RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 CDC42BPGQ6DT37 1551 aa27.16■■□□□ 1.94
SMIM4-205ENST00000491607 TECPR2O15040 1411 aa27.16■■□□□ 1.94
SMIM4-205ENST00000491607 LAMC1P11047 1609 aa27.13■■□□□ 1.93
SMIM4-205ENST00000491607 ABCC11Q96J66 1382 aa27.13■■□□□ 1.93
SMIM4-205ENST00000491607 ESCO1Q5FWF5 840 aa27.13■■□□□ 1.93
SMIM4-205ENST00000491607 AFF2P51816 1311 aa27.12■■□□□ 1.93
SMIM4-205ENST00000491607 SOS2Q07890 1332 aaPredicted RBP27.12■■□□□ 1.93
SMIM4-205ENST00000491607 YTHDC2Q9H6S0 1430 aaKnown RBP27.11■■□□□ 1.93
SMIM4-205ENST00000491607 C8orf37Q96NL8 207 aa27.11■■□□□ 1.93
SMIM4-205ENST00000491607 PLEKHH1Q9ULM0 1364 aa27.1■■□□□ 1.93
SMIM4-205ENST00000491607 KNDC1Q76NI1 1749 aa27.1■■□□□ 1.93
SMIM4-205ENST00000491607 NUTM2FA1L443 756 aa27.1■■□□□ 1.93
SMIM4-205ENST00000491607 MYOM2P54296 1465 aa27.09■■□□□ 1.93
SMIM4-205ENST00000491607 C14orf93Q9H972 538 aaKnown RBP27.09■■□□□ 1.93
SMIM4-205ENST00000491607 ADAMTS2O95450 1211 aa27.08■■□□□ 1.93
SMIM4-205ENST00000491607 RXRBP28702 533 aa27.08■■□□□ 1.93
SMIM4-205ENST00000491607 NRXN1Q9ULB1 1477 aa27.07■■□□□ 1.92
SMIM4-205ENST00000491607 CFAP70Q5T0N1 1121 aa27.07■■□□□ 1.92
SMIM4-205ENST00000491607 NPHP3Q7Z494 1330 aa27.06■■□□□ 1.92
SMIM4-205ENST00000491607 DHX57Q6P158 1386 aaKnown RBP27.05■■□□□ 1.92
SMIM4-205ENST00000491607 FOXO3O43524 673 aa27.03■■□□□ 1.92
SMIM4-205ENST00000491607 XPCQ01831 940 aaPredicted RBP27.03■■□□□ 1.92
SMIM4-205ENST00000491607 NGLY1Q96IV0 654 aa27.03■■□□□ 1.92
SMIM4-205ENST00000491607 SIRT1Q96EB6 747 aa27■■□□□ 1.91
SMIM4-205ENST00000491607 PXDNQ92626 1479 aa27■■□□□ 1.91
SMIM4-205ENST00000491607 QTRT2Q9H974 415 aaKnown RBP26.99■■□□□ 1.91
SMIM4-205ENST00000491607 FMN2Q9NZ56 1722 aa26.99■■□□□ 1.91
SMIM4-205ENST00000491607 SAFB2Q14151 953 aaKnown RBP eCLIP26.98■■□□□ 1.91
SMIM4-205ENST00000491607 PRAM1Q96QH2 718 aa26.97■■□□□ 1.91
SMIM4-205ENST00000491607 KDM2AQ9Y2K7 1162 aa26.97■■□□□ 1.91
SMIM4-205ENST00000491607 COL22A1Q8NFW1 1626 aaPredicted RBP26.97■■□□□ 1.91
SMIM4-205ENST00000491607 CDK12Q9NYV4 1490 aaPredicted RBP26.96■■□□□ 1.91
SMIM4-205ENST00000491607 HRCP23327 699 aa26.95■■□□□ 1.9
SMIM4-205ENST00000491607 DCAF11Q8TEB1 546 aa26.95■■□□□ 1.9
SMIM4-205ENST00000491607 RBM6P78332 1123 aaKnown RBP26.94■■□□□ 1.9
SMIM4-205ENST00000491607 POGKQ9P215 609 aa26.94■■□□□ 1.9
SMIM4-205ENST00000491607 USP21Q9UK80 565 aa26.93■■□□□ 1.9
SMIM4-205ENST00000491607 KIF1AQ12756 1690 aa26.92■■□□□ 1.9
SMIM4-205ENST00000491607 UPF1Q92900 1129 aaKnown RBP eCLIP26.9■■□□□ 1.9
SMIM4-205ENST00000491607 DLC1Q96QB1 1528 aa26.9■■□□□ 1.9
SMIM4-205ENST00000491607 RGS12O14924 1447 aa26.9■■□□□ 1.9
SMIM4-205ENST00000491607 ADGRB1O14514 1584 aa26.89■■□□□ 1.9
SMIM4-205ENST00000491607 TRAK1Q9UPV9 953 aa26.89■■□□□ 1.9
SMIM4-205ENST00000491607 KRT28Q7Z3Y7 464 aa26.88■■□□□ 1.89
SMIM4-205ENST00000491607 PHF8Q9UPP1 1060 aa26.88■■□□□ 1.89
SMIM4-205ENST00000491607 FNBP4Q8N3X1 1017 aaPredicted RBP26.87■■□□□ 1.89
SMIM4-205ENST00000491607 TRPC5Q9UL62 973 aaPredicted RBP26.86■■□□□ 1.89
SMIM4-205ENST00000491607 SPATA31A3Q5VYP0 1347 aa26.86■■□□□ 1.89
SMIM4-205ENST00000491607 RGPD8O14715 1765 aaPredicted RBP26.84■■□□□ 1.89
SMIM4-205ENST00000491607 STAC3Q96MF2 364 aa26.84■■□□□ 1.89
SMIM4-205ENST00000491607 PSME1Q06323 249 aa26.83■■□□□ 1.89
SMIM4-205ENST00000491607 HIRIP3Q9BW71 556 aaPredicted RBP26.83■■□□□ 1.89
SMIM4-205ENST00000491607 ADGRB2O60241 1585 aa26.81■■□□□ 1.88
SMIM4-205ENST00000491607 MINK1Q8N4C8 1332 aaPredicted RBP26.81■■□□□ 1.88
SMIM4-205ENST00000491607 PMFBP1Q8TBY8 1022 aa26.8■■□□□ 1.88
SMIM4-205ENST00000491607 TNS3Q68CZ2 1445 aa26.8■■□□□ 1.88
SMIM4-205ENST00000491607 ANKARQ7Z5J8 1434 aa26.8■■□□□ 1.88
SMIM4-205ENST00000491607 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
SMIM4-205ENST00000491607 PLEKHG5O94827 1062 aa26.79■■□□□ 1.88
SMIM4-205ENST00000491607 HAP1P54257 671 aaPredicted RBP26.79■■□□□ 1.88
SMIM4-205ENST00000491607 ATRNO75882 1429 aa26.79■■□□□ 1.88
SMIM4-205ENST00000491607 LMOD2Q6P5Q4 547 aa26.78■■□□□ 1.88
SMIM4-205ENST00000491607 USP32Q8NFA0 1604 aa26.78■■□□□ 1.88
SMIM4-205ENST00000491607 BCL9LQ86UU0 1499 aa26.77■■□□□ 1.88
SMIM4-205ENST00000491607 EIF3AQ14152 1382 aaKnown RBP26.75■■□□□ 1.87
SMIM4-205ENST00000491607 SBNO1A3KN83 1393 aa26.74■■□□□ 1.87
SMIM4-205ENST00000491607 CABLES1Q8TDN4 633 aa26.74■■□□□ 1.87
SMIM4-205ENST00000491607 WASLO00401 505 aaPredicted RBP26.73■■□□□ 1.87
SMIM4-205ENST00000491607 TULP4Q9NRJ4 1543 aa26.72■■□□□ 1.87
SMIM4-205ENST00000491607 ARHGEF10O15013 1369 aa26.71■■□□□ 1.87
SMIM4-205ENST00000491607 ATAD2Q6PL18 1390 aa26.71■■□□□ 1.87
SMIM4-205ENST00000491607 PRR36Q9H6K5 1346 aa26.7■■□□□ 1.87
SMIM4-205ENST00000491607 UNC5CLQ8IV45 518 aa26.7■■□□□ 1.86
SMIM4-205ENST00000491607 GJD4Q96KN9 370 aaPredicted RBP26.7■■□□□ 1.86
SMIM4-205ENST00000491607 ARHGEF28Q8N1W1 1705 aaKnown RBP26.69■■□□□ 1.86
SMIM4-205ENST00000491607 SLIT2O94813 1529 aa26.69■■□□□ 1.86
SMIM4-205ENST00000491607 GPRASP1Q5JY77 1395 aa26.69■■□□□ 1.86
SMIM4-205ENST00000491607 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.67■■□□□ 1.86
SMIM4-205ENST00000491607 NGDNQ8NEJ9 315 aaKnown RBP26.65■■□□□ 1.86
SMIM4-205ENST00000491607 ABCA3Q99758 1704 aa26.64■■□□□ 1.85
SMIM4-205ENST00000491607 RALGAPBQ86X10 1494 aa26.62■■□□□ 1.85
SMIM4-205ENST00000491607 TRPM3Q9HCF6 1732 aaPredicted RBP26.62■■□□□ 1.85
SMIM4-205ENST00000491607 PAK3O75914 559 aaPredicted RBP26.61■■□□□ 1.85
SMIM4-205ENST00000491607 NUDT16Q96DE0 195 aaKnown RBP26.61■■□□□ 1.85
SMIM4-205ENST00000491607 KIAA1210Q9ULL0 1709 aa26.61■■□□□ 1.85
SMIM4-205ENST00000491607 GLI3P10071 1580 aa26.6■■□□□ 1.85
SMIM4-205ENST00000491607 CCDC9Q9Y3X0 531 aaKnown RBP26.6■■□□□ 1.85
SMIM4-205ENST00000491607 ATP7BP35670 1465 aa26.6■■□□□ 1.85
SMIM4-205ENST00000491607 PLCH1Q4KWH8 1693 aa26.6■■□□□ 1.85
SMIM4-205ENST00000491607 NBPF1Q3BBV0 1214 aa26.59■■□□□ 1.85
SMIM4-205ENST00000491607 CDK19Q9BWU1 502 aa26.59■■□□□ 1.85
SMIM4-205ENST00000491607 ALS2Q96Q42 1657 aa26.58■■□□□ 1.85
SMIM4-205ENST00000491607 ITSN1Q15811 1721 aa26.57■■□□□ 1.84
SMIM4-205ENST00000491607 FAM83GA6ND36 823 aa26.57■■□□□ 1.84
SMIM4-205ENST00000491607 VPS72Q15906 364 aa26.57■■□□□ 1.84
SMIM4-205ENST00000491607 NWD2Q9ULI1 1742 aa26.56■■□□□ 1.84
SMIM4-205ENST00000491607 BTG4Q9NY30 223 aa26.52■■□□□ 1.84
SMIM4-205ENST00000491607 SEPT12Q8IYM1 358 aa26.51■■□□□ 1.83
SMIM4-205ENST00000491607 L3MBTL2Q969R5 705 aa26.51■■□□□ 1.83
SMIM4-205ENST00000491607 SIN3AQ96ST3 1273 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms