RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
PRAME-213ENST00000492657 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
PRAME-213ENST00000492657 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
PRAME-213ENST00000492657 GLI2P10070 1586 aa16.9■□□□□ 0.3
PRAME-213ENST00000492657 MYO5BQ9ULV0 1848 aa16.9■□□□□ 0.3
PRAME-213ENST00000492657 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
PRAME-213ENST00000492657 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
PRAME-213ENST00000492657 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
PRAME-213ENST00000492657 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
PRAME-213ENST00000492657 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
PRAME-213ENST00000492657 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
PRAME-213ENST00000492657 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
PRAME-213ENST00000492657 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
PRAME-213ENST00000492657 ARHGEF28Q8N1W1 1705 aaKnown RBP16.86■□□□□ 0.29
PRAME-213ENST00000492657 MTHFSP49914 203 aa16.85■□□□□ 0.29
PRAME-213ENST00000492657 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
PRAME-213ENST00000492657 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
PRAME-213ENST00000492657 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
PRAME-213ENST00000492657 MLECQ14165 292 aa16.84■□□□□ 0.29
PRAME-213ENST00000492657 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
PRAME-213ENST00000492657 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
PRAME-213ENST00000492657 RIMBP3CA6NJZ7 1639 aa16.83■□□□□ 0.29
PRAME-213ENST00000492657 RIMBP3BA6NNM3 1639 aa16.83■□□□□ 0.29
PRAME-213ENST00000492657 RIMBP3Q9UFD9 1639 aa16.83■□□□□ 0.29
PRAME-213ENST00000492657 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
PRAME-213ENST00000492657 BCAR3O75815 825 aa16.83■□□□□ 0.28
PRAME-213ENST00000492657 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
PRAME-213ENST00000492657 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
PRAME-213ENST00000492657 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
PRAME-213ENST00000492657 NPM2Q86SE8 214 aaKnown RBP16.81■□□□□ 0.28
PRAME-213ENST00000492657 WWC1Q8IX03 1113 aa16.81■□□□□ 0.28
PRAME-213ENST00000492657 ZFYVE9O95405 1425 aa16.81■□□□□ 0.28
PRAME-213ENST00000492657 ANKRD36BQ8N2N9 1353 aa16.8■□□□□ 0.28
PRAME-213ENST00000492657 E9PSI1 815 aa16.8■□□□□ 0.28
PRAME-213ENST00000492657 POGKQ9P215 609 aa16.8■□□□□ 0.28
PRAME-213ENST00000492657 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
PRAME-213ENST00000492657 DIP2BQ9P265 1576 aa16.79■□□□□ 0.28
PRAME-213ENST00000492657 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
PRAME-213ENST00000492657 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
PRAME-213ENST00000492657 SHPRHQ149N8 1683 aa16.79■□□□□ 0.28
PRAME-213ENST00000492657 ANP32AP39687 249 aaKnown RBP16.78■□□□□ 0.28
PRAME-213ENST00000492657 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
PRAME-213ENST00000492657 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
PRAME-213ENST00000492657 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
PRAME-213ENST00000492657 A0A1W2PP64 1363 aa16.77■□□□□ 0.28
PRAME-213ENST00000492657 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.77■□□□□ 0.28
PRAME-213ENST00000492657 PDE4AP27815 886 aa16.77■□□□□ 0.27
PRAME-213ENST00000492657 PTPRMP28827 1452 aa16.76■□□□□ 0.27
PRAME-213ENST00000492657 YTHDC2Q9H6S0 1430 aaKnown RBP16.76■□□□□ 0.27
PRAME-213ENST00000492657 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.76■□□□□ 0.27
PRAME-213ENST00000492657 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
PRAME-213ENST00000492657 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
PRAME-213ENST00000492657 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.272e-24■□□□□ 8.6
PRAME-213ENST00000492657 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
PRAME-213ENST00000492657 WAPLQ7Z5K2 1190 aa16.74■□□□□ 0.27
PRAME-213ENST00000492657 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
PRAME-213ENST00000492657 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
PRAME-213ENST00000492657 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
PRAME-213ENST00000492657 CDK19Q9BWU1 502 aa16.74■□□□□ 0.27
PRAME-213ENST00000492657 RTL5Q5HYW3 569 aaPredicted RBP16.73■□□□□ 0.27
PRAME-213ENST00000492657 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
PRAME-213ENST00000492657 ALKQ9UM73 1620 aa16.73■□□□□ 0.27
PRAME-213ENST00000492657 FYB1O15117 783 aa16.72■□□□□ 0.27
PRAME-213ENST00000492657 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
PRAME-213ENST00000492657 CLTCQ00610 1675 aaKnown RBP16.72■□□□□ 0.27
PRAME-213ENST00000492657 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
PRAME-213ENST00000492657 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
PRAME-213ENST00000492657 ABCC11Q96J66 1382 aa16.71■□□□□ 0.27
PRAME-213ENST00000492657 MS4A1P11836 297 aa16.7■□□□□ 0.26
PRAME-213ENST00000492657 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
PRAME-213ENST00000492657 NSD2O96028 1365 aa16.7■□□□□ 0.26
PRAME-213ENST00000492657 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
PRAME-213ENST00000492657 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
PRAME-213ENST00000492657 TERF2IPQ9NYB0 399 aa16.69■□□□□ 0.26
PRAME-213ENST00000492657 FBLN1P23142 703 aa16.69■□□□□ 0.26
PRAME-213ENST00000492657 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
PRAME-213ENST00000492657 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
PRAME-213ENST00000492657 A2ML1A8K2U0 1454 aa16.68■□□□□ 0.26
PRAME-213ENST00000492657 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
PRAME-213ENST00000492657 CENPQQ7L2Z9 268 aaPredicted RBP16.68■□□□□ 0.26
PRAME-213ENST00000492657 FRAT1Q92837 279 aaPredicted RBP16.68■□□□□ 0.26
PRAME-213ENST00000492657 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
PRAME-213ENST00000492657 TNNQ9UQP3 1299 aa16.67■□□□□ 0.26
PRAME-213ENST00000492657 RIMS2Q9UQ26 1411 aa16.67■□□□□ 0.26
PRAME-213ENST00000492657 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
PRAME-213ENST00000492657 AGLP35573 1532 aa16.67■□□□□ 0.26
PRAME-213ENST00000492657 CANXP27824 592 aaKnown RBP16.66■□□□□ 0.26
PRAME-213ENST00000492657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRAME-213ENST00000492657 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
PRAME-213ENST00000492657 WDR63Q8IWG1 891 aa16.66■□□□□ 0.26
PRAME-213ENST00000492657 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
PRAME-213ENST00000492657 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
PRAME-213ENST00000492657 HDGFL2Q7Z4V5 671 aaPredicted RBP16.65■□□□□ 0.26
PRAME-213ENST00000492657 ARHGEF40Q8TER5 1519 aa16.65■□□□□ 0.26
PRAME-213ENST00000492657 IGHDP01880 384 aa16.64■□□□□ 0.25
PRAME-213ENST00000492657 RGS3P49796 1198 aa16.64■□□□□ 0.25
PRAME-213ENST00000492657 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
PRAME-213ENST00000492657 NLRP1Q9C000 1473 aa16.63■□□□□ 0.25
PRAME-213ENST00000492657 CCDC27Q2M243 656 aa16.63■□□□□ 0.25
PRAME-213ENST00000492657 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms