
ABCD4-216ENST00000493752 CDC42BPGQ6DT37 1551 aa11.36□□□□□ -0.59
ABCD4-216ENST00000493752 PLEKHG3A1L390 1219 aa11.35□□□□□ -0.59
ABCD4-216ENST00000493752 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
ABCD4-216ENST00000493752 ADGRB2O60241 1585 aa11.35□□□□□ -0.59
ABCD4-216ENST00000493752 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
ABCD4-216ENST00000493752 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
ABCD4-216ENST00000493752 NALCNQ8IZF0 1738 aa11.34□□□□□ -0.59
ABCD4-216ENST00000493752 ATAD2Q6PL18 1390 aa11.33□□□□□ -0.6
ABCD4-216ENST00000493752 FOXO3O43524 673 aa11.33□□□□□ -0.6
ABCD4-216ENST00000493752 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
ABCD4-216ENST00000493752 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
ABCD4-216ENST00000493752 C11orf95C9JLR9 678 aaPredicted RBP11.31□□□□□ -0.6
ABCD4-216ENST00000493752 PSME1Q06323 249 aa11.31□□□□□ -0.6
ABCD4-216ENST00000493752 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
ABCD4-216ENST00000493752 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
ABCD4-216ENST00000493752 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
ABCD4-216ENST00000493752 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
ABCD4-216ENST00000493752 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
ABCD4-216ENST00000493752 QRICH2Q9H0J4 1663 aa11.3□□□□□ -0.6
ABCD4-216ENST00000493752 ATP7BP35670 1465 aa11.3□□□□□ -0.6
ABCD4-216ENST00000493752 ACEP12821 1306 aa11.3□□□□□ -0.6
ABCD4-216ENST00000493752 NINLQ9Y2I6 1382 aa11.29□□□□□ -0.6
ABCD4-216ENST00000493752 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
ABCD4-216ENST00000493752 KRT28Q7Z3Y7 464 aa11.29□□□□□ -0.6
ABCD4-216ENST00000493752 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
ABCD4-216ENST00000493752 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
ABCD4-216ENST00000493752 TERF2IPQ9NYB0 399 aa11.29□□□□□ -0.6
ABCD4-216ENST00000493752 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
ABCD4-216ENST00000493752 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
ABCD4-216ENST00000493752 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-216ENST00000493752 HSPA1LP34931 641 aa11.28□□□□□ -0.6
ABCD4-216ENST00000493752 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
ABCD4-216ENST00000493752 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
ABCD4-216ENST00000493752 HDGFL2Q7Z4V5 671 aaPredicted RBP11.27□□□□□ -0.61
ABCD4-216ENST00000493752 POLR3GLQ9BT43 218 aa11.27□□□□□ -0.61
ABCD4-216ENST00000493752 XPCQ01831 940 aaPredicted RBP11.26□□□□□ -0.61
ABCD4-216ENST00000493752 WASHC2AQ641Q2 1341 aa11.26□□□□□ -0.61
ABCD4-216ENST00000493752 USP32Q8NFA0 1604 aa11.25□□□□□ -0.61
ABCD4-216ENST00000493752 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
ABCD4-216ENST00000493752 CCDC7Q96M83 1385 aa11.25□□□□□ -0.61
ABCD4-216ENST00000493752 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
ABCD4-216ENST00000493752 ROBO1Q9Y6N7 1651 aa11.24□□□□□ -0.61
ABCD4-216ENST00000493752 SBNO1A3KN83 1393 aa11.24□□□□□ -0.61
ABCD4-216ENST00000493752 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
ABCD4-216ENST00000493752 SPATA31A3Q5VYP0 1347 aa11.23□□□□□ -0.61
ABCD4-216ENST00000493752 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
ABCD4-216ENST00000493752 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
ABCD4-216ENST00000493752 AHDC1Q5TGY3 1603 aaPredicted RBP11.22□□□□□ -0.61
ABCD4-216ENST00000493752 PXDNQ92626 1479 aa11.22□□□□□ -0.61
ABCD4-216ENST00000493752 CARD14Q9BXL6 1004 aa11.22□□□□□ -0.61
ABCD4-216ENST00000493752 PANK3Q9H999 370 aa11.22□□□□□ -0.61
ABCD4-216ENST00000493752 KIF1AQ12756 1690 aa11.21□□□□□ -0.61
ABCD4-216ENST00000493752 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.61
ABCD4-216ENST00000493752 USP6P35125 1406 aa11.21□□□□□ -0.61
ABCD4-216ENST00000493752 SSH2Q76I76 1423 aa11.21□□□□□ -0.61
ABCD4-216ENST00000493752 A0A1W2PP64 1363 aa11.21□□□□□ -0.61
ABCD4-216ENST00000493752 TTC21BQ7Z4L5 1316 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms