RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 SHPRHQ149N8 1683 aa16.14■□□□□ 0.18
UBP1-211ENST00000490112 NAIPQ13075 1403 aa16.13■□□□□ 0.17
UBP1-211ENST00000490112 KIF1BO60333 1816 aa16.13■□□□□ 0.17
UBP1-211ENST00000490112 METP08581 1390 aa16.13■□□□□ 0.17
UBP1-211ENST00000490112 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
UBP1-211ENST00000490112 EVX2Q03828 476 aa16.12■□□□□ 0.17
UBP1-211ENST00000490112 CLTCL1P53675 1640 aa16.12■□□□□ 0.17
UBP1-211ENST00000490112 NEXMIFQ5QGS0 1516 aa16.11■□□□□ 0.17
UBP1-211ENST00000490112 ASXL1Q8IXJ9 1541 aa16.1■□□□□ 0.17
UBP1-211ENST00000490112 LRP6O75581 1613 aa16.1■□□□□ 0.17
UBP1-211ENST00000490112 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
UBP1-211ENST00000490112 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
UBP1-211ENST00000490112 RPGRIP1LQ68CZ1 1315 aa16.1■□□□□ 0.17
UBP1-211ENST00000490112 MST1RQ04912 1400 aa16.1■□□□□ 0.17
UBP1-211ENST00000490112 SETD5Q9C0A6 1442 aa16.1■□□□□ 0.17
UBP1-211ENST00000490112 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
UBP1-211ENST00000490112 TRIM52Q96A61 297 aa16.09■□□□□ 0.17
UBP1-211ENST00000490112 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
UBP1-211ENST00000490112 NHSL1Q5SYE7 1610 aa16.07■□□□□ 0.16
UBP1-211ENST00000490112 PTCH1Q13635 1447 aa16.05■□□□□ 0.16
UBP1-211ENST00000490112 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
UBP1-211ENST00000490112 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
UBP1-211ENST00000490112 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
UBP1-211ENST00000490112 RXRBP28702 533 aa16.05■□□□□ 0.16
UBP1-211ENST00000490112 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
UBP1-211ENST00000490112 NALCNQ8IZF0 1738 aa16.03■□□□□ 0.16
UBP1-211ENST00000490112 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
UBP1-211ENST00000490112 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
UBP1-211ENST00000490112 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.16
UBP1-211ENST00000490112 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
UBP1-211ENST00000490112 C1orf167Q5SNV9 1468 aa16.02■□□□□ 0.15
UBP1-211ENST00000490112 CDK12Q9NYV4 1490 aaPredicted RBP16.02■□□□□ 0.15
UBP1-211ENST00000490112 AFF2P51816 1311 aa16.01■□□□□ 0.15
UBP1-211ENST00000490112 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
UBP1-211ENST00000490112 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
UBP1-211ENST00000490112 LAMC1P11047 1609 aa15.99■□□□□ 0.15
UBP1-211ENST00000490112 ROBO2Q9HCK4 1378 aa15.99■□□□□ 0.15
UBP1-211ENST00000490112 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
UBP1-211ENST00000490112 PPLO60437 1756 aa15.98■□□□□ 0.15
UBP1-211ENST00000490112 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
UBP1-211ENST00000490112 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
UBP1-211ENST00000490112 C8orf37Q96NL8 207 aa15.97■□□□□ 0.15
UBP1-211ENST00000490112 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
UBP1-211ENST00000490112 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
UBP1-211ENST00000490112 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
UBP1-211ENST00000490112 DDX17Q92841 729 aaKnown RBP15.96■□□□□ 0.15
UBP1-211ENST00000490112 QTRT2Q9H974 415 aaKnown RBP15.96■□□□□ 0.15
UBP1-211ENST00000490112 NGLY1Q96IV0 654 aa15.95■□□□□ 0.14
UBP1-211ENST00000490112 ORAI2Q96SN7 254 aa15.94■□□□□ 0.14
UBP1-211ENST00000490112 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
UBP1-211ENST00000490112 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
UBP1-211ENST00000490112 NPHP3Q7Z494 1330 aa15.93■□□□□ 0.14
UBP1-211ENST00000490112 ADAMTS2O95450 1211 aa15.92■□□□□ 0.14
UBP1-211ENST00000490112 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
UBP1-211ENST00000490112 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
UBP1-211ENST00000490112 MPHOSPH9Q99550 1183 aa15.91■□□□□ 0.14
UBP1-211ENST00000490112 RGL3Q3MIN7 710 aa15.9■□□□□ 0.14
UBP1-211ENST00000490112 ESCO1Q5FWF5 840 aa15.9■□□□□ 0.14
UBP1-211ENST00000490112 TECPR2O15040 1411 aa15.9■□□□□ 0.14
UBP1-211ENST00000490112 SPATA31E1Q6ZUB1 1445 aa15.9■□□□□ 0.14
UBP1-211ENST00000490112 ADGRF5Q8IZF2 1346 aa15.9■□□□□ 0.14
UBP1-211ENST00000490112 USP21Q9UK80 565 aa15.89■□□□□ 0.13
UBP1-211ENST00000490112 ABCC11Q96J66 1382 aa15.88■□□□□ 0.13
UBP1-211ENST00000490112 COL22A1Q8NFW1 1626 aaPredicted RBP15.88■□□□□ 0.13
UBP1-211ENST00000490112 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
UBP1-211ENST00000490112 TRPC5Q9UL62 973 aaPredicted RBP15.88■□□□□ 0.13
UBP1-211ENST00000490112 RGS12O14924 1447 aa15.87■□□□□ 0.13
UBP1-211ENST00000490112 STK26Q9P289 416 aa15.87■□□□□ 0.13
UBP1-211ENST00000490112 IFT172Q9UG01 1749 aa15.86■□□□□ 0.13
UBP1-211ENST00000490112 SIRT1Q96EB6 747 aa15.86■□□□□ 0.13
UBP1-211ENST00000490112 PIK3C2GO75747 1445 aa15.85■□□□□ 0.13
UBP1-211ENST00000490112 KNDC1Q76NI1 1749 aa15.85■□□□□ 0.13
UBP1-211ENST00000490112 PXDNQ92626 1479 aa15.84■□□□□ 0.13
UBP1-211ENST00000490112 FOXO3O43524 673 aa15.84■□□□□ 0.13
UBP1-211ENST00000490112 WAPLQ7Z5K2 1190 aa15.84■□□□□ 0.13
UBP1-211ENST00000490112 ATAD2Q6PL18 1390 aa15.84■□□□□ 0.13
UBP1-211ENST00000490112 MYOM2P54296 1465 aa15.84■□□□□ 0.13
UBP1-211ENST00000490112 TMEM132EQ6IEE7 984 aa15.83■□□□□ 0.12
UBP1-211ENST00000490112 YTHDC2Q9H6S0 1430 aaKnown RBP15.83■□□□□ 0.12
UBP1-211ENST00000490112 ATRNO75882 1429 aa15.81■□□□□ 0.12
UBP1-211ENST00000490112 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
UBP1-211ENST00000490112 C14orf93Q9H972 538 aaKnown RBP15.81■□□□□ 0.12
UBP1-211ENST00000490112 KIF1AQ12756 1690 aa15.8■□□□□ 0.12
UBP1-211ENST00000490112 FMN2Q9NZ56 1722 aa15.8■□□□□ 0.12
UBP1-211ENST00000490112 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
UBP1-211ENST00000490112 EP400Q96L91 3159 aa15.79■□□□□ 0.12
UBP1-211ENST00000490112 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
UBP1-211ENST00000490112 PLEKHH1Q9ULM0 1364 aa15.78■□□□□ 0.12
UBP1-211ENST00000490112 SPATA31A3Q5VYP0 1347 aa15.78■□□□□ 0.12
UBP1-211ENST00000490112 GABBR2O75899 941 aa15.78■□□□□ 0.12
UBP1-211ENST00000490112 XPCQ01831 940 aaPredicted RBP15.78■□□□□ 0.12
UBP1-211ENST00000490112 PSME1Q06323 249 aa15.78■□□□□ 0.12
UBP1-211ENST00000490112 CCDC125Q86Z20 511 aa15.78■□□□□ 0.12
UBP1-211ENST00000490112 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
UBP1-211ENST00000490112 NRXN1Q9ULB1 1477 aa15.78■□□□□ 0.12
UBP1-211ENST00000490112 SRCAPQ6ZRS2 3230 aa15.76■□□□□ 0.11
UBP1-211ENST00000490112 KRT28Q7Z3Y7 464 aa15.76■□□□□ 0.11
UBP1-211ENST00000490112 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
UBP1-211ENST00000490112 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
UBP1-211ENST00000490112 UNC5CLQ8IV45 518 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms