RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 PROSER2Q86WR7 435 aaPredicted RBP11.73□□□□□ -0.53
RNF38-209ENST00000491349 STK26Q9P289 416 aa11.73□□□□□ -0.53
RNF38-209ENST00000491349 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
RNF38-209ENST00000491349 NWD1Q149M9 1564 aa11.72□□□□□ -0.53
RNF38-209ENST00000491349 ZNF335Q9H4Z2 1342 aaPredicted RBP11.72□□□□□ -0.53
RNF38-209ENST00000491349 POGKQ9P215 609 aa11.72□□□□□ -0.53
RNF38-209ENST00000491349 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.53
RNF38-209ENST00000491349 METP08581 1390 aa11.71□□□□□ -0.53
RNF38-209ENST00000491349 LRPPRCP42704 1394 aaKnown RBP11.71□□□□□ -0.53
RNF38-209ENST00000491349 TMEM132EQ6IEE7 984 aa11.71□□□□□ -0.53
RNF38-209ENST00000491349 CARD11Q9BXL7 1154 aa11.71□□□□□ -0.53
RNF38-209ENST00000491349 XRN1Q8IZH2 1706 aaKnown RBP11.7□□□□□ -0.54
RNF38-209ENST00000491349 SLC24A1O60721 1099 aa11.7□□□□□ -0.54
RNF38-209ENST00000491349 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
RNF38-209ENST00000491349 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
RNF38-209ENST00000491349 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
RNF38-209ENST00000491349 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
RNF38-209ENST00000491349 TRAK1Q9UPV9 953 aa11.69□□□□□ -0.54
RNF38-209ENST00000491349 PTCH1Q13635 1447 aa11.69□□□□□ -0.54
RNF38-209ENST00000491349 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
RNF38-209ENST00000491349 MSH6P52701 1360 aa11.68□□□□□ -0.54
RNF38-209ENST00000491349 DLC1Q96QB1 1528 aa11.68□□□□□ -0.54
RNF38-209ENST00000491349 FAM135BQ49AJ0 1406 aa11.68□□□□□ -0.54
RNF38-209ENST00000491349 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
RNF38-209ENST00000491349 TECPR2O15040 1411 aa11.67□□□□□ -0.54
RNF38-209ENST00000491349 STRCP1A6NGW2 1772 aa11.67□□□□□ -0.54
RNF38-209ENST00000491349 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
RNF38-209ENST00000491349 ATF3P18847 181 aa11.66□□□□□ -0.54
RNF38-209ENST00000491349 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
RNF38-209ENST00000491349 NBPF8Q3BBV2 869 aa11.66□□□□□ -0.54
RNF38-209ENST00000491349 PTPRUQ92729 1446 aa11.66□□□□□ -0.54
RNF38-209ENST00000491349 LTBP4Q8N2S1 1624 aa11.65□□□□□ -0.54
RNF38-209ENST00000491349 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
RNF38-209ENST00000491349 CERKQ8TCT0 537 aa11.65□□□□□ -0.54
RNF38-209ENST00000491349 PRAM1Q96QH2 718 aa11.65□□□□□ -0.54
RNF38-209ENST00000491349 ARHGEF28Q8N1W1 1705 aaKnown RBP11.65□□□□□ -0.54
RNF38-209ENST00000491349 TMEM94Q12767 1356 aa11.65□□□□□ -0.55
RNF38-209ENST00000491349 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.55
RNF38-209ENST00000491349 LRRC7Q96NW7 1537 aa11.65□□□□□ -0.55
RNF38-209ENST00000491349 CENPJQ9HC77 1338 aaPredicted RBP11.64□□□□□ -0.55
RNF38-209ENST00000491349 TOM1O60784 492 aa11.64□□□□□ -0.55
RNF38-209ENST00000491349 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
RNF38-209ENST00000491349 C19orf44Q9H6X5 657 aa11.64□□□□□ -0.55
RNF38-209ENST00000491349 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
RNF38-209ENST00000491349 GPRASP1Q5JY77 1395 aa11.64□□□□□ -0.55
RNF38-209ENST00000491349 EIF4G2P78344 907 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNF38-209ENST00000491349 SAFB2Q14151 953 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNF38-209ENST00000491349 QRICH2Q9H0J4 1663 aa11.62□□□□□ -0.55
RNF38-209ENST00000491349 ROBO2Q9HCK4 1378 aa11.62□□□□□ -0.55
RNF38-209ENST00000491349 DCCP43146 1447 aa11.61□□□□□ -0.55
RNF38-209ENST00000491349 ADGRL3Q9HAR2 1447 aa11.61□□□□□ -0.55
RNF38-209ENST00000491349 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
RNF38-209ENST00000491349 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
RNF38-209ENST00000491349 USP47Q96K76 1375 aa11.61□□□□□ -0.55
RNF38-209ENST00000491349 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
RNF38-209ENST00000491349 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.6□□□□□ -0.55
RNF38-209ENST00000491349 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
RNF38-209ENST00000491349 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
RNF38-209ENST00000491349 NALCNQ8IZF0 1738 aa11.6□□□□□ -0.55
RNF38-209ENST00000491349 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
RNF38-209ENST00000491349 UBAP1LF5GYI3 381 aa11.59□□□□□ -0.55
RNF38-209ENST00000491349 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
RNF38-209ENST00000491349 CDC42BPGQ6DT37 1551 aa11.58□□□□□ -0.55
RNF38-209ENST00000491349 TMF1P82094 1093 aa11.58□□□□□ -0.56
RNF38-209ENST00000491349 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
RNF38-209ENST00000491349 ADGRB2O60241 1585 aa11.57□□□□□ -0.56
RNF38-209ENST00000491349 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
RNF38-209ENST00000491349 PLEKHH1Q9ULM0 1364 aa11.56□□□□□ -0.56
RNF38-209ENST00000491349 SBNO2Q9Y2G9 1366 aa11.56□□□□□ -0.56
RNF38-209ENST00000491349 ST20-MTHFSA0A0A6YYL1 179 aa11.56□□□□□ -0.56
RNF38-209ENST00000491349 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
RNF38-209ENST00000491349 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
RNF38-209ENST00000491349 FMN2Q9NZ56 1722 aa11.55□□□□□ -0.56
RNF38-209ENST00000491349 SLAIN2Q9P270 581 aa11.55□□□□□ -0.56
RNF38-209ENST00000491349 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
RNF38-209ENST00000491349 CDK19Q9BWU1 502 aa11.54□□□□□ -0.56
RNF38-209ENST00000491349 ANKARQ7Z5J8 1434 aa11.53□□□□□ -0.56
RNF38-209ENST00000491349 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
RNF38-209ENST00000491349 ATAD2Q6PL18 1390 aa11.53□□□□□ -0.56
RNF38-209ENST00000491349 TULP4Q9NRJ4 1543 aa11.52□□□□□ -0.57
RNF38-209ENST00000491349 HSPA5P11021 654 aaKnown RBP11.52□□□□□ -0.57
RNF38-209ENST00000491349 ESCO1Q5FWF5 840 aa11.52□□□□□ -0.57
RNF38-209ENST00000491349 KIF1AQ12756 1690 aa11.52□□□□□ -0.57
RNF38-209ENST00000491349 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
RNF38-209ENST00000491349 PUS7Q96PZ0 661 aaKnown RBP11.51□□□□□ -0.57
RNF38-209ENST00000491349 NGDNQ8NEJ9 315 aaKnown RBP11.5□□□□□ -0.57
RNF38-209ENST00000491349 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
RNF38-209ENST00000491349 FBXO41Q8TF61 875 aa11.5□□□□□ -0.57
RNF38-209ENST00000491349 NUDT16Q96DE0 195 aaKnown RBP11.5□□□□□ -0.57
RNF38-209ENST00000491349 POLR3GLQ9BT43 218 aa11.5□□□□□ -0.57
RNF38-209ENST00000491349 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
RNF38-209ENST00000491349 MST1RQ04912 1400 aa11.5□□□□□ -0.57
RNF38-209ENST00000491349 C1orf167Q5SNV9 1468 aa11.5□□□□□ -0.57
RNF38-209ENST00000491349 RGPD8O14715 1765 aaPredicted RBP11.49□□□□□ -0.57
RNF38-209ENST00000491349 PSME1Q06323 249 aa11.49□□□□□ -0.57
RNF38-209ENST00000491349 TMC1Q8TDI8 760 aa11.49□□□□□ -0.57
RNF38-209ENST00000491349 CABP2Q9NPB3 220 aa11.49□□□□□ -0.57
RNF38-209ENST00000491349 NINLQ9Y2I6 1382 aa11.49□□□□□ -0.57
RNF38-209ENST00000491349 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
RNF38-209ENST00000491349 HDGFL2Q7Z4V5 671 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms