RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 CDK11AQ9UQ88 783 aaPredicted RBP7.47□□□□□ -1.21
EPCAM-206ENST00000490733 KDM2AQ9Y2K7 1162 aa7.47□□□□□ -1.21
EPCAM-206ENST00000490733 WDR7Q9Y4E6 1490 aa7.47□□□□□ -1.21
EPCAM-206ENST00000490733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.47□□□□□ -1.21
EPCAM-206ENST00000490733 CDC42BPBQ9Y5S2 1711 aa7.47□□□□□ -1.21
EPCAM-206ENST00000490733 MYOM3Q5VTT5 1437 aa7.46□□□□□ -1.21
EPCAM-206ENST00000490733 MLLT3P42568 568 aaPredicted RBP7.46□□□□□ -1.22
EPCAM-206ENST00000490733 MAPKBP1O60336 1514 aa7.46□□□□□ -1.22
EPCAM-206ENST00000490733 GPATCH8Q9UKJ3 1502 aaKnown RBP7.46□□□□□ -1.22
EPCAM-206ENST00000490733 FGD6Q6ZV73 1430 aa7.45□□□□□ -1.22
EPCAM-206ENST00000490733 PREX2Q70Z35 1606 aa7.45□□□□□ -1.22
EPCAM-206ENST00000490733 ITSN2Q9NZM3 1697 aa7.44□□□□□ -1.22
EPCAM-206ENST00000490733 PCGF6Q9BYE7 350 aa7.44□□□□□ -1.22
EPCAM-206ENST00000490733 RABGEF1Q9UJ41 708 aa7.44□□□□□ -1.22
EPCAM-206ENST00000490733 ABCA9Q8IUA7 1624 aa7.44□□□□□ -1.22
EPCAM-206ENST00000490733 PTPN23Q9H3S7 1636 aa7.44□□□□□ -1.22
EPCAM-206ENST00000490733 CCNB3Q8WWL7 1395 aa7.44□□□□□ -1.22
EPCAM-206ENST00000490733 MYO5CQ9NQX4 1742 aa7.44□□□□□ -1.22
EPCAM-206ENST00000490733 CDHR5Q9HBB8 845 aa7.43□□□□□ -1.22
EPCAM-206ENST00000490733 TCOF1Q13428 1488 aaKnown RBP7.43□□□□□ -1.22
EPCAM-206ENST00000490733 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
EPCAM-206ENST00000490733 GFRA3O60609 400 aa7.42□□□□□ -1.22
EPCAM-206ENST00000490733 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
EPCAM-206ENST00000490733 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
EPCAM-206ENST00000490733 KIAA1468Q9P260 1216 aa7.42□□□□□ -1.22
EPCAM-206ENST00000490733 MIA2Q96PC5 1412 aa7.42□□□□□ -1.22
EPCAM-206ENST00000490733 KIF13AQ9H1H9 1805 aa7.41□□□□□ -1.22
EPCAM-206ENST00000490733 SEMA3EO15041 775 aa7.41□□□□□ -1.22
EPCAM-206ENST00000490733 ONECUT3O60422 494 aaPredicted RBP7.41□□□□□ -1.22
EPCAM-206ENST00000490733 TSKSQ9UJT2 592 aa7.41□□□□□ -1.22
EPCAM-206ENST00000490733 ZNF644Q9H582 1327 aaPredicted RBP7.41□□□□□ -1.22
EPCAM-206ENST00000490733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.41□□□□□ -1.22
EPCAM-206ENST00000490733 SAMD9LQ8IVG5 1584 aa7.41□□□□□ -1.22
EPCAM-206ENST00000490733 DIP2BQ9P265 1576 aa7.41□□□□□ -1.22
EPCAM-206ENST00000490733 PLCH2O75038 1416 aa7.4□□□□□ -1.22
EPCAM-206ENST00000490733 PTPRKQ15262 1439 aa7.4□□□□□ -1.22
EPCAM-206ENST00000490733 CAMSAP2Q08AD1 1489 aa7.4□□□□□ -1.22
EPCAM-206ENST00000490733 GLI2P10070 1586 aa7.4□□□□□ -1.22
EPCAM-206ENST00000490733 MAP3K4Q9Y6R4 1608 aa7.4□□□□□ -1.22
EPCAM-206ENST00000490733 ARAP3Q8WWN8 1544 aa7.39□□□□□ -1.23
EPCAM-206ENST00000490733 VSIG10Q8N0Z9 540 aa7.39□□□□□ -1.23
EPCAM-206ENST00000490733 CDCA7LQ96GN5 454 aa7.39□□□□□ -1.23
EPCAM-206ENST00000490733 CFDP1Q9UEE9 299 aaPredicted RBP7.39□□□□□ -1.23
EPCAM-206ENST00000490733 PPRC1Q5VV67 1664 aaKnown RBP7.38□□□□□ -1.23
EPCAM-206ENST00000490733 DNMT1P26358 1616 aaKnown RBP7.38□□□□□ -1.23
EPCAM-206ENST00000490733 ARHGAP5Q13017 1502 aa7.38□□□□□ -1.23
EPCAM-206ENST00000490733 GOLGA8CPA6NN73 597 aa7.38□□□□□ -1.23
EPCAM-206ENST00000490733 PRSS12P56730 875 aa7.38□□□□□ -1.23
EPCAM-206ENST00000490733 FAM50AQ14320 339 aaKnown RBP7.38□□□□□ -1.23
EPCAM-206ENST00000490733 CERKQ8TCT0 537 aa7.38□□□□□ -1.23
EPCAM-206ENST00000490733 WNT2BQ93097 391 aa7.38□□□□□ -1.23
EPCAM-206ENST00000490733 NPDC1Q9NQX5 325 aaPredicted RBP7.38□□□□□ -1.23
EPCAM-206ENST00000490733 FAM198AQ9UFP1 575 aa7.38□□□□□ -1.23
EPCAM-206ENST00000490733 SEPT9Q9UHD8 586 aaPredicted RBP7.38□□□□□ -1.23
EPCAM-206ENST00000490733 CROCC2H7BZ55 1655 aa7.38□□□□□ -1.23
EPCAM-206ENST00000490733 ARHGEF12Q9NZN5 1544 aa7.37□□□□□ -1.23
EPCAM-206ENST00000490733 MBD5Q9P267 1494 aa7.37□□□□□ -1.23
EPCAM-206ENST00000490733 THSD4Q6ZMP0 1018 aa7.37□□□□□ -1.23
EPCAM-206ENST00000490733 ABCC1P33527 1531 aa7.37□□□□□ -1.23
EPCAM-206ENST00000490733 TSPOAP1O95153 1857 aa7.36□□□□□ -1.23
EPCAM-206ENST00000490733 ABCC5O15440 1437 aa7.36□□□□□ -1.23
EPCAM-206ENST00000490733 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
EPCAM-206ENST00000490733 ZNF777Q9ULD5 760 aaPredicted RBP7.36□□□□□ -1.23
EPCAM-206ENST00000490733 ARHGEF5Q12774 1597 aa7.36□□□□□ -1.23
EPCAM-206ENST00000490733 SYCP2Q9BX26 1530 aa7.36□□□□□ -1.23
EPCAM-206ENST00000490733 DAPK1P53355 1430 aa7.35□□□□□ -1.23
EPCAM-206ENST00000490733 CD109Q6YHK3 1445 aa7.35□□□□□ -1.23
EPCAM-206ENST00000490733 C3orf80F5H4A9 247 aa7.35□□□□□ -1.23
EPCAM-206ENST00000490733 ITGAEP38570 1179 aa7.35□□□□□ -1.23
EPCAM-206ENST00000490733 PACS2Q86VP3 889 aa7.35□□□□□ -1.23
EPCAM-206ENST00000490733 ZFRQ96KR1 1074 aaKnown RBP7.35□□□□□ -1.23
EPCAM-206ENST00000490733 FANCAO15360 1455 aa7.35□□□□□ -1.23
EPCAM-206ENST00000490733 TESPA1A2RU30 521 aaPredicted RBP7.34□□□□□ -1.23
EPCAM-206ENST00000490733 SMAPO00193 183 aa7.34□□□□□ -1.23
EPCAM-206ENST00000490733 FAM69CQ0P6D2 419 aa7.34□□□□□ -1.23
EPCAM-206ENST00000490733 KIAA1107Q9UPP5 1409 aa7.34□□□□□ -1.23
EPCAM-206ENST00000490733 ADGBQ8N7X0 1667 aa7.33□□□□□ -1.24
EPCAM-206ENST00000490733 BCAMP50895 628 aa7.33□□□□□ -1.24
EPCAM-206ENST00000490733 HNRNPMP52272 730 aaKnown RBP eCLIP7.33□□□□□ -1.24
EPCAM-206ENST00000490733 FAM98CQ17RN3 349 aaKnown RBP7.33□□□□□ -1.24
EPCAM-206ENST00000490733 EFCAB2Q5VUJ9 269 aa7.33□□□□□ -1.24
EPCAM-206ENST00000490733 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
EPCAM-206ENST00000490733 ANKK1Q8NFD2 765 aa7.33□□□□□ -1.24
EPCAM-206ENST00000490733 RBM27Q9P2N5 1060 aaKnown RBP7.33□□□□□ -1.24
EPCAM-206ENST00000490733 TRAPPC8Q9Y2L5 1435 aa7.33□□□□□ -1.24
EPCAM-206ENST00000490733 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
EPCAM-206ENST00000490733 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 CCDC141Q6ZP82 1450 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 PLEKHH2Q8IVE3 1493 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 SHANK2Q9UPX8 1470 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 NRG2O14511 850 aaPredicted RBP7.32□□□□□ -1.24
EPCAM-206ENST00000490733 PTGDRQ13258 359 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 TATDN2Q93075 761 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 AKNAQ7Z591 1439 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 MAST1Q9Y2H9 1570 aa7.32□□□□□ -1.24
EPCAM-206ENST00000490733 ADGRL1O94910 1474 aa7.31□□□□□ -1.24
EPCAM-206ENST00000490733 ADGRL2O95490 1459 aa7.31□□□□□ -1.24
EPCAM-206ENST00000490733 NEO1Q92859 1461 aa7.31□□□□□ -1.24
EPCAM-206ENST00000490733 KDM6BO15054 1643 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms