RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SEPT12Q8IYM1 358 aa18.45■□□□□ 0.54
CACNA1C-228ENST00000492150 ZNF784Q8NCA9 323 aaPredicted RBP18.45■□□□□ 0.54
CACNA1C-228ENST00000492150 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
CACNA1C-228ENST00000492150 C1QTNF8P60827 252 aa18.44■□□□□ 0.54
CACNA1C-228ENST00000492150 NINLQ9Y2I6 1382 aa18.43■□□□□ 0.54
CACNA1C-228ENST00000492150 ABCC5O15440 1437 aa18.43■□□□□ 0.54
CACNA1C-228ENST00000492150 KRT27Q7Z3Y8 459 aa18.43■□□□□ 0.54
CACNA1C-228ENST00000492150 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
CACNA1C-228ENST00000492150 NRXN3Q9Y4C0 1643 aa18.42■□□□□ 0.54
CACNA1C-228ENST00000492150 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
CACNA1C-228ENST00000492150 TNS1Q9HBL0 1735 aaKnown RBP18.39■□□□□ 0.53
CACNA1C-228ENST00000492150 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
CACNA1C-228ENST00000492150 DAPK1P53355 1430 aa18.37■□□□□ 0.53
CACNA1C-228ENST00000492150 PXDNQ92626 1479 aa18.36■□□□□ 0.53
CACNA1C-228ENST00000492150 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
CACNA1C-228ENST00000492150 VPS72Q15906 364 aa18.35■□□□□ 0.53
CACNA1C-228ENST00000492150 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
CACNA1C-228ENST00000492150 USP32Q8NFA0 1604 aa18.34■□□□□ 0.53
CACNA1C-228ENST00000492150 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
CACNA1C-228ENST00000492150 CHD4Q14839 1912 aa18.34■□□□□ 0.53
CACNA1C-228ENST00000492150 CHIC2Q9UKJ5 165 aa18.33■□□□□ 0.52
CACNA1C-228ENST00000492150 IQGAP3Q86VI3 1631 aa18.33■□□□□ 0.52
CACNA1C-228ENST00000492150 ADGRB2O60241 1585 aa18.33■□□□□ 0.52
CACNA1C-228ENST00000492150 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
CACNA1C-228ENST00000492150 PARD3Q8TEW0 1356 aa18.31■□□□□ 0.52
CACNA1C-228ENST00000492150 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
CACNA1C-228ENST00000492150 METP08581 1390 aa18.3■□□□□ 0.52
CACNA1C-228ENST00000492150 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
CACNA1C-228ENST00000492150 CEP350Q5VT06 3117 aa18.3■□□□□ 0.52
CACNA1C-228ENST00000492150 RREB1Q92766 1687 aa18.3■□□□□ 0.52
CACNA1C-228ENST00000492150 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
CACNA1C-228ENST00000492150 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
CACNA1C-228ENST00000492150 EZH2Q15910 746 aaKnown RBP18.28■□□□□ 0.52
CACNA1C-228ENST00000492150 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
CACNA1C-228ENST00000492150 SPON1Q9HCB6 807 aa18.27■□□□□ 0.52
CACNA1C-228ENST00000492150 UTRNP46939 3433 aa18.26■□□□□ 0.51
CACNA1C-228ENST00000492150 APLP2Q06481 763 aa18.26■□□□□ 0.51
CACNA1C-228ENST00000492150 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
CACNA1C-228ENST00000492150 PRAG1Q86YV5 1406 aa18.24■□□□□ 0.51
CACNA1C-228ENST00000492150 LRPPRCP42704 1394 aaKnown RBP18.23■□□□□ 0.51
CACNA1C-228ENST00000492150 KCNQ2O43526 872 aa18.22■□□□□ 0.51
CACNA1C-228ENST00000492150 E9PCH4 1651 aa18.21■□□□□ 0.51
CACNA1C-228ENST00000492150 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
CACNA1C-228ENST00000492150 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
CACNA1C-228ENST00000492150 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
CACNA1C-228ENST00000492150 THSD7AQ9UPZ6 1657 aa18.18■□□□□ 0.5
CACNA1C-228ENST00000492150 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
CACNA1C-228ENST00000492150 A0A0G2JS52 829 aa18.17■□□□□ 0.5
CACNA1C-228ENST00000492150 MYT1Q01538 1121 aa18.17■□□□□ 0.5
CACNA1C-228ENST00000492150 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
CACNA1C-228ENST00000492150 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
CACNA1C-228ENST00000492150 SPATA31A3Q5VYP0 1347 aa18.17■□□□□ 0.5
CACNA1C-228ENST00000492150 ABCA3Q99758 1704 aa18.16■□□□□ 0.5
CACNA1C-228ENST00000492150 FOXO3O43524 673 aa18.16■□□□□ 0.5
CACNA1C-228ENST00000492150 ESCO1Q5FWF5 840 aa18.16■□□□□ 0.5
CACNA1C-228ENST00000492150 NEXMIFQ5QGS0 1516 aa18.15■□□□□ 0.5
CACNA1C-228ENST00000492150 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
CACNA1C-228ENST00000492150 FAM98CQ17RN3 349 aaKnown RBP18.15■□□□□ 0.5
CACNA1C-228ENST00000492150 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
CACNA1C-228ENST00000492150 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
CACNA1C-228ENST00000492150 GIGYF1O75420 1035 aaPredicted RBP18.14■□□□□ 0.49
CACNA1C-228ENST00000492150 XPCQ01831 940 aaPredicted RBP18.14■□□□□ 0.49
CACNA1C-228ENST00000492150 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
CACNA1C-228ENST00000492150 CCDC144AA2RUR9 1427 aa18.12■□□□□ 0.49
CACNA1C-228ENST00000492150 KIF1AQ12756 1690 aa18.12■□□□□ 0.49
CACNA1C-228ENST00000492150 FAM182BQ5T319 152 aa18.11■□□□□ 0.49
CACNA1C-228ENST00000492150 CASZ1Q86V15 1759 aa18.1■□□□□ 0.49
CACNA1C-228ENST00000492150 APBA3O96018 575 aa18.09■□□□□ 0.49
CACNA1C-228ENST00000492150 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
CACNA1C-228ENST00000492150 TRIM37O94972 964 aa18.08■□□□□ 0.48
CACNA1C-228ENST00000492150 MYOM1P52179 1685 aa18.08■□□□□ 0.48
CACNA1C-228ENST00000492150 TNS3Q68CZ2 1445 aa18.07■□□□□ 0.48
CACNA1C-228ENST00000492150 HAP1P54257 671 aaPredicted RBP18.07■□□□□ 0.48
CACNA1C-228ENST00000492150 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
CACNA1C-228ENST00000492150 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
CACNA1C-228ENST00000492150 RGPD3A6NKT7 1758 aaPredicted RBP18.04■□□□□ 0.48
CACNA1C-228ENST00000492150 RGPD4Q7Z3J3 1758 aa18.04■□□□□ 0.48
CACNA1C-228ENST00000492150 SPATA31A5Q5VU36 1347 aa18.03■□□□□ 0.48
CACNA1C-228ENST00000492150 SPATA31A7Q8IWB4 1347 aa18.03■□□□□ 0.48
CACNA1C-228ENST00000492150 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
CACNA1C-228ENST00000492150 ROCK1Q13464 1354 aa18.01■□□□□ 0.47
CACNA1C-228ENST00000492150 DLC1Q96QB1 1528 aa18■□□□□ 0.47
CACNA1C-228ENST00000492150 CABLES1Q8TDN4 633 aa18■□□□□ 0.47
CACNA1C-228ENST00000492150 ARHGEF10O15013 1369 aa18■□□□□ 0.47
CACNA1C-228ENST00000492150 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
CACNA1C-228ENST00000492150 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
CACNA1C-228ENST00000492150 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
CACNA1C-228ENST00000492150 SYT17Q9BSW7 474 aa17.99■□□□□ 0.47
CACNA1C-228ENST00000492150 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
CACNA1C-228ENST00000492150 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
CACNA1C-228ENST00000492150 NAIPQ13075 1403 aa17.98■□□□□ 0.47
CACNA1C-228ENST00000492150 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
CACNA1C-228ENST00000492150 PTGER2P43116 358 aa17.98■□□□□ 0.47
CACNA1C-228ENST00000492150 NUP155O75694 1391 aa17.98■□□□□ 0.47
CACNA1C-228ENST00000492150 PSME1Q06323 249 aa17.95■□□□□ 0.46
CACNA1C-228ENST00000492150 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
CACNA1C-228ENST00000492150 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
CACNA1C-228ENST00000492150 SLC34A2O95436 690 aa17.91■□□□□ 0.46
CACNA1C-228ENST00000492150 HSPA6P17066 643 aa17.91■□□□□ 0.46
CACNA1C-228ENST00000492150 SPATA31A1Q5TZJ5 1347 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms