RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
LSAMP-205ENST00000490035 ARHGAP5Q13017 1502 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 RALYLQ86SE5 291 aaKnown RBP10.67□□□□□ -0.7
LSAMP-205ENST00000490035 CCDC39Q9UFE4 941 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 CUL7Q14999 1698 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 CNTROBQ8N137 903 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 HSP90B2PQ58FF3 399 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 RIPK4P57078 832 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 SART3Q15020 963 aaKnown RBP10.67□□□□□ -0.7
LSAMP-205ENST00000490035 IL27Q8NEV9 243 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 CRBNQ96SW2 442 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 ANO2Q9NQ90 1003 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 HOMER1Q86YM7 354 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 GNAI3P08754 354 aa10.67□□□□□ -0.7
LSAMP-205ENST00000490035 MRE11P49959 708 aa10.66□□□□□ -0.7
LSAMP-205ENST00000490035 BICD2Q8TD16 824 aa10.66□□□□□ -0.7
LSAMP-205ENST00000490035 ZNF428Q96B54 188 aa10.66□□□□□ -0.7
LSAMP-205ENST00000490035 ANKRD50Q9ULJ7 1429 aa10.66□□□□□ -0.7
LSAMP-205ENST00000490035 CAVIN1Q6NZI2 390 aaKnown RBP10.66□□□□□ -0.7
LSAMP-205ENST00000490035 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
LSAMP-205ENST00000490035 ANKRD1Q15327 319 aa10.66□□□□□ -0.7
LSAMP-205ENST00000490035 HMGN5P82970 282 aaKnown RBP10.65□□□□□ -0.7
LSAMP-205ENST00000490035 CCDC43Q96MW1 224 aaKnown RBP10.65□□□□□ -0.7
LSAMP-205ENST00000490035 CWC22Q9HCG8 908 aaKnown RBP10.65□□□□□ -0.7
LSAMP-205ENST00000490035 CDC45O75419 566 aa10.65□□□□□ -0.7
LSAMP-205ENST00000490035 PSME1Q06323 249 aa10.65□□□□□ -0.7
LSAMP-205ENST00000490035 SLC3A2P08195 630 aaKnown RBP10.65□□□□□ -0.7
LSAMP-205ENST00000490035 LUC7LQ9NQ29 371 aaKnown RBP10.65□□□□□ -0.7
LSAMP-205ENST00000490035 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
LSAMP-205ENST00000490035 RRP12Q5JTH9 1297 aaKnown RBP10.65□□□□□ -0.7
LSAMP-205ENST00000490035 PDE3AQ14432 1141 aa10.65□□□□□ -0.71
LSAMP-205ENST00000490035 GCC1Q96CN9 775 aa10.65□□□□□ -0.71
LSAMP-205ENST00000490035 GRIN2BQ13224 1484 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 FAM43AQ8N2R8 423 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 SMARCE1Q969G3 411 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 CCDC30Q5VVM6 783 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 C22orf23Q9BZE7 217 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 DAPK1P53355 1430 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 APPP05067 770 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 TOP2BQ02880 1626 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 JMYQ8N9B5 988 aa10.64□□□□□ -0.71
LSAMP-205ENST00000490035 TXLNAP40222 546 aa10.63□□□□□ -0.71
LSAMP-205ENST00000490035 NFXL1Q6ZNB6 911 aa10.63□□□□□ -0.71
LSAMP-205ENST00000490035 CCAR2Q8N163 923 aaKnown RBP10.63□□□□□ -0.71
LSAMP-205ENST00000490035 FKBP5Q13451 457 aaPredicted RBP10.63□□□□□ -0.71
LSAMP-205ENST00000490035 EPS15P42566 896 aa10.63□□□□□ -0.71
LSAMP-205ENST00000490035 SRCIN1Q9C0H9 1055 aa10.63□□□□□ -0.71
LSAMP-205ENST00000490035 NCOA2Q15596 1464 aa10.63□□□□□ -0.71
LSAMP-205ENST00000490035 ODF2Q5BJF6 829 aa10.63□□□□□ -0.71
LSAMP-205ENST00000490035 ZNF771Q7L3S4 317 aaPredicted RBP10.63□□□□□ -0.71
LSAMP-205ENST00000490035 COG6Q9Y2V7 657 aa10.63□□□□□ -0.71
LSAMP-205ENST00000490035 RABEP1Q15276 862 aa10.62□□□□□ -0.71
LSAMP-205ENST00000490035 APAF1O14727 1248 aa10.62□□□□□ -0.71
LSAMP-205ENST00000490035 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 LTV1Q96GA3 475 aaPredicted RBP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 CALRP27797 417 aaKnown RBP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 MNS1Q8NEH6 495 aa10.62□□□□□ -0.71
LSAMP-205ENST00000490035 RAPGEF4Q8WZA2 1011 aa10.62□□□□□ -0.71
LSAMP-205ENST00000490035 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
LSAMP-205ENST00000490035 ZNF396Q96N95 335 aaPredicted RBP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 NCBP3Q53F19 620 aaKnown RBP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 PNISRQ8TF01 805 aaKnown RBP10.62□□□□□ -0.71
LSAMP-205ENST00000490035 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
LSAMP-205ENST00000490035 TSPYL4Q9UJ04 414 aa10.62□□□□□ -0.71
LSAMP-205ENST00000490035 TBC1D2BQ9UPU7 963 aa10.61□□□□□ -0.71
LSAMP-205ENST00000490035 UBTFL1P0CB47 393 aaPredicted RBP10.61□□□□□ -0.71
LSAMP-205ENST00000490035 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
LSAMP-205ENST00000490035 CCDC66A2RUB6 948 aa10.61□□□□□ -0.71
LSAMP-205ENST00000490035 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
LSAMP-205ENST00000490035 GPRASP1Q5JY77 1395 aa10.6□□□□□ -0.71
LSAMP-205ENST00000490035 EXOC6Q8TAG9 804 aa10.6□□□□□ -0.71
LSAMP-205ENST00000490035 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
LSAMP-205ENST00000490035 R3HCC1Q9Y3T6 440 aaKnown RBP10.6□□□□□ -0.71
LSAMP-205ENST00000490035 KINO60870 393 aaKnown RBP10.6□□□□□ -0.71
LSAMP-205ENST00000490035 CT47A1Q5JQC4 288 aaPredicted RBP10.6□□□□□ -0.71
LSAMP-205ENST00000490035 NASPP49321 788 aaPredicted RBP10.6□□□□□ -0.71
LSAMP-205ENST00000490035 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
LSAMP-205ENST00000490035 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
LSAMP-205ENST00000490035 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
LSAMP-205ENST00000490035 KAT6BQ8WYB5 2073 aa10.59□□□□□ -0.71
LSAMP-205ENST00000490035 ZRSR2Q15696 482 aaKnown RBP10.59□□□□□ -0.71
LSAMP-205ENST00000490035 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
LSAMP-205ENST00000490035 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
LSAMP-205ENST00000490035 CCT4P50991 539 aaKnown RBP10.59□□□□□ -0.71
LSAMP-205ENST00000490035 RIC3Q7Z5B4 369 aa10.59□□□□□ -0.71
LSAMP-205ENST00000490035 TIAM1Q13009 1591 aa10.59□□□□□ -0.71
LSAMP-205ENST00000490035 HMGXB3Q12766 1538 aa10.59□□□□□ -0.71
LSAMP-205ENST00000490035 ATF3P18847 181 aa10.59□□□□□ -0.71
LSAMP-205ENST00000490035 ERLIN2O94905 339 aa10.58□□□□□ -0.72
LSAMP-205ENST00000490035 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.58□□□□□ -0.72
LSAMP-205ENST00000490035 CCDC141Q6ZP82 1450 aa10.58□□□□□ -0.72
LSAMP-205ENST00000490035 WDR63Q8IWG1 891 aa10.58□□□□□ -0.72
LSAMP-205ENST00000490035 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
LSAMP-205ENST00000490035 IGF1RP08069 1367 aa10.58□□□□□ -0.72
LSAMP-205ENST00000490035 ZSCAN25Q6NSZ9 544 aa10.58□□□□□ -0.72
LSAMP-205ENST00000490035 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
LSAMP-205ENST00000490035 OFD1O75665 1012 aa10.58□□□□□ -0.72
LSAMP-205ENST00000490035 CAGE1Q8TC20 777 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms