RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 PRR20AP86496 221 aa8.29□□□□□ -1.08
CSTF1-205ENST00000490539 AMHR2Q16671 573 aa8.29□□□□□ -1.08
CSTF1-205ENST00000490539 SPRYD7Q5W111 196 aa8.29□□□□□ -1.08
CSTF1-205ENST00000490539 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
CSTF1-205ENST00000490539 MROH2BQ7Z745 1585 aa8.29□□□□□ -1.08
CSTF1-205ENST00000490539 PEG3Q9GZU2 1588 aa8.28□□□□□ -1.08
CSTF1-205ENST00000490539 TRIM66O15016 1216 aa8.28□□□□□ -1.08
CSTF1-205ENST00000490539 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
CSTF1-205ENST00000490539 NESP48681 1621 aa8.28□□□□□ -1.08
CSTF1-205ENST00000490539 POTECB2RU33 542 aa8.27□□□□□ -1.09
CSTF1-205ENST00000490539 ACTN4O43707 911 aaKnown RBP8.27□□□□□ -1.09
CSTF1-205ENST00000490539 SLC10A3P09131 477 aa8.27□□□□□ -1.09
CSTF1-205ENST00000490539 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
CSTF1-205ENST00000490539 ANKLE1Q8NAG6 615 aa8.26□□□□□ -1.09
CSTF1-205ENST00000490539 FAM187AA6NFU0 413 aa8.25□□□□□ -1.09
CSTF1-205ENST00000490539 GCGRP47871 477 aa8.25□□□□□ -1.09
CSTF1-205ENST00000490539 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
CSTF1-205ENST00000490539 FAM217BQ9NTX9 383 aaPredicted RBP8.25□□□□□ -1.09
CSTF1-205ENST00000490539 NR1I2O75469 434 aa8.24□□□□□ -1.09
CSTF1-205ENST00000490539 CD46P15529 392 aa8.24□□□□□ -1.09
CSTF1-205ENST00000490539 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
CSTF1-205ENST00000490539 PDE4DQ08499 809 aa8.24□□□□□ -1.09
CSTF1-205ENST00000490539 TPRNQ4KMQ1 711 aa8.24□□□□□ -1.09
CSTF1-205ENST00000490539 ZNF697Q5TEC3 545 aa8.24□□□□□ -1.09
CSTF1-205ENST00000490539 ERCC6L2Q5T890 1561 aa8.23□□□□□ -1.09
CSTF1-205ENST00000490539 RSF1Q96T23 1441 aaPredicted RBP8.23□□□□□ -1.09
CSTF1-205ENST00000490539 TREML4Q6UXN2 200 aa8.23□□□□□ -1.09
CSTF1-205ENST00000490539 GIGYF2Q6Y7W6 1299 aaKnown RBP8.23□□□□□ -1.09
CSTF1-205ENST00000490539 NUTM1Q86Y26 1132 aa8.23□□□□□ -1.09
CSTF1-205ENST00000490539 TLL1O43897 1013 aa8.22□□□□□ -1.09
CSTF1-205ENST00000490539 ATP6V1AP38606 617 aa8.22□□□□□ -1.09
CSTF1-205ENST00000490539 USP46P62068 366 aa8.22□□□□□ -1.09
CSTF1-205ENST00000490539 TNFRSF10AO00220 468 aa8.21□□□□□ -1.1
CSTF1-205ENST00000490539 KDM4AO75164 1064 aa8.21□□□□□ -1.1
CSTF1-205ENST00000490539 DIXDC1Q155Q3 683 aa8.21□□□□□ -1.1
CSTF1-205ENST00000490539 LIAT1Q6ZQX7 453 aa8.21□□□□□ -1.1
CSTF1-205ENST00000490539 ARAP1Q96P48 1450 aa8.2□□□□□ -1.1
CSTF1-205ENST00000490539 PPEF1O14829 653 aaPredicted RBP8.2□□□□□ -1.1
CSTF1-205ENST00000490539 GDF9O60383 454 aa8.2□□□□□ -1.1
CSTF1-205ENST00000490539 S1PR4O95977 384 aa8.2□□□□□ -1.1
CSTF1-205ENST00000490539 FUT2Q10981 343 aa8.2□□□□□ -1.1
CSTF1-205ENST00000490539 PARP9Q8IXQ6 854 aa8.2□□□□□ -1.1
CSTF1-205ENST00000490539 WIZO95785 1651 aa8.2□□□□□ -1.1
CSTF1-205ENST00000490539 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
CSTF1-205ENST00000490539 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
CSTF1-205ENST00000490539 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
CSTF1-205ENST00000490539 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
CSTF1-205ENST00000490539 Q3C1V9 767 aa8.17□□□□□ -1.1
CSTF1-205ENST00000490539 PUS10Q3MIT2 529 aaKnown RBP8.17□□□□□ -1.1
CSTF1-205ENST00000490539 BEGAINQ9BUH8 593 aa8.17□□□□□ -1.1
CSTF1-205ENST00000490539 DISP3Q9P2K9 1392 aa8.17□□□□□ -1.1
CSTF1-205ENST00000490539 ADH1BP00325 375 aa8.16□□□□□ -1.1
CSTF1-205ENST00000490539 SCUBE3Q8IX30 993 aa8.16□□□□□ -1.1
CSTF1-205ENST00000490539 TOP2AP11388 1531 aaKnown RBP8.15□□□□□ -1.1
CSTF1-205ENST00000490539 FMNL1O95466 1100 aaPredicted RBP8.15□□□□□ -1.1
CSTF1-205ENST00000490539 MORN1Q5T089 497 aa8.15□□□□□ -1.1
CSTF1-205ENST00000490539 LAMC3Q9Y6N6 1575 aa8.14□□□□□ -1.11
CSTF1-205ENST00000490539 PDS5BQ9NTI5 1447 aa8.14□□□□□ -1.11
CSTF1-205ENST00000490539 CADPSQ9ULU8 1353 aa8.13□□□□□ -1.11
CSTF1-205ENST00000490539 SUPT5HO00267 1087 aaKnown RBP8.13□□□□□ -1.11
CSTF1-205ENST00000490539 SPSB2Q99619 263 aa8.13□□□□□ -1.11
CSTF1-205ENST00000490539 SLC6A16Q9GZN6 736 aa8.13□□□□□ -1.11
CSTF1-205ENST00000490539 SLC27A5Q9Y2P5 690 aa8.13□□□□□ -1.11
CSTF1-205ENST00000490539 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
CSTF1-205ENST00000490539 HOXA2O43364 376 aa8.12□□□□□ -1.11
CSTF1-205ENST00000490539 MS4A1P11836 297 aa8.12□□□□□ -1.11
CSTF1-205ENST00000490539 SPIRE2Q8WWL2 714 aa8.12□□□□□ -1.11
CSTF1-205ENST00000490539 RSPH6AQ9H0K4 717 aa8.12□□□□□ -1.11
CSTF1-205ENST00000490539 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 HECW2Q9P2P5 1572 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 WFS1O76024 890 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 FOXC1Q12948 553 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 PLA2G2CQ5R387 149 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 DDRGK1Q96HY6 314 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
CSTF1-205ENST00000490539 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
CSTF1-205ENST00000490539 PKD2L1Q9P0L9 805 aa8.1□□□□□ -1.11
CSTF1-205ENST00000490539 FDX1P10109 184 aa8.09□□□□□ -1.11
CSTF1-205ENST00000490539 GJA5P36382 358 aa8.09□□□□□ -1.11
CSTF1-205ENST00000490539 GPBP1L1Q9HC44 474 aaPredicted RBP8.09□□□□□ -1.11
CSTF1-205ENST00000490539 STK17AQ9UEE5 414 aa8.09□□□□□ -1.11
CSTF1-205ENST00000490539 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-205ENST00000490539 BRICD5Q6PL45 260 aa8.08□□□□□ -1.12
CSTF1-205ENST00000490539 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-205ENST00000490539 C6orf229H3BNL8 230 aa8.07□□□□□ -1.12
CSTF1-205ENST00000490539 AXIN1O15169 862 aa8.07□□□□□ -1.12
CSTF1-205ENST00000490539 AVPP01185 164 aa8.07□□□□□ -1.12
CSTF1-205ENST00000490539 USB1Q9BQ65 265 aaKnown RBP8.07□□□□□ -1.12
CSTF1-205ENST00000490539 DACH1Q9UI36 760 aa8.07□□□□□ -1.12
CSTF1-205ENST00000490539 MOXD2PA6NHM9 499 aa8.06□□□□□ -1.12
CSTF1-205ENST00000490539 THAP11Q96EK4 314 aa8.06□□□□□ -1.12
CSTF1-205ENST00000490539 GMPR2Q9P2T1 348 aaKnown RBP8.06□□□□□ -1.12
CSTF1-205ENST00000490539 CFTRP13569 1480 aa8.06□□□□□ -1.12
CSTF1-205ENST00000490539 WDR62O43379 1518 aa8.05□□□□□ -1.12
CSTF1-205ENST00000490539 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
CSTF1-205ENST00000490539 RPIAP49247 311 aa8.05□□□□□ -1.12
CSTF1-205ENST00000490539 INSM1Q01101 510 aaPredicted RBP8.05□□□□□ -1.12
CSTF1-205ENST00000490539 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms