RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 NRG2O14511 850 aaPredicted RBP4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 FDX1P10109 184 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 NDUFV2P19404 249 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 GUCA2AQ02747 115 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 NUTM2DQ5VT03 806 aaPredicted RBP4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 BRICD5Q6PL45 260 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 RNF19BQ6ZMZ0 732 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 NUTM2AQ8IVF1 878 aaPredicted RBP4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 CYP4X1Q8N118 509 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 SYMPKQ92797 1274 aaKnown RBP4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 SLC24A3Q9HC58 644 aa4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 FAM217BQ9NTX9 383 aaPredicted RBP4.08□□□□□ -1.76
SNRNP40-207ENST00000491106 GIGYF2Q6Y7W6 1299 aaKnown RBP4.07□□□□□ -1.76
SNRNP40-207ENST00000491106 FAM160A2Q8N612 972 aaPredicted RBP4.07□□□□□ -1.76
SNRNP40-207ENST00000491106 HLA-CQ95604 372 aa4.07□□□□□ -1.76
SNRNP40-207ENST00000491106 PRDM9Q9NQV7 894 aa4.07□□□□□ -1.76
SNRNP40-207ENST00000491106 TRIM66O15016 1216 aa4.06□□□□□ -1.76
SNRNP40-207ENST00000491106 HOXA2O43364 376 aa4.06□□□□□ -1.76
SNRNP40-207ENST00000491106 CTHP32929 405 aa4.06□□□□□ -1.76
SNRNP40-207ENST00000491106 DIXDC1Q155Q3 683 aa4.06□□□□□ -1.76
SNRNP40-207ENST00000491106 ZNF787Q6DD87 383 aa4.06□□□□□ -1.76
SNRNP40-207ENST00000491106 SPIRE2Q8WWL2 714 aa4.06□□□□□ -1.76
SNRNP40-207ENST00000491106 SALL2Q9Y467 1007 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-207ENST00000491106 RPIAP49247 311 aa4.05□□□□□ -1.76
SNRNP40-207ENST00000491106 THAP11Q96EK4 314 aa4.05□□□□□ -1.76
SNRNP40-207ENST00000491106 REPIN1Q9BWE0 567 aaKnown RBP4.05□□□□□ -1.76
SNRNP40-207ENST00000491106 MOXD2PA6NHM9 499 aa4.04□□□□□ -1.76
SNRNP40-207ENST00000491106 MS4A1P11836 297 aa4.04□□□□□ -1.76
SNRNP40-207ENST00000491106 PDE4DQ08499 809 aa4.04□□□□□ -1.76
SNRNP40-207ENST00000491106 AGERQ15109 404 aa4.04□□□□□ -1.76
SNRNP40-207ENST00000491106 PLA2G2CQ5R387 149 aa4.04□□□□□ -1.76
SNRNP40-207ENST00000491106 TBC1D2Q9BYX2 928 aa4.04□□□□□ -1.76
SNRNP40-207ENST00000491106 DGAT1O75907 488 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 MTMR2Q13614 643 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 MSS51Q4VC12 460 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 RIC3Q7Z5B4 369 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 RETREG3Q86VR2 466 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 PRR7Q8TB68 274 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 NUDT12Q9BQG2 462 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 POLR3EQ9NVU0 708 aa4.03□□□□□ -1.76
SNRNP40-207ENST00000491106 JUNDP17535 347 aa4.02□□□□□ -1.77
SNRNP40-207ENST00000491106 AMHR2Q16671 573 aa4.02□□□□□ -1.77
SNRNP40-207ENST00000491106 EHBP1Q8NDI1 1231 aa4.02□□□□□ -1.77
SNRNP40-207ENST00000491106 RSPH6AQ9H0K4 717 aa4.02□□□□□ -1.77
SNRNP40-207ENST00000491106 WASF2Q9Y6W5 498 aa4.02□□□□□ -1.77
SNRNP40-207ENST00000491106 SPDYE5A6NIY4 337 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 ALDH1A1P00352 501 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 TRIM32Q13049 653 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 ARID5BQ14865 1188 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 LINC01559Q495D7 138 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 RC3H1Q5TC82 1133 aaKnown RBP4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 PARP9Q8IXQ6 854 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 SNIP1Q8TAD8 396 aaKnown RBP4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 ZBTB3Q9H5J0 574 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 PCDHB15Q9Y5E8 787 aa4.01□□□□□ -1.77
SNRNP40-207ENST00000491106 AXIN1O15169 862 aa4□□□□□ -1.77
SNRNP40-207ENST00000491106 DXOO77932 396 aaKnown RBP4□□□□□ -1.77
SNRNP40-207ENST00000491106 CCNYL3P0C7X3 344 aa4□□□□□ -1.77
SNRNP40-207ENST00000491106 MMP16P51512 607 aa4□□□□□ -1.77
SNRNP40-207ENST00000491106 EMID1Q96A84 441 aaPredicted RBP4□□□□□ -1.77
SNRNP40-207ENST00000491106 PCDHGC3Q9UN70 934 aa4□□□□□ -1.77
SNRNP40-207ENST00000491106 ST8SIA5O15466 376 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 GDF9O60383 454 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 HRCP23327 699 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 PRR20EP86478 221 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 PRR20CP86479 221 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 PRR20DP86480 221 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 PRR20BP86481 221 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 PRR20AP86496 221 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 MYT1Q01538 1121 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 TRIM67Q6ZTA4 783 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 CABLES1Q8TDN4 633 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 BAP1Q92560 729 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 MRGPRX2Q96LB1 330 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 PKD2L1Q9P0L9 805 aa3.99□□□□□ -1.77
SNRNP40-207ENST00000491106 WNT7AO00755 349 aa3.98□□□□□ -1.77
SNRNP40-207ENST00000491106 PTCRAQ6ISU1 281 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-207ENST00000491106 RSBN1LQ6PCB5 846 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-207ENST00000491106 HELBQ8NG08 1087 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-207ENST00000491106 EVA1BQ9NVM1 165 aa3.98□□□□□ -1.77
SNRNP40-207ENST00000491106 C11orf95C9JLR9 678 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-207ENST00000491106 J3QL48 77 aa3.97□□□□□ -1.77
SNRNP40-207ENST00000491106 KCNH2Q12809 1159 aa3.97□□□□□ -1.77
SNRNP40-207ENST00000491106 NEUROD2Q15784 382 aa3.97□□□□□ -1.77
SNRNP40-207ENST00000491106 PTPRNQ16849 979 aa3.97□□□□□ -1.77
SNRNP40-207ENST00000491106 UNC93B1Q9H1C4 597 aa3.97□□□□□ -1.77
SNRNP40-207ENST00000491106 PLEKHG3A1L390 1219 aa3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 SPTLC1O15269 473 aa3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 CLK2P49760 499 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 WNT7BP56706 349 aa3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 MYSM1Q5VVJ2 828 aa3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 IL27Q8NEV9 243 aa3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 KDM4CQ9H3R0 1056 aa3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 GPBP1L1Q9HC44 474 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-207ENST00000491106 MAGEB6P1A0A0J9YX57 407 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 CFAP99D6REC4 459 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 AP1G2O75843 785 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 SH3BP2P78314 561 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 PRPF38BQ5VTL8 546 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 LYPD8Q6UX82 237 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms