RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
TNFRSF9-203ENST00000492571 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
TNFRSF9-203ENST00000492571 ADAMTS13Q76LX8 1427 aa14.92□□□□□ -0.02
TNFRSF9-203ENST00000492571 CHD2O14647 1828 aaKnown RBP14.92□□□□□ -0.02
TNFRSF9-203ENST00000492571 RBM6P78332 1123 aaKnown RBP14.92□□□□□ -0.02
TNFRSF9-203ENST00000492571 PROM2Q8N271 834 aa14.92□□□□□ -0.02
TNFRSF9-203ENST00000492571 NGLY1Q96IV0 654 aa14.92□□□□□ -0.02
TNFRSF9-203ENST00000492571 C8orf37Q96NL8 207 aa14.92□□□□□ -0.02
TNFRSF9-203ENST00000492571 DIP2AQ14689 1571 aa14.91□□□□□ -0.02
TNFRSF9-203ENST00000492571 SETD1AO15047 1707 aaKnown RBP14.91□□□□□ -0.02
TNFRSF9-203ENST00000492571 TMEM131LA2VDJ0 1609 aa14.91□□□□□ -0.02
TNFRSF9-203ENST00000492571 AHDC1Q5TGY3 1603 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF9-203ENST00000492571 DCCP43146 1447 aa14.91□□□□□ -0.02
TNFRSF9-203ENST00000492571 CDK12Q9NYV4 1490 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF9-203ENST00000492571 NUP155O75694 1391 aa14.9□□□□□ -0.02
TNFRSF9-203ENST00000492571 TRPM2O94759 1503 aa14.9□□□□□ -0.02
TNFRSF9-203ENST00000492571 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
TNFRSF9-203ENST00000492571 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF9-203ENST00000492571 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
TNFRSF9-203ENST00000492571 ADAMTS2O95450 1211 aa14.86□□□□□ -0.03
TNFRSF9-203ENST00000492571 ITGAEP38570 1179 aa14.86□□□□□ -0.03
TNFRSF9-203ENST00000492571 SHPRHQ149N8 1683 aa14.86□□□□□ -0.03
TNFRSF9-203ENST00000492571 ROCK1Q13464 1354 aa14.85□□□□□ -0.03
TNFRSF9-203ENST00000492571 PTPRUQ92729 1446 aa14.84□□□□□ -0.03
TNFRSF9-203ENST00000492571 ASXL1Q8IXJ9 1541 aa14.84□□□□□ -0.03
TNFRSF9-203ENST00000492571 MST1RQ04912 1400 aa14.83□□□□□ -0.04
TNFRSF9-203ENST00000492571 DDX17Q92841 729 aaKnown RBP14.82□□□□□ -0.04
TNFRSF9-203ENST00000492571 USP21Q9UK80 565 aa14.82□□□□□ -0.04
TNFRSF9-203ENST00000492571 TRPC5Q9UL62 973 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF9-203ENST00000492571 ATAD2Q6PL18 1390 aa14.82□□□□□ -0.04
TNFRSF9-203ENST00000492571 MYO5BQ9ULV0 1848 aa14.81□□□□□ -0.04
TNFRSF9-203ENST00000492571 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
TNFRSF9-203ENST00000492571 METP08581 1390 aa14.81□□□□□ -0.04
TNFRSF9-203ENST00000492571 PNPLA6Q8IY17 1366 aa14.81□□□□□ -0.04
TNFRSF9-203ENST00000492571 UNC13BO14795 1591 aa14.81□□□□□ -0.04
TNFRSF9-203ENST00000492571 VGFO15240 615 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF9-203ENST00000492571 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF9-203ENST00000492571 ADGRL3Q9HAR2 1447 aa14.79□□□□□ -0.04
TNFRSF9-203ENST00000492571 E9PCH4 1651 aa14.78□□□□□ -0.04
TNFRSF9-203ENST00000492571 RGS12O14924 1447 aa14.78□□□□□ -0.04
TNFRSF9-203ENST00000492571 CCDC125Q86Z20 511 aa14.78□□□□□ -0.04
TNFRSF9-203ENST00000492571 IQGAP3Q86VI3 1631 aa14.77□□□□□ -0.05
TNFRSF9-203ENST00000492571 ORAI2Q96SN7 254 aa14.76□□□□□ -0.05
TNFRSF9-203ENST00000492571 SETBP1Q9Y6X0 1596 aa14.76□□□□□ -0.05
TNFRSF9-203ENST00000492571 SOS2Q07890 1332 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF9-203ENST00000492571 SRCAPQ6ZRS2 3230 aa14.75□□□□□ -0.05
TNFRSF9-203ENST00000492571 FNBP4Q8N3X1 1017 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF9-203ENST00000492571 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
TNFRSF9-203ENST00000492571 ESCO1Q5FWF5 840 aa14.73□□□□□ -0.05
TNFRSF9-203ENST00000492571 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
TNFRSF9-203ENST00000492571 NPHP3Q7Z494 1330 aa14.72□□□□□ -0.05
TNFRSF9-203ENST00000492571 NHSL1Q5SYE7 1610 aa14.72□□□□□ -0.05
TNFRSF9-203ENST00000492571 XRN1Q8IZH2 1706 aaKnown RBP14.72□□□□□ -0.05
TNFRSF9-203ENST00000492571 RPGRIP1LQ68CZ1 1315 aa14.71□□□□□ -0.05
TNFRSF9-203ENST00000492571 ZNF579Q8NAF0 562 aaKnown RBP14.7□□□□□ -0.06
TNFRSF9-203ENST00000492571 LRPPRCP42704 1394 aaKnown RBP14.7□□□□□ -0.06
TNFRSF9-203ENST00000492571 HFM1A2PYH4 1435 aa14.68□□□□□ -0.06
TNFRSF9-203ENST00000492571 NRXN3Q9Y4C0 1643 aa14.68□□□□□ -0.06
TNFRSF9-203ENST00000492571 FOXO3O43524 673 aa14.68□□□□□ -0.06
TNFRSF9-203ENST00000492571 SF3B2Q13435 895 aaKnown RBP14.68□□□□□ -0.06
TNFRSF9-203ENST00000492571 GJD4Q96KN9 370 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF9-203ENST00000492571 ROBO2Q9HCK4 1378 aa14.68□□□□□ -0.06
TNFRSF9-203ENST00000492571 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
TNFRSF9-203ENST00000492571 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF9-203ENST00000492571 ATRNO75882 1429 aa14.66□□□□□ -0.06
TNFRSF9-203ENST00000492571 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
TNFRSF9-203ENST00000492571 NEXMIFQ5QGS0 1516 aa14.65□□□□□ -0.06
TNFRSF9-203ENST00000492571 SPHKAPQ2M3C7 1700 aa14.64□□□□□ -0.07
TNFRSF9-203ENST00000492571 XPCQ01831 940 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF9-203ENST00000492571 UNC5CLQ8IV45 518 aa14.63□□□□□ -0.07
TNFRSF9-203ENST00000492571 NUTM2FA1L443 756 aa14.62□□□□□ -0.07
TNFRSF9-203ENST00000492571 NALCNQ8IZF0 1738 aa14.62□□□□□ -0.07
TNFRSF9-203ENST00000492571 STK26Q9P289 416 aa14.62□□□□□ -0.07
TNFRSF9-203ENST00000492571 CLCN6P51797 869 aa14.61□□□□□ -0.07
TNFRSF9-203ENST00000492571 PSME1Q06323 249 aa14.6□□□□□ -0.07
TNFRSF9-203ENST00000492571 FKBP8Q14318 412 aa14.6□□□□□ -0.07
TNFRSF9-203ENST00000492571 CCDC9Q9Y3X0 531 aaKnown RBP14.6□□□□□ -0.07
TNFRSF9-203ENST00000492571 BCL9LQ86UU0 1499 aa14.6□□□□□ -0.07
TNFRSF9-203ENST00000492571 CLTCL1P53675 1640 aa14.59□□□□□ -0.07
TNFRSF9-203ENST00000492571 MYOM2P54296 1465 aa14.59□□□□□ -0.07
TNFRSF9-203ENST00000492571 LAMC1P11047 1609 aa14.59□□□□□ -0.07
TNFRSF9-203ENST00000492571 BLMP54132 1417 aaPredicted RBP14.58□□□□□ -0.07
TNFRSF9-203ENST00000492571 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.07
TNFRSF9-203ENST00000492571 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
TNFRSF9-203ENST00000492571 WAPLQ7Z5K2 1190 aa14.58□□□□□ -0.08
TNFRSF9-203ENST00000492571 PHF12Q96QT6 1004 aa14.58□□□□□ -0.08
TNFRSF9-203ENST00000492571 RGL3Q3MIN7 710 aa14.57□□□□□ -0.08
TNFRSF9-203ENST00000492571 SPATA31A3Q5VYP0 1347 aa14.57□□□□□ -0.08
TNFRSF9-203ENST00000492571 KIF1BO60333 1816 aa14.57□□□□□ -0.08
TNFRSF9-203ENST00000492571 A0A0G2JS52 829 aa14.56□□□□□ -0.08
TNFRSF9-203ENST00000492571 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF9-203ENST00000492571 MYT1Q01538 1121 aa14.56□□□□□ -0.08
TNFRSF9-203ENST00000492571 LMOD2Q6P5Q4 547 aa14.56□□□□□ -0.08
TNFRSF9-203ENST00000492571 SEPT12Q8IYM1 358 aa14.56□□□□□ -0.08
TNFRSF9-203ENST00000492571 NAIPQ13075 1403 aa14.56□□□□□ -0.08
TNFRSF9-203ENST00000492571 EP400Q96L91 3159 aa14.55□□□□□ -0.08
TNFRSF9-203ENST00000492571 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF9-203ENST00000492571 PXDNQ92626 1479 aa14.55□□□□□ -0.08
TNFRSF9-203ENST00000492571 COL22A1Q8NFW1 1626 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF9-203ENST00000492571 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms