RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
CRNKL1-203ENST00000490258 ZBTB24O43167 697 aaPredicted RBP6.6□□□□□ -1.35
CRNKL1-203ENST00000490258 GPAT2Q6NUI2 795 aa6.6□□□□□ -1.35
CRNKL1-203ENST00000490258 MRGPRX2Q96LB1 330 aa6.6□□□□□ -1.35
CRNKL1-203ENST00000490258 PSMG3-AS1Q96PY0 264 aa6.6□□□□□ -1.35
CRNKL1-203ENST00000490258 NPDC1Q9NQX5 325 aaPredicted RBP6.6□□□□□ -1.35
CRNKL1-203ENST00000490258 TMEM134Q9H6X4 195 aa6.59□□□□□ -1.35
CRNKL1-203ENST00000490258 MLLT3P42568 568 aaPredicted RBP6.58□□□□□ -1.36
CRNKL1-203ENST00000490258 CCDC180Q9P1Z9 1646 aa6.58□□□□□ -1.36
CRNKL1-203ENST00000490258 VSIG8P0DPA2 414 aa6.57□□□□□ -1.36
CRNKL1-203ENST00000490258 WDR70Q9NW82 654 aa6.57□□□□□ -1.36
CRNKL1-203ENST00000490258 SLC10A3P09131 477 aa6.56□□□□□ -1.36
CRNKL1-203ENST00000490258 PUS10Q3MIT2 529 aaKnown RBP6.56□□□□□ -1.36
CRNKL1-203ENST00000490258 TRIM46Q7Z4K8 759 aa6.56□□□□□ -1.36
CRNKL1-203ENST00000490258 KRTAP1-3Q8IUG1 177 aa6.56□□□□□ -1.36
CRNKL1-203ENST00000490258 DNMT3AQ9Y6K1 912 aaPredicted RBP6.56□□□□□ -1.36
CRNKL1-203ENST00000490258 BMP1P13497 986 aa6.55□□□□□ -1.36
CRNKL1-203ENST00000490258 REPIN1Q9BWE0 567 aaKnown RBP6.55□□□□□ -1.36
CRNKL1-203ENST00000490258 HAP1P54257 671 aaPredicted RBP6.53□□□□□ -1.36
CRNKL1-203ENST00000490258 TRIM32Q13049 653 aa6.53□□□□□ -1.36
CRNKL1-203ENST00000490258 ADAMTS8Q9UP79 889 aa6.53□□□□□ -1.36
CRNKL1-203ENST00000490258 SEMA3EO15041 775 aa6.52□□□□□ -1.37
CRNKL1-203ENST00000490258 FOXK2Q01167 660 aa6.52□□□□□ -1.37
CRNKL1-203ENST00000490258 FAM160A2Q8N612 972 aaPredicted RBP6.52□□□□□ -1.37
CRNKL1-203ENST00000490258 RBM46Q8TBY0 533 aaKnown RBP6.52□□□□□ -1.37
CRNKL1-203ENST00000490258 THAP11Q96EK4 314 aa6.52□□□□□ -1.37
CRNKL1-203ENST00000490258 TESPA1A2RU30 521 aaPredicted RBP6.51□□□□□ -1.37
CRNKL1-203ENST00000490258 P3H3Q8IVL6 736 aa6.51□□□□□ -1.37
CRNKL1-203ENST00000490258 RCCD1A6NED2 376 aa6.5□□□□□ -1.37
CRNKL1-203ENST00000490258 GPR37O15354 613 aa6.5□□□□□ -1.37
CRNKL1-203ENST00000490258 ADAM23O75077 832 aa6.5□□□□□ -1.37
CRNKL1-203ENST00000490258 VSIG10Q8N0Z9 540 aa6.5□□□□□ -1.37
CRNKL1-203ENST00000490258 PRDM9Q9NQV7 894 aa6.5□□□□□ -1.37
CRNKL1-203ENST00000490258 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
CRNKL1-203ENST00000490258 FMNL1O95466 1100 aaPredicted RBP6.48□□□□□ -1.37
CRNKL1-203ENST00000490258 ZFP42Q96MM3 310 aa6.48□□□□□ -1.37
CRNKL1-203ENST00000490258 ALDH1A1P00352 501 aa6.47□□□□□ -1.37
CRNKL1-203ENST00000490258 IRS1P35568 1242 aa6.46□□□□□ -1.38
CRNKL1-203ENST00000490258 MORN1Q5T089 497 aa6.46□□□□□ -1.38
CRNKL1-203ENST00000490258 RC3H1Q5TC82 1133 aaKnown RBP6.46□□□□□ -1.38
CRNKL1-203ENST00000490258 ADGRG1Q9Y653 693 aa6.46□□□□□ -1.38
CRNKL1-203ENST00000490258 PTGDRQ13258 359 aa6.45□□□□□ -1.38
CRNKL1-203ENST00000490258 RSPH4AQ5TD94 716 aa6.44□□□□□ -1.38
CRNKL1-203ENST00000490258 MSS51Q4VC12 460 aa6.43□□□□□ -1.38
CRNKL1-203ENST00000490258 KANK3Q6NY19 840 aa6.43□□□□□ -1.38
CRNKL1-203ENST00000490258 SALL2Q9Y467 1007 aaPredicted RBP6.43□□□□□ -1.38
CRNKL1-203ENST00000490258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.42□□□□□ -1.38
CRNKL1-203ENST00000490258 FECHP22830 423 aa6.42□□□□□ -1.38
CRNKL1-203ENST00000490258 SLC27A5Q9Y2P5 690 aa6.42□□□□□ -1.38
CRNKL1-203ENST00000490258 WNT7BP56706 349 aa6.41□□□□□ -1.38
CRNKL1-203ENST00000490258 SKOR1P84550 965 aa6.41□□□□□ -1.38
CRNKL1-203ENST00000490258 RBM26Q5T8P6 1007 aaKnown RBP6.41□□□□□ -1.38
CRNKL1-203ENST00000490258 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
CRNKL1-203ENST00000490258 BRICD5Q6PL45 260 aa6.41□□□□□ -1.38
CRNKL1-203ENST00000490258 SOBPA7XYQ1 873 aa6.4□□□□□ -1.38
CRNKL1-203ENST00000490258 Q8N3U1 123 aa6.4□□□□□ -1.38
CRNKL1-203ENST00000490258 MSTNO14793 375 aa6.39□□□□□ -1.39
CRNKL1-203ENST00000490258 ATP6V1AP38606 617 aa6.39□□□□□ -1.39
CRNKL1-203ENST00000490258 FUT2Q10981 343 aa6.39□□□□□ -1.39
CRNKL1-203ENST00000490258 FAM161AQ3B820 660 aa6.39□□□□□ -1.39
CRNKL1-203ENST00000490258 WASF2Q9Y6W5 498 aa6.39□□□□□ -1.39
CRNKL1-203ENST00000490258 KRT76Q01546 638 aa6.38□□□□□ -1.39
CRNKL1-203ENST00000490258 ZNF385CQ66K41 422 aaPredicted RBP6.38□□□□□ -1.39
CRNKL1-203ENST00000490258 CNTNAP3BQ96NU0 1288 aa6.38□□□□□ -1.39
CRNKL1-203ENST00000490258 CNTNAP3Q9BZ76 1288 aa6.38□□□□□ -1.39
CRNKL1-203ENST00000490258 SIAH2O43255 324 aa6.37□□□□□ -1.39
CRNKL1-203ENST00000490258 PPFIA3O75145 1194 aa6.37□□□□□ -1.39
CRNKL1-203ENST00000490258 MMP16P51512 607 aa6.37□□□□□ -1.39
CRNKL1-203ENST00000490258 SCARF1Q14162 830 aa6.37□□□□□ -1.39
CRNKL1-203ENST00000490258 MRPL14Q6P1L8 145 aaKnown RBP6.37□□□□□ -1.39
CRNKL1-203ENST00000490258 SVOPQ8N4V2 548 aa6.37□□□□□ -1.39
CRNKL1-203ENST00000490258 RNF19BQ6ZMZ0 732 aa6.36□□□□□ -1.39
CRNKL1-203ENST00000490258 PURBQ96QR8 312 aaKnown RBP6.36□□□□□ -1.39
CRNKL1-203ENST00000490258 ABCC9O60706 1549 aa6.35□□□□□ -1.39
CRNKL1-203ENST00000490258 MARSP56192 900 aaKnown RBP6.35□□□□□ -1.39
CRNKL1-203ENST00000490258 SCARF2Q96GP6 870 aaPredicted RBP6.35□□□□□ -1.39
CRNKL1-203ENST00000490258 SPOCK3Q9BQ16 436 aa6.35□□□□□ -1.39
CRNKL1-203ENST00000490258 FCHSD2O94868 740 aa6.34□□□□□ -1.39
CRNKL1-203ENST00000490258 ARHGEF15O94989 841 aa6.33□□□□□ -1.4
CRNKL1-203ENST00000490258 HIC1Q14526 733 aa6.33□□□□□ -1.4
CRNKL1-203ENST00000490258 PLA2G4EQ3MJ16 856 aa6.33□□□□□ -1.4
CRNKL1-203ENST00000490258 NUTM2FA1L443 756 aa6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 SLC24A1O60721 1099 aa6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 CCDC24Q8N4L8 307 aa6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 GPR161Q8N6U8 529 aaKnown RBP6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 RDH13Q8NBN7 331 aa6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 EHBP1Q8NDI1 1231 aa6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 PHOX2BQ99453 314 aa6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 KRTAP4-12Q9BQ66 201 aa6.32□□□□□ -1.4
CRNKL1-203ENST00000490258 K7ELQ4 463 aaPredicted RBP6.31□□□□□ -1.4
CRNKL1-203ENST00000490258 GNPATO15228 680 aa6.31□□□□□ -1.4
CRNKL1-203ENST00000490258 MAN1A2O60476 641 aa6.31□□□□□ -1.4
CRNKL1-203ENST00000490258 DXOO77932 396 aaKnown RBP6.31□□□□□ -1.4
CRNKL1-203ENST00000490258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.31□□□□□ -1.4
CRNKL1-203ENST00000490258 PXYLP1Q8TE99 480 aa6.31□□□□□ -1.4
CRNKL1-203ENST00000490258 BTBD11A6QL63 1104 aa6.3□□□□□ -1.4
CRNKL1-203ENST00000490258 METTL3Q86U44 580 aaKnown RBP6.3□□□□□ -1.4
CRNKL1-203ENST00000490258 WHAMMQ8TF30 809 aa6.3□□□□□ -1.4
CRNKL1-203ENST00000490258 KRTAP9-9Q9BYP9 154 aa6.3□□□□□ -1.4
CRNKL1-203ENST00000490258 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms