RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 KNSTRNQ9Y448 316 aa8.07□□□□□ -1.12
CCDC6-202ENST00000491922 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
CCDC6-202ENST00000491922 CHD1O14646 1710 aa8.07□□□□□ -1.12
CCDC6-202ENST00000491922 SYNMO15061 1565 aa8.07□□□□□ -1.12
CCDC6-202ENST00000491922 CFDP1Q9UEE9 299 aaPredicted RBP8.07□□□□□ -1.12
CCDC6-202ENST00000491922 WDR7Q9Y4E6 1490 aa8.07□□□□□ -1.12
CCDC6-202ENST00000491922 ASXL1Q8IXJ9 1541 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 MFAP1P55081 439 aaKnown RBP8.06□□□□□ -1.12
CCDC6-202ENST00000491922 DMTNQ08495 405 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 NOL7Q9UMY1 257 aaKnown RBP8.06□□□□□ -1.12
CCDC6-202ENST00000491922 NUP160Q12769 1436 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 MAGI2Q86UL8 1455 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 RAPGEF6Q8TEU7 1601 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 MYO5CQ9NQX4 1742 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 GOLGA6L22H0YM25 854 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
CCDC6-202ENST00000491922 TDRD9Q8NDG6 1382 aaKnown RBP8.06□□□□□ -1.12
CCDC6-202ENST00000491922 GPATCH8Q9UKJ3 1502 aaKnown RBP8.06□□□□□ -1.12
CCDC6-202ENST00000491922 RNF17Q9BXT8 1623 aaKnown RBP8.06□□□□□ -1.12
CCDC6-202ENST00000491922 APAF1O14727 1248 aa8.05□□□□□ -1.12
CCDC6-202ENST00000491922 MCM5P33992 734 aa8.05□□□□□ -1.12
CCDC6-202ENST00000491922 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
CCDC6-202ENST00000491922 NPC1L1Q9UHC9 1359 aa8.05□□□□□ -1.12
CCDC6-202ENST00000491922 TROQ12816 1431 aaPredicted RBP8.05□□□□□ -1.12
CCDC6-202ENST00000491922 NUP153P49790 1475 aaKnown RBP8.05□□□□□ -1.12
CCDC6-202ENST00000491922 CCDC141Q6ZP82 1450 aa8.05□□□□□ -1.12
CCDC6-202ENST00000491922 RBM25P49756 843 aaKnown RBP8.05□□□□□ -1.12
CCDC6-202ENST00000491922 AMER1Q5JTC6 1135 aaPredicted RBP8.05□□□□□ -1.12
CCDC6-202ENST00000491922 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
CCDC6-202ENST00000491922 CDC42BPAQ5VT25 1732 aa8.05□□□□□ -1.12
CCDC6-202ENST00000491922 ARHGAP31Q2M1Z3 1444 aa8.04□□□□□ -1.12
CCDC6-202ENST00000491922 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
CCDC6-202ENST00000491922 HSP90AB1P08238 724 aaKnown RBP8.04□□□□□ -1.12
CCDC6-202ENST00000491922 KLHL40Q2TBA0 621 aa8.04□□□□□ -1.12
CCDC6-202ENST00000491922 CCDC94Q9BW85 323 aaPredicted RBP8.04□□□□□ -1.12
CCDC6-202ENST00000491922 A2MP01023 1474 aa8.04□□□□□ -1.12
CCDC6-202ENST00000491922 TNNT2P45379 298 aaPredicted RBP8.04□□□□□ -1.12
CCDC6-202ENST00000491922 SASS6Q6UVJ0 657 aa8.04□□□□□ -1.12
CCDC6-202ENST00000491922 CLEC17AQ6ZS10 378 aa8.04□□□□□ -1.12
CCDC6-202ENST00000491922 C9orf84Q5VXU9 1444 aa8.04□□□□□ -1.12
CCDC6-202ENST00000491922 ZNF445P59923 1031 aa8.03□□□□□ -1.12
CCDC6-202ENST00000491922 PDLIM2Q96JY6 352 aa8.03□□□□□ -1.12
CCDC6-202ENST00000491922 PBRM1Q86U86 1689 aa8.03□□□□□ -1.12
CCDC6-202ENST00000491922 RARSP54136 660 aaKnown RBP8.02□□□□□ -1.12
CCDC6-202ENST00000491922 CDCA8Q53HL2 280 aa8.02□□□□□ -1.12
CCDC6-202ENST00000491922 ZHX1Q9UKY1 873 aaPredicted RBP8.02□□□□□ -1.12
CCDC6-202ENST00000491922 ZKSCAN5Q9Y2L8 839 aa8.02□□□□□ -1.12
CCDC6-202ENST00000491922 KIAA0556O60303 1618 aa8.02□□□□□ -1.13
CCDC6-202ENST00000491922 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
CCDC6-202ENST00000491922 GTPBP4Q9BZE4 634 aaKnown RBP8.02□□□□□ -1.13
CCDC6-202ENST00000491922 SYNJ2O15056 1496 aa8.02□□□□□ -1.13
CCDC6-202ENST00000491922 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
CCDC6-202ENST00000491922 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.01□□□□□ -1.13
CCDC6-202ENST00000491922 DDX49Q9Y6V7 483 aaKnown RBP8.01□□□□□ -1.13
CCDC6-202ENST00000491922 IQGAP1P46940 1657 aa8.01□□□□□ -1.13
CCDC6-202ENST00000491922 KIF20AO95235 890 aa8.01□□□□□ -1.13
CCDC6-202ENST00000491922 MYOM1P52179 1685 aa8.01□□□□□ -1.13
CCDC6-202ENST00000491922 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
CCDC6-202ENST00000491922 PRG4Q92954 1404 aaPredicted RBP8.01□□□□□ -1.13
CCDC6-202ENST00000491922 ZSCAN20P17040 1043 aaPredicted RBP8□□□□□ -1.13
CCDC6-202ENST00000491922 WWC1Q8IX03 1113 aa8□□□□□ -1.13
CCDC6-202ENST00000491922 PRDM10Q9NQV6 1147 aa8□□□□□ -1.13
CCDC6-202ENST00000491922 CCDC39Q9UFE4 941 aa8□□□□□ -1.13
CCDC6-202ENST00000491922 ZNF777Q9ULD5 760 aaPredicted RBP8□□□□□ -1.13
CCDC6-202ENST00000491922 RLBP1P12271 317 aa8□□□□□ -1.13
CCDC6-202ENST00000491922 KCNA4P22459 653 aa8□□□□□ -1.13
CCDC6-202ENST00000491922 MVPQ14764 893 aaKnown RBP8□□□□□ -1.13
CCDC6-202ENST00000491922 HDAC1Q13547 482 aaPredicted RBP7.99□□□□□ -1.13
CCDC6-202ENST00000491922 K7ELQ4 463 aaPredicted RBP7.99□□□□□ -1.13
CCDC6-202ENST00000491922 LETM1O95202 739 aaPredicted RBP7.99□□□□□ -1.13
CCDC6-202ENST00000491922 BAG4O95429 457 aaKnown RBP7.99□□□□□ -1.13
CCDC6-202ENST00000491922 ARHGEF5Q12774 1597 aa7.99□□□□□ -1.13
CCDC6-202ENST00000491922 KDM4FA0A1W2PPD8 638 aa7.99□□□□□ -1.13
CCDC6-202ENST00000491922 KANK1Q14678 1352 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 TSPY4P0CV99 314 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 TSPY10P0CW01 314 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 SSFA2P28290 1259 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 RGL3Q3MIN7 710 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 ZSCAN23Q3MJ62 389 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 MYRIPQ8NFW9 859 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 KDM5AP29375 1690 aaKnown RBP7.98□□□□□ -1.13
CCDC6-202ENST00000491922 UNC13BO14795 1591 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 TARBP1Q13395 1621 aaKnown RBP7.98□□□□□ -1.13
CCDC6-202ENST00000491922 DISP1Q96F81 1524 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 WDR63Q8IWG1 891 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 BBXQ8WY36 941 aaPredicted RBP7.98□□□□□ -1.13
CCDC6-202ENST00000491922 ARID3AQ99856 593 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 RBSNQ9H1K0 784 aa7.98□□□□□ -1.13
CCDC6-202ENST00000491922 PPP4R3BQ5MIZ7 849 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 RSPH4AQ5TD94 716 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 TAF3Q5VWG9 929 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 PRIMPOLQ96LW4 560 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 TNNQ9UQP3 1299 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 PLA2R1Q13018 1463 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 POLR3AO14802 1390 aaPredicted RBP7.97□□□□□ -1.13
CCDC6-202ENST00000491922 HMGN5P82970 282 aaKnown RBP7.97□□□□□ -1.13
CCDC6-202ENST00000491922 ZKSCAN2Q63HK3 967 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 PPP4R3CPQ6ZMV5 832 aa7.97□□□□□ -1.13
CCDC6-202ENST00000491922 IQSEC2Q5JU85 1478 aa7.96□□□□□ -1.13
CCDC6-202ENST00000491922 KIF16BQ96L93 1317 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms