RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 USP47Q96K76 1375 aa17.16■□□□□ 0.34
RHBDF1-211ENST00000493647 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
RHBDF1-211ENST00000493647 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
RHBDF1-211ENST00000493647 MSH6P52701 1360 aa17.15■□□□□ 0.34
RHBDF1-211ENST00000493647 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
RHBDF1-211ENST00000493647 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
RHBDF1-211ENST00000493647 ST20-MTHFSA0A0A6YYL1 179 aa17.13■□□□□ 0.33
RHBDF1-211ENST00000493647 DCCP43146 1447 aa17.13■□□□□ 0.33
RHBDF1-211ENST00000493647 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
RHBDF1-211ENST00000493647 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
RHBDF1-211ENST00000493647 CDC42BPGQ6DT37 1551 aa17.11■□□□□ 0.33
RHBDF1-211ENST00000493647 TESK2Q96S53 571 aa17.11■□□□□ 0.33
RHBDF1-211ENST00000493647 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
RHBDF1-211ENST00000493647 HSPA5P11021 654 aaKnown RBP17.1■□□□□ 0.33
RHBDF1-211ENST00000493647 ATF3P18847 181 aa17.09■□□□□ 0.33
RHBDF1-211ENST00000493647 SBNO2Q9Y2G9 1366 aa17.09■□□□□ 0.33
RHBDF1-211ENST00000493647 MST1RQ04912 1400 aa17.09■□□□□ 0.33
RHBDF1-211ENST00000493647 TULP4Q9NRJ4 1543 aa17.09■□□□□ 0.33
RHBDF1-211ENST00000493647 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
RHBDF1-211ENST00000493647 EIF4G2P78344 907 aaKnown RBP eCLIP17.08■□□□□ 0.32
RHBDF1-211ENST00000493647 CADPS2Q86UW7 1296 aa17.08■□□□□ 0.32
RHBDF1-211ENST00000493647 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
RHBDF1-211ENST00000493647 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
RHBDF1-211ENST00000493647 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
RHBDF1-211ENST00000493647 CDK19Q9BWU1 502 aa17.06■□□□□ 0.32
RHBDF1-211ENST00000493647 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
RHBDF1-211ENST00000493647 FMN2Q9NZ56 1722 aa17.05■□□□□ 0.32
RHBDF1-211ENST00000493647 SLAIN2Q9P270 581 aa17.05■□□□□ 0.32
RHBDF1-211ENST00000493647 TOM1O60784 492 aa17.04■□□□□ 0.32
RHBDF1-211ENST00000493647 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
RHBDF1-211ENST00000493647 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
RHBDF1-211ENST00000493647 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
RHBDF1-211ENST00000493647 EVC2Q86UK5 1308 aa17.02■□□□□ 0.32
RHBDF1-211ENST00000493647 ATP7BP35670 1465 aa17.02■□□□□ 0.32
RHBDF1-211ENST00000493647 ORAI2Q96SN7 254 aa17.02■□□□□ 0.32
RHBDF1-211ENST00000493647 ANKARQ7Z5J8 1434 aa17.02■□□□□ 0.31
RHBDF1-211ENST00000493647 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
RHBDF1-211ENST00000493647 SRPK2P78362 688 aaKnown RBP17■□□□□ 0.31
RHBDF1-211ENST00000493647 BRINP3Q76B58 766 aa17■□□□□ 0.31
RHBDF1-211ENST00000493647 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
RHBDF1-211ENST00000493647 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
RHBDF1-211ENST00000493647 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
RHBDF1-211ENST00000493647 TMF1P82094 1093 aa16.97■□□□□ 0.31
RHBDF1-211ENST00000493647 ESCO1Q5FWF5 840 aa16.97■□□□□ 0.31
RHBDF1-211ENST00000493647 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
RHBDF1-211ENST00000493647 ROBO1Q9Y6N7 1651 aa16.96■□□□□ 0.31
RHBDF1-211ENST00000493647 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
RHBDF1-211ENST00000493647 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
RHBDF1-211ENST00000493647 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
RHBDF1-211ENST00000493647 TOPAZ1Q8N9V7 1692 aa16.94■□□□□ 0.3
RHBDF1-211ENST00000493647 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
RHBDF1-211ENST00000493647 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
RHBDF1-211ENST00000493647 PHF8Q9UPP1 1060 aa16.94■□□□□ 0.3
RHBDF1-211ENST00000493647 RGPD8O14715 1765 aaPredicted RBP16.94■□□□□ 0.3
RHBDF1-211ENST00000493647 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
RHBDF1-211ENST00000493647 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
RHBDF1-211ENST00000493647 PPIP5K1Q6PFW1 1433 aa16.93■□□□□ 0.3
RHBDF1-211ENST00000493647 PLEKHG3A1L390 1219 aa16.92■□□□□ 0.3
RHBDF1-211ENST00000493647 FOXO3O43524 673 aa16.91■□□□□ 0.3
RHBDF1-211ENST00000493647 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
RHBDF1-211ENST00000493647 KIF7Q2M1P5 1343 aa16.9■□□□□ 0.3
RHBDF1-211ENST00000493647 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.3
RHBDF1-211ENST00000493647 AHDC1Q5TGY3 1603 aaPredicted RBP16.89■□□□□ 0.29
RHBDF1-211ENST00000493647 KIF1AQ12756 1690 aa16.89■□□□□ 0.29
RHBDF1-211ENST00000493647 XPCQ01831 940 aaPredicted RBP16.89■□□□□ 0.29
RHBDF1-211ENST00000493647 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
RHBDF1-211ENST00000493647 ACEP12821 1306 aa16.89■□□□□ 0.29
RHBDF1-211ENST00000493647 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
RHBDF1-211ENST00000493647 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
RHBDF1-211ENST00000493647 ITSN1Q15811 1721 aa16.88■□□□□ 0.29
RHBDF1-211ENST00000493647 HSPA1LP34931 641 aa16.88■□□□□ 0.29
RHBDF1-211ENST00000493647 PXDNQ92626 1479 aa16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 POLR3GLQ9BT43 218 aa16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 SOS2Q07890 1332 aaPredicted RBP16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 NPHP3Q7Z494 1330 aa16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 CCDC7Q96M83 1385 aa16.87■□□□□ 0.29
RHBDF1-211ENST00000493647 CPSF1Q10570 1443 aaKnown RBP16.86■□□□□ 0.29
RHBDF1-211ENST00000493647 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
RHBDF1-211ENST00000493647 COL16A1Q07092 1604 aaPredicted RBP16.85■□□□□ 0.29
RHBDF1-211ENST00000493647 MYOM1P52179 1685 aa16.85■□□□□ 0.29
RHBDF1-211ENST00000493647 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
RHBDF1-211ENST00000493647 A0A1W2PP64 1363 aa16.83■□□□□ 0.28
RHBDF1-211ENST00000493647 PSME1Q06323 249 aa16.83■□□□□ 0.28
RHBDF1-211ENST00000493647 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
RHBDF1-211ENST00000493647 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
RHBDF1-211ENST00000493647 USP6P35125 1406 aa16.82■□□□□ 0.28
RHBDF1-211ENST00000493647 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
RHBDF1-211ENST00000493647 SBNO1A3KN83 1393 aa16.8■□□□□ 0.28
RHBDF1-211ENST00000493647 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
RHBDF1-211ENST00000493647 ANKRD36BQ8N2N9 1353 aa16.8■□□□□ 0.28
RHBDF1-211ENST00000493647 SPATA31A3Q5VYP0 1347 aa16.8■□□□□ 0.28
RHBDF1-211ENST00000493647 TRPM3Q9HCF6 1732 aaPredicted RBP16.8■□□□□ 0.28
RHBDF1-211ENST00000493647 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
RHBDF1-211ENST00000493647 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
RHBDF1-211ENST00000493647 ZNF692Q9BU19 519 aaPredicted RBP16.79■□□□□ 0.28
RHBDF1-211ENST00000493647 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
RHBDF1-211ENST00000493647 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms