RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 PLCH2O75038 1416 aa19.77■□□□□ 0.76
CACUL1-206ENST00000493518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.75
CACUL1-206ENST00000493518 C22orf23Q9BZE7 217 aa19.77■□□□□ 0.75
CACUL1-206ENST00000493518 NOS1P29475 1434 aa19.77■□□□□ 0.75
CACUL1-206ENST00000493518 SSH1Q8WYL5 1049 aa19.76■□□□□ 0.75
CACUL1-206ENST00000493518 MYH16Q9H6N6 1097 aa19.76■□□□□ 0.75
CACUL1-206ENST00000493518 NOB1Q9ULX3 412 aaKnown RBP19.76■□□□□ 0.75
CACUL1-206ENST00000493518 MAST1Q9Y2H9 1570 aa19.76■□□□□ 0.75
CACUL1-206ENST00000493518 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
CACUL1-206ENST00000493518 INSRP06213 1382 aa19.75■□□□□ 0.75
CACUL1-206ENST00000493518 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
CACUL1-206ENST00000493518 TRIM27P14373 513 aa19.74■□□□□ 0.75
CACUL1-206ENST00000493518 APBB1O00213 710 aa19.74■□□□□ 0.75
CACUL1-206ENST00000493518 TBC1D32Q96NH3 1257 aa19.74■□□□□ 0.75
CACUL1-206ENST00000493518 ERVK-7P63135 1459 aa19.74■□□□□ 0.75
CACUL1-206ENST00000493518 RIPK4P57078 832 aa19.73■□□□□ 0.75
CACUL1-206ENST00000493518 HMOX1P09601 288 aa19.72■□□□□ 0.75
CACUL1-206ENST00000493518 TMEM57Q8N5G2 664 aa19.72■□□□□ 0.75
CACUL1-206ENST00000493518 RRAGDQ9NQL2 400 aaPredicted RBP19.71■□□□□ 0.75
CACUL1-206ENST00000493518 UNC13BO14795 1591 aa19.71■□□□□ 0.75
CACUL1-206ENST00000493518 IQGAP3Q86VI3 1631 aa19.7■□□□□ 0.74
CACUL1-206ENST00000493518 NAP1L5Q96NT1 182 aaPredicted RBP19.7■□□□□ 0.74
CACUL1-206ENST00000493518 GOLGA6L3A6NEY3 463 aa19.69■□□□□ 0.74
CACUL1-206ENST00000493518 HSCBQ8IWL3 235 aa19.68■□□□□ 0.74
CACUL1-206ENST00000493518 ANKRD45Q5TZF3 282 aa19.68■□□□□ 0.74
CACUL1-206ENST00000493518 MADDQ8WXG6 1647 aa19.68■□□□□ 0.74
CACUL1-206ENST00000493518 HSP90AB1P08238 724 aaKnown RBP19.67■□□□□ 0.74
CACUL1-206ENST00000493518 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
CACUL1-206ENST00000493518 CLTCL1P53675 1640 aa19.67■□□□□ 0.74
CACUL1-206ENST00000493518 MCM4P33991 863 aa19.66■□□□□ 0.74
CACUL1-206ENST00000493518 TMPOP42166 694 aaKnown RBP19.66■□□□□ 0.74
CACUL1-206ENST00000493518 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
CACUL1-206ENST00000493518 XRCC6P12956 609 aaKnown RBP eCLIP19.66■□□□□ 0.74
CACUL1-206ENST00000493518 ANTXR1Q9H6X2 564 aa19.66■□□□□ 0.74
CACUL1-206ENST00000493518 POLR3AO14802 1390 aaPredicted RBP19.66■□□□□ 0.74
CACUL1-206ENST00000493518 TRAK2O60296 914 aa19.66■□□□□ 0.74
CACUL1-206ENST00000493518 SOX12O15370 315 aa19.64■□□□□ 0.74
CACUL1-206ENST00000493518 RBM42Q9BTD8 480 aaKnown RBP19.64■□□□□ 0.74
CACUL1-206ENST00000493518 ATF7IPQ6VMQ6 1270 aa19.64■□□□□ 0.73
CACUL1-206ENST00000493518 STAG3Q9UJ98 1225 aa19.64■□□□□ 0.73
CACUL1-206ENST00000493518 SYNMO15061 1565 aa19.64■□□□□ 0.73
CACUL1-206ENST00000493518 EVC2Q86UK5 1308 aa19.64■□□□□ 0.73
CACUL1-206ENST00000493518 PTPRTO14522 1441 aa19.64■□□□□ 0.73
CACUL1-206ENST00000493518 ABCC2Q92887 1545 aa19.61■□□□□ 0.73
CACUL1-206ENST00000493518 C14orf93Q9H972 538 aaKnown RBP19.61■□□□□ 0.73
CACUL1-206ENST00000493518 NPC1L1Q9UHC9 1359 aa19.61■□□□□ 0.73
CACUL1-206ENST00000493518 FANCAO15360 1455 aa19.61■□□□□ 0.73
CACUL1-206ENST00000493518 L1TD1Q5T7N2 865 aaKnown RBP19.61■□□□□ 0.73
CACUL1-206ENST00000493518 DDX19BQ9UMR2 479 aa19.61■□□□□ 0.73
CACUL1-206ENST00000493518 TPRNQ4KMQ1 711 aa19.61■□□□□ 0.73
CACUL1-206ENST00000493518 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
CACUL1-206ENST00000493518 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
CACUL1-206ENST00000493518 STAC3Q96MF2 364 aa19.6■□□□□ 0.73
CACUL1-206ENST00000493518 PRAM1Q96QH2 718 aa19.6■□□□□ 0.73
CACUL1-206ENST00000493518 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
CACUL1-206ENST00000493518 NCLP19338 710 aaKnown RBP19.6■□□□□ 0.73
CACUL1-206ENST00000493518 CHMP5Q9NZZ3 219 aa19.6■□□□□ 0.73
CACUL1-206ENST00000493518 NPM1P06748 294 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACUL1-206ENST00000493518 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
CACUL1-206ENST00000493518 ADGRL1O94910 1474 aa19.59■□□□□ 0.73
CACUL1-206ENST00000493518 NUTM2FA1L443 756 aa19.58■□□□□ 0.73
CACUL1-206ENST00000493518 NGEFQ8N5V2 710 aa19.58■□□□□ 0.73
CACUL1-206ENST00000493518 CABP1Q9NZU7 370 aa19.58■□□□□ 0.73
CACUL1-206ENST00000493518 KDM5AP29375 1690 aaKnown RBP19.58■□□□□ 0.72
CACUL1-206ENST00000493518 DIAPH1O60610 1272 aaKnown RBP19.57■□□□□ 0.72
CACUL1-206ENST00000493518 DCTN1Q14203 1278 aa19.57■□□□□ 0.72
CACUL1-206ENST00000493518 TRPM2O94759 1503 aa19.57■□□□□ 0.72
CACUL1-206ENST00000493518 FOXD4L5Q5VV16 416 aaPredicted RBP19.57■□□□□ 0.72
CACUL1-206ENST00000493518 TSPYL6Q8N831 410 aa19.57■□□□□ 0.72
CACUL1-206ENST00000493518 FOXD4L4Q8WXT5 416 aaPredicted RBP19.57■□□□□ 0.72
CACUL1-206ENST00000493518 ATAD2Q6PL18 1390 aa19.56■□□□□ 0.72
CACUL1-206ENST00000493518 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
CACUL1-206ENST00000493518 IQGAP1P46940 1657 aa19.55■□□□□ 0.72
CACUL1-206ENST00000493518 LAMC1P11047 1609 aa19.55■□□□□ 0.72
CACUL1-206ENST00000493518 ABCC1P33527 1531 aa19.55■□□□□ 0.72
CACUL1-206ENST00000493518 FYB1O15117 783 aa19.55■□□□□ 0.72
CACUL1-206ENST00000493518 RNF17Q9BXT8 1623 aaKnown RBP19.55■□□□□ 0.72
CACUL1-206ENST00000493518 ZBTB7CA1YPR0 619 aa19.55■□□□□ 0.72
CACUL1-206ENST00000493518 CD2BP2O95400 341 aaKnown RBP19.55■□□□□ 0.72
CACUL1-206ENST00000493518 IDI1Q13907 227 aa19.55■□□□□ 0.72
CACUL1-206ENST00000493518 PNNQ9H307 717 aaKnown RBP19.55■□□□□ 0.72
CACUL1-206ENST00000493518 CHD1O14646 1710 aa19.54■□□□□ 0.72
CACUL1-206ENST00000493518 MLECQ14165 292 aa19.54■□□□□ 0.72
CACUL1-206ENST00000493518 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
CACUL1-206ENST00000493518 FAM83GA6ND36 823 aa19.53■□□□□ 0.72
CACUL1-206ENST00000493518 WAPLQ7Z5K2 1190 aa19.53■□□□□ 0.72
CACUL1-206ENST00000493518 ZRANB1Q9UGI0 708 aa19.53■□□□□ 0.72
CACUL1-206ENST00000493518 MYOM1P52179 1685 aa19.53■□□□□ 0.72
CACUL1-206ENST00000493518 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
CACUL1-206ENST00000493518 VGFO15240 615 aaPredicted RBP19.52■□□□□ 0.72
CACUL1-206ENST00000493518 CHD1LQ86WJ1 897 aa19.52■□□□□ 0.72
CACUL1-206ENST00000493518 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
CACUL1-206ENST00000493518 NLRP1Q9C000 1473 aa19.52■□□□□ 0.71
CACUL1-206ENST00000493518 TNPO1Q92973 898 aaKnown RBP19.51■□□□□ 0.71
CACUL1-206ENST00000493518 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
CACUL1-206ENST00000493518 A0A1W2PP64 1363 aa19.51■□□□□ 0.71
CACUL1-206ENST00000493518 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
CACUL1-206ENST00000493518 FBXO31Q5XUX0 539 aaPredicted RBP19.5■□□□□ 0.71
CACUL1-206ENST00000493518 ZBTB40Q9NUA8 1239 aa19.5■□□□□ 0.71
CACUL1-206ENST00000493518 EMILIN1Q9Y6C2 1016 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms