RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
ERCC3-207ENST00000490062 FBXO41Q8TF61 875 aa24.87■■□□□ 1.57
ERCC3-207ENST00000490062 PRAM1Q96QH2 718 aa24.87■■□□□ 1.57
ERCC3-207ENST00000490062 C14orf37Q86TY3 774 aa24.83■■□□□ 1.57
ERCC3-207ENST00000490062 UBAP1LF5GYI3 381 aa24.82■■□□□ 1.56
ERCC3-207ENST00000490062 CARD11Q9BXL7 1154 aa24.82■■□□□ 1.56
ERCC3-207ENST00000490062 POGKQ9P215 609 aa24.82■■□□□ 1.56
ERCC3-207ENST00000490062 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
ERCC3-207ENST00000490062 ATF3P18847 181 aa24.81■■□□□ 1.56
ERCC3-207ENST00000490062 MST1RQ04912 1400 aa24.8■■□□□ 1.56
ERCC3-207ENST00000490062 CENPJQ9HC77 1338 aaPredicted RBP24.79■■□□□ 1.56
ERCC3-207ENST00000490062 SBNO2Q9Y2G9 1366 aa24.79■■□□□ 1.56
ERCC3-207ENST00000490062 SLAIN2Q9P270 581 aa24.78■■□□□ 1.56
ERCC3-207ENST00000490062 FMN2Q9NZ56 1722 aa24.77■■□□□ 1.56
ERCC3-207ENST00000490062 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
ERCC3-207ENST00000490062 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
ERCC3-207ENST00000490062 ANKARQ7Z5J8 1434 aa24.72■■□□□ 1.55
ERCC3-207ENST00000490062 SAFB2Q14151 953 aaKnown RBP eCLIP24.72■■□□□ 1.55
ERCC3-207ENST00000490062 MINK1Q8N4C8 1332 aaPredicted RBP24.7■■□□□ 1.54
ERCC3-207ENST00000490062 WASLO00401 505 aaPredicted RBP24.7■■□□□ 1.54
ERCC3-207ENST00000490062 TULP4Q9NRJ4 1543 aa24.7■■□□□ 1.54
ERCC3-207ENST00000490062 ROBO1Q9Y6N7 1651 aa24.69■■□□□ 1.54
ERCC3-207ENST00000490062 USP47Q96K76 1375 aa24.68■■□□□ 1.54
ERCC3-207ENST00000490062 SLC24A1O60721 1099 aa24.67■■□□□ 1.54
ERCC3-207ENST00000490062 USP32Q8NFA0 1604 aa24.66■■□□□ 1.54
ERCC3-207ENST00000490062 PIP4K2BP78356 416 aa24.65■■□□□ 1.54
ERCC3-207ENST00000490062 BRINP3Q76B58 766 aa24.65■■□□□ 1.54
ERCC3-207ENST00000490062 HIRIP3Q9BW71 556 aaPredicted RBP24.65■■□□□ 1.54
ERCC3-207ENST00000490062 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.54
ERCC3-207ENST00000490062 TESK2Q96S53 571 aa24.64■■□□□ 1.54
ERCC3-207ENST00000490062 ATP7BP35670 1465 aa24.63■■□□□ 1.53
ERCC3-207ENST00000490062 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
ERCC3-207ENST00000490062 EVC2Q86UK5 1308 aa24.61■■□□□ 1.53
ERCC3-207ENST00000490062 NHSL1Q5SYE7 1610 aa24.61■■□□□ 1.53
ERCC3-207ENST00000490062 PUS7Q96PZ0 661 aaKnown RBP24.61■■□□□ 1.53
ERCC3-207ENST00000490062 CDK19Q9BWU1 502 aa24.61■■□□□ 1.53
ERCC3-207ENST00000490062 KIF1AQ12756 1690 aa24.61■■□□□ 1.53
ERCC3-207ENST00000490062 PRR36Q9H6K5 1346 aa24.61■■□□□ 1.53
ERCC3-207ENST00000490062 ILDR1Q86SU0 546 aaPredicted RBP24.6■■□□□ 1.53
ERCC3-207ENST00000490062 RGPD8O14715 1765 aaPredicted RBP24.59■■□□□ 1.53
ERCC3-207ENST00000490062 TOPAZ1Q8N9V7 1692 aa24.59■■□□□ 1.53
ERCC3-207ENST00000490062 ITSN1Q15811 1721 aa24.58■■□□□ 1.53
ERCC3-207ENST00000490062 ORAI2Q96SN7 254 aa24.58■■□□□ 1.53
ERCC3-207ENST00000490062 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.52
ERCC3-207ENST00000490062 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
ERCC3-207ENST00000490062 NUDT16Q96DE0 195 aaKnown RBP24.56■■□□□ 1.52
ERCC3-207ENST00000490062 ESCO1Q5FWF5 840 aa24.55■■□□□ 1.52
ERCC3-207ENST00000490062 CCDC61Q9Y6R9 512 aa24.55■■□□□ 1.52
ERCC3-207ENST00000490062 NUTM2FA1L443 756 aa24.54■■□□□ 1.52
ERCC3-207ENST00000490062 ATAD2Q6PL18 1390 aa24.54■■□□□ 1.52
ERCC3-207ENST00000490062 COL16A1Q07092 1604 aaPredicted RBP24.53■■□□□ 1.52
ERCC3-207ENST00000490062 PHF8Q9UPP1 1060 aa24.53■■□□□ 1.52
ERCC3-207ENST00000490062 PLEKHG3A1L390 1219 aa24.52■■□□□ 1.52
ERCC3-207ENST00000490062 HSPA1LP34931 641 aa24.52■■□□□ 1.52
ERCC3-207ENST00000490062 ZEB1P37275 1124 aaPredicted RBP24.52■■□□□ 1.52
ERCC3-207ENST00000490062 SRPK2P78362 688 aaKnown RBP24.52■■□□□ 1.52
ERCC3-207ENST00000490062 SOS2Q07890 1332 aaPredicted RBP24.52■■□□□ 1.52
ERCC3-207ENST00000490062 NPHP3Q7Z494 1330 aa24.52■■□□□ 1.52
ERCC3-207ENST00000490062 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
ERCC3-207ENST00000490062 CABP2Q9NPB3 220 aa24.5■■□□□ 1.51
ERCC3-207ENST00000490062 POLR3AO14802 1390 aaPredicted RBP24.5■■□□□ 1.51
ERCC3-207ENST00000490062 HSPA5P11021 654 aaKnown RBP24.49■■□□□ 1.51
ERCC3-207ENST00000490062 PXDNQ92626 1479 aa24.49■■□□□ 1.51
ERCC3-207ENST00000490062 TMF1P82094 1093 aa24.48■■□□□ 1.51
ERCC3-207ENST00000490062 PPIP5K1Q6PFW1 1433 aa24.46■■□□□ 1.51
ERCC3-207ENST00000490062 DISP3Q9P2K9 1392 aa24.45■■□□□ 1.5
ERCC3-207ENST00000490062 NINLQ9Y2I6 1382 aa24.45■■□□□ 1.5
ERCC3-207ENST00000490062 FOXO3O43524 673 aa24.45■■□□□ 1.5
ERCC3-207ENST00000490062 CDCA8Q53HL2 280 aa24.45■■□□□ 1.5
ERCC3-207ENST00000490062 SBNO1A3KN83 1393 aa24.42■■□□□ 1.5
ERCC3-207ENST00000490062 BRD4O60885 1362 aaPredicted RBP24.42■■□□□ 1.5
ERCC3-207ENST00000490062 PMFBP1Q8TBY8 1022 aa24.42■■□□□ 1.5
ERCC3-207ENST00000490062 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
ERCC3-207ENST00000490062 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
ERCC3-207ENST00000490062 JCADQ9P266 1359 aa24.41■■□□□ 1.5
ERCC3-207ENST00000490062 SHPRHQ149N8 1683 aa24.4■■□□□ 1.5
ERCC3-207ENST00000490062 ACEP12821 1306 aa24.4■■□□□ 1.5
ERCC3-207ENST00000490062 CABP1Q9NZU7 370 aa24.4■■□□□ 1.5
ERCC3-207ENST00000490062 CPSF1Q10570 1443 aaKnown RBP24.4■■□□□ 1.5
ERCC3-207ENST00000490062 TRPM3Q9HCF6 1732 aaPredicted RBP24.4■■□□□ 1.5
ERCC3-207ENST00000490062 PSME1Q06323 249 aa24.39■■□□□ 1.49
ERCC3-207ENST00000490062 KRT28Q7Z3Y7 464 aa24.39■■□□□ 1.49
ERCC3-207ENST00000490062 NGDNQ8NEJ9 315 aaKnown RBP24.39■■□□□ 1.49
ERCC3-207ENST00000490062 ZNF692Q9BU19 519 aaPredicted RBP24.37■■□□□ 1.49
ERCC3-207ENST00000490062 AKAP12Q02952 1782 aa24.37■■□□□ 1.49
ERCC3-207ENST00000490062 SPATA31A3Q5VYP0 1347 aa24.36■■□□□ 1.49
ERCC3-207ENST00000490062 CD163L1Q9NR16 1453 aa24.36■■□□□ 1.49
ERCC3-207ENST00000490062 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
ERCC3-207ENST00000490062 SSH2Q76I76 1423 aa24.35■■□□□ 1.49
ERCC3-207ENST00000490062 COL22A1Q8NFW1 1626 aaPredicted RBP24.35■■□□□ 1.49
ERCC3-207ENST00000490062 PNPLA6Q8IY17 1366 aa24.35■■□□□ 1.49
ERCC3-207ENST00000490062 USP6P35125 1406 aa24.35■■□□□ 1.49
ERCC3-207ENST00000490062 ALS2Q96Q42 1657 aa24.34■■□□□ 1.49
ERCC3-207ENST00000490062 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.48
ERCC3-207ENST00000490062 MON2Q7Z3U7 1717 aa24.32■■□□□ 1.48
ERCC3-207ENST00000490062 MYOM1P52179 1685 aa24.32■■□□□ 1.48
ERCC3-207ENST00000490062 ARHGEF10O15013 1369 aa24.31■■□□□ 1.48
ERCC3-207ENST00000490062 XPCQ01831 940 aaPredicted RBP24.31■■□□□ 1.48
ERCC3-207ENST00000490062 SLC12A5Q9H2X9 1139 aa24.31■■□□□ 1.48
ERCC3-207ENST00000490062 NRKQ7Z2Y5 1582 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms